Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UPB1

Gene Name Gene ID Reads Annotation
UPB1 ENSGALG00000006627 139 beta-ureidopropionase 1 [Source:HGNC Symbol;Acc:HGNC:16297]











Genes with expression patterns similar to UPB1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UPB1 ENSGALG00000006627 139 9 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 beta-ureidopropionase 1 [Source:HGNC Symbol;Acc:HGNC:16297]
2. ENSGALG00000028652 ENSGALG00000028652 65 2.32 - - 0.735 0.725 0.860 - - - - -
3. RREB1 ENSGALG00000012799 125 1.749 - - - - 0.943 - - - 0.806 - ras responsive element binding protein 1 [Source:NCBI gene;Acc:395920]
4. B3GAT2 ENSGALG00000031590 615 1.723 - - - 0.964 - - - - 0.759 - beta-1,3-glucuronyltransferase 2 [Source:NCBI gene;Acc:428638]
5. C3orf58 ENSGALG00000002347 27 1.711 - - 0.831 - 0.880 - - - - - chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
6. NCF1 ENSGALG00000001189 334 1.571 - - - - - - - 0.764 0.807 - neutrophil cytosolic factor 1 [Source:NCBI gene;Acc:417485]
7. gga-mir-454 ENSGALG00000033526 22 1.553 - - - 0.719 - - - 0.834 - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
8. ITGB1BP2 ENSGALG00000005493 628 1.539 - - - - - - - 0.750 0.789 - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
9. PPP2CA_1 ENSGALG00000006462 3170 1.506 - - - - - - - 0.784 0.722 - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
10. GRPEL2 ENSGALG00000002673 105 1.496 - - - - 0.764 - - 0.732 - - GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
11. EPB42 ENSGALG00000021230 20 1.485 - - - - 0.748 0.737 - - - - Gallus gallus erythrocyte membrane protein band 4.2 (EPB42), mRNA. [Source:RefSeq mRNA;Acc:NM_001321559]
12. CP ENSGALG00000030773 119 1.446 - - - 0.741 - - - 0.705 - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
13. ZP2 ENSGALG00000002428 10 0.973 - - - - 0.973 - - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
14. GABRG1 ENSGALG00000020143 5 0.954 - - 0.954 - - - - - - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:HGNC Symbol;Acc:HGNC:4086]
15. GIF ENSGALG00000031546 2 0.954 - - 0.954 - - - - - - - gastric intrinsic factor [Source:HGNC Symbol;Acc:HGNC:4268]
16. MYRFL ENSGALG00000019352 2 0.954 - - 0.954 - - - - - - - myelin regulatory factor like [Source:HGNC Symbol;Acc:HGNC:26316]
17. CSF3R ENSGALG00000002112 2 0.954 - - 0.954 - - - - - - - colony stimulating factor 3 receptor [Source:NCBI gene;Acc:419620]
18. ENSGALG00000009969 ENSGALG00000009969 2 0.954 - - 0.954 - - - - - - -
19. VCAM1 ENSGALG00000005257 102 0.954 - - 0.954 - - - - - - - vascular cell adhesion molecule 1, transcript variant X1
20. TAPP2 TAPP2 2 0.954 - - 0.954 - - - - - - -
21. DOK4 ENSGALG00000001160 2 0.954 - - 0.954 - - - - - - - docking protein 4 [Source:HGNC Symbol;Acc:HGNC:19868]
22. RHCG ENSGALG00000006635 7 0.954 - - 0.954 - - - - - - - Rh family C glycoprotein [Source:NCBI gene;Acc:415490]
23. PABPC1L ENSGALG00000004123 2 0.954 - - 0.954 - - - - - - - poly(A) binding protein cytoplasmic 1 like [Source:HGNC Symbol;Acc:HGNC:15797]
24. PDE1A ENSGALG00000008885 4 0.954 - - 0.954 - - - - - - - phosphodiesterase 1A [Source:HGNC Symbol;Acc:HGNC:8774]
25. AGRP ENSGALG00000002244 27 0.954 - - 0.954 - - - - - - - agouti related neuropeptide [Source:NCBI gene;Acc:427535]
26. NUDT6 ENSGALG00000011834 1309 0.932 - - - - - - - - 0.932 - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
27. ACL ACL 1813 0.925 - - - - - - - - 0.925 -
28. SGK1 ENSGALG00000013971 2608 0.917 - - - - - - - - 0.917 - serum/glucocorticoid regulated kinase 1 [Source:NCBI gene;Acc:395133]
29. AHSA2 1504 0.912 - - - - - - - - 0.912 - AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
30. VTI1A ENSGALG00000008880 279 0.909 - - - - - - - - 0.909 - vesicle transport through interaction with t-SNAREs 1A [Source:NCBI gene;Acc:770885]
31. CLDN10 ENSGALG00000019114 2 0.909 - - 0.909 - - - - - - - claudin 10 [Source:NCBI gene;Acc:418790]
32. MZB1 ENSGALG00000044427 6 0.908 - - 0.908 - - - - - - - marginal zone B and B1 cell specific protein [Source:HGNC Symbol;Acc:HGNC:30125]
33. CD101 12 0.908 - - 0.908 - - - - - - - CD101 molecule, transcript variant X4
34. PCDH12 ENSGALG00000002544 36 0.905 - - 0.905 - - - - - - - protocadherin 12 [Source:HGNC Symbol;Acc:HGNC:8657]
35. GGA.16412 GGA.16412 846 0.89 - - - - - - - - 0.890 -
36. gga-mir-21 ENSGALG00000021733 42 0.89 - - 0.890 - - - - - - - gga-mir-21 [Source:miRBase;Acc:MI0004994]
37. gga-mir-1652 ENSGALG00000025444 119 0.889 - - 0.889 - - - - - - - gga-mir-1652 [Source:miRBase;Acc:MI0007384]
38. KCTD14 ENSGALG00000017266 31 0.886 - - 0.886 - - - - - - - potassium channel tetramerization domain containing 14 [Source:NCBI gene;Acc:419029]
39. TBXA2R ENSGALG00000037888 24 0.886 - - 0.886 - - - - - - - thromboxane A2 receptor [Source:HGNC Symbol;Acc:HGNC:11608]
40. gga-mir-1466 ENSGALG00000025170 487 0.885 - - - - - - - - 0.885 - gga-mir-1466 [Source:miRBase;Acc:MI0007071]
41. CGN ENSGALG00000000920 407 0.884 - - - - - - - - 0.884 - cingulin [Source:HGNC Symbol;Acc:HGNC:17429]
42. LTC4SL ENSGALG00000011450 645 0.883 - - - - 0.883 - - - - - leukotriene C4 synthase-like, transcript variant X3
43. ENSGALG00000016136 ENSGALG00000016136 33 0.883 - - - - - - - - - 0.883
44. TTPA ENSGALG00000030031 500 0.882 - - - - - - - - 0.882 - alpha tocopherol transfer protein [Source:HGNC Symbol;Acc:HGNC:12404]
45. GPR103 GPR103 18 0.88 - - - - 0.880 - - - - -
46. VIT ENSGALG00000010583 16 0.88 - - - - 0.880 - - - - - vitrin [Source:NCBI gene;Acc:421471]
47. GLYCTK ENSGALG00000004018 5 0.88 - - - - 0.880 - - - - - glycerate kinase [Source:HGNC Symbol;Acc:HGNC:24247]
48. U4atac U4atac 23 0.88 - - - - 0.880 - - - - -
49. PET112 PET112 38 0.88 - - - - 0.880 - - - - -
50. FTO ENSGALG00000041036 11 0.88 - - - - 0.880 - - - - - FTO, alpha-ketoglutarate dependent dioxygenase [Source:NCBI gene;Acc:415718]
51. CLDN1 ENSGALG00000026862 28 0.88 - - - - 0.880 - - - - - claudin 1 [Source:NCBI gene;Acc:424910]
52. TEX33 ENSGALG00000012490 11 0.88 - - - - 0.880 - - - - - testis expressed 33, transcript variant X2
53. SLC30A10 ENSGALG00000026727 669 0.878 - - - 0.878 - - - - - - solute carrier family 30 member 10 [Source:HGNC Symbol;Acc:HGNC:25355]
54. HELB ENSGALG00000009885 8 0.878 - - 0.878 - - - - - - - DNA helicase B [Source:HGNC Symbol;Acc:HGNC:17196]
55. WNT3 ENSGALG00000001079 8 0.876 - - - - 0.876 - - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
56. DLG3 ENSGALG00000041900 3016 0.874 - - - - - - - - 0.874 - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
57. KCTD8 ENSGALG00000014225 47 0.874 - - - - - - - - - 0.874 potassium channel tetramerization domain containing 8 [Source:HGNC Symbol;Acc:HGNC:22394]
58. VPS33A ENSGALG00000004440 2030 0.871 - - - - - - - - 0.871 - VPS33A, CORVET/HOPS core subunit, transcript variant X1
59. REXO4 ENSGALG00000030609 2926 0.87 - - - - - - - - 0.870 - REX4 homolog, 3'-5' exonuclease [Source:HGNC Symbol;Acc:HGNC:12820]
60. GPSM1 ENSGALG00000001797 943 0.869 - - - - - - - - 0.869 - G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:17858]
61. DIAPH1 DIAPH1 357 0.868 - - - - - - - - 0.868 -
62. DAZL ENSGALG00000011243 34 0.867 - - - - 0.867 - - - - - deleted in azoospermia like [Source:NCBI gene;Acc:374054]
63. GSTA GSTA 3130 0.866 - - - - - - - - 0.866 -
64. CDERMO-1 CDERMO-1 279 0.865 - - - - - - - - 0.865 -
65. C1GALT1 ENSGALG00000009752 7148 0.863 - - - - - - - - 0.863 - core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 [Source:NCBI gene;Acc:420575]
66. GNG11 ENSGALG00000029899 327 0.863 - - - - - - - - 0.863 - G protein subunit gamma 11 [Source:NCBI gene;Acc:771999]
67. TULP3 ENSGALG00000013424 2064 0.86 - - - - - - - - 0.860 - tubby like protein 3 [Source:HGNC Symbol;Acc:HGNC:12425]
68. TMC3 ENSGALG00000006376 12 0.859 - - 0.859 - - - - - - - transmembrane channel like 3 [Source:NCBI gene;Acc:415470]
69. ASNS ENSGALG00000009748 11822 0.858 - - - - - - - - 0.858 - asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
70. ENSGALG00000019710 ENSGALG00000019710 212 0.857 - - - - - - - - 0.857 -
71. RPS6KA5 ENSGALG00000030580 218 0.856 - - - - - - - - 0.856 - ribosomal protein S6 kinase A5 [Source:NCBI gene;Acc:423408]
72. DYNLT3 ENSGALG00000016259 340 0.855 - - - - - - - - 0.855 - dynein light chain Tctex-type 3 [Source:NCBI gene;Acc:418580]
73. LEMD3 ENSGALG00000009873 347 0.855 - - - - - - - - 0.855 - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
74. PJA2 ENSGALG00000000264 1574 0.854 - - - - - - - - 0.854 - praja ring finger ubiquitin ligase 2, transcript variant X1
75. CARKD CARKD 2914 0.853 - - - - - - - - 0.853 -
76. DENND6A ENSGALG00000005656 831 0.853 - - - - - - - - 0.853 - DENN domain containing 6A [Source:NCBI gene;Acc:416006]
77. SLC7A6OS ENSGALG00000035575 2878 0.852 - - - - - - - - 0.852 - solute carrier family 7 member 6 opposite strand [Source:NCBI gene;Acc:415621]
78. GALT ENSGALG00000026195 2002 0.85 - - - - - - - - 0.850 - galactose-1-phosphate uridylyltransferase [Source:HGNC Symbol;Acc:HGNC:4135]
79. PLXNC1 ENSGALG00000011309 69 0.85 - - - - 0.850 - - - - - plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
80. EGLN3 ENSGALG00000010001 32 0.85 - - - - - - - 0.850 - - egl-9 family hypoxia inducible factor 3 [Source:HGNC Symbol;Acc:HGNC:14661]
81. TBX18 ENSGALG00000032789 1768 0.849 - - - - - 0.849 - - - - T-box 18 [Source:NCBI gene;Acc:395104]
82. SH3GL1 ENSGALG00000001121 159 0.849 - - - - - - - 0.849 - - SH3 domain containing GRB2 like 1, endophilin A2 [Source:NCBI gene;Acc:395202]
83. HPS6 ENSGALG00000020741 4 0.846 - - 0.846 - - - - - - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:HGNC Symbol;Acc:HGNC:18817]
84. TIMD4 ENSGALG00000003876 61 0.844 - - - - 0.844 - - - - - T-cell immunoglobulin and mucin domain containing 4 [Source:NCBI gene;Acc:416250]
85. ANKRD9 ENSGALG00000011376 525 0.844 - - - 0.844 - - - - - - ankyrin repeat domain 9 [Source:HGNC Symbol;Acc:HGNC:20096]
86. PPP1R13B ENSGALG00000011548 88 0.843 - - - - - - - - 0.843 - protein phosphatase 1 regulatory subunit 13B [Source:HGNC Symbol;Acc:HGNC:14950]
87. SPICE1 ENSGALG00000045606 680 0.843 - - - - - - - 0.843 - - spindle and centriole associated protein 1, transcript variant X11
88. LAMA5 486 0.842 - - - - - - - - 0.842 - laminin subunit alpha 5, transcript variant X3
89. PVALB1 PVALB1 267 0.839 - - - - - - - 0.839 - -
90. IPO8 ENSGALG00000012953 499 0.837 - - - - - - - - 0.837 - importin 8 [Source:HGNC Symbol;Acc:HGNC:9853]
91. ENSGALG00000014946 ENSGALG00000014946 40 0.837 - - - - - - - - 0.837 -
92. RNASEH1 ENSGALG00000016389 2694 0.837 - - - - - - - - 0.837 - ribonuclease H1 [Source:NCBI gene;Acc:395848]
93. ZNF608 ENSGALG00000005016 273 0.837 - - - - - - - - 0.837 - zinc finger protein 608 [Source:HGNC Symbol;Acc:HGNC:29238]
94. ENSGALG00000008689 ENSGALG00000008689 232 0.836 - - - - - - - - 0.836 -
95. TMEM177 ENSGALG00000011593 311 0.836 - - - - - - - - 0.836 - transmembrane protein 177 [Source:HGNC Symbol;Acc:HGNC:28143]
96. CCDC104 CCDC104 6584 0.835 - - - - - - - - 0.835 -
97. NIPAL4 ENSGALG00000039687 29 0.835 - - - - 0.835 - - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
98. EFTUD1 EFTUD1 3455 0.835 - - - - - - - - 0.835 -
99. NPNT ENSGALG00000043555 3002 0.833 - - - - - - - - 0.833 - nephronectin [Source:HGNC Symbol;Acc:HGNC:27405]
100. FAM221A ENSGALG00000010977 695 0.833 - - - - - - - - 0.833 - family with sequence similarity 221 member A [Source:HGNC Symbol;Acc:HGNC:27977]

There are 339 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA