Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UFM1

Gene Name Gene ID Reads Annotation
UFM1 ENSGALG00000017042 15794 ubiquitin fold modifier 1 [Source:NCBI gene;Acc:418894]











Genes with expression patterns similar to UFM1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UFM1 ENSGALG00000017042 15794 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin fold modifier 1 [Source:NCBI gene;Acc:418894]
2. ENSGALG00000023608 ENSGALG00000023608 1538 1.848 - - - 0.858 - - 0.990 - - -
3. ZNF385D ENSGALG00000011283 2578 1.716 - - 0.726 - - - 0.990 - - - zinc finger protein 385D [Source:HGNC Symbol;Acc:HGNC:26191]
4. HNRNPA2B1 ENSGALG00000011036 53662 1.694 - - - 0.735 - - 0.959 - - - heterogeneous nuclear ribonucleoprotein A2/B1 [Source:NCBI gene;Acc:420627]
5. BAG5 ENSGALG00000031062 4498 1.584 - - 0.750 0.834 - - - - - - BCL2 associated athanogene 5 [Source:NCBI gene;Acc:423482]
6. DBN1 ENSGALG00000033405 216 1.574 - - 0.716 0.858 - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
7. HPS5 ENSGALG00000027716 2466 1.561 - - 0.743 0.818 - - - - - - HPS5, biogenesis of lysosomal organelles complex 2 subunit 2
8. FTD FTD 3041 1.557 - - 0.770 0.787 - - - - - -
9. HINT3 ENSGALG00000044342 5674 1.551 - - 0.736 0.815 - - - - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
10. C1orf21 ENSGALG00000020922 4035 1.507 - - 0.723 0.784 - - - - - - chromosome 1 open reading frame 21 [Source:HGNC Symbol;Acc:HGNC:15494]
11. ING4 ENSGALG00000014457 5561 1.487 - - - 0.740 - - - 0.747 - - inhibitor of growth family member 4 [Source:NCBI gene;Acc:418281]
12. GLMN ENSGALG00000005959 2049 1.479 - - - 0.720 - - - 0.759 - - glomulin, FKBP associated protein [Source:HGNC Symbol;Acc:HGNC:14373]
13. C18orf8 C18orf8 1512 1.475 - - 0.707 0.768 - - - - - -
14. CNTRL ENSGALG00000001513 1773 1.461 - - 0.742 0.719 - - - - - - centriolin [Source:NCBI gene;Acc:417121]
15. COG7 ENSGALG00000006156 4072 1.454 - - 0.701 0.753 - - - - - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
16. USO1 ENSGALG00000010878 9506 1.444 - - - 0.725 - - - 0.719 - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
17. NUS1 ENSGALG00000014899 13352 0.997 - - - - - - 0.997 - - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:HGNC Symbol;Acc:HGNC:21042]
18. RNF4 ENSGALG00000015668 15780 0.997 - - - - - - 0.997 - - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
19. ENSGALG00000023447 ENSGALG00000023447 17486 0.996 - - - - - - 0.996 - - -
20. SRPR SRPR 21067 0.996 - - - - - - 0.996 - - -
21. COL4A5 ENSGALG00000008141 15874 0.996 - - - - - - 0.996 - - - collagen type IV alpha 5 chain [Source:HGNC Symbol;Acc:HGNC:2207]
22. TPX2 ENSGALG00000006267 26087 0.996 - - - - - - 0.996 - - - TPX2, microtubule nucleation factor [Source:NCBI gene;Acc:395081]
23. USMG5 ENSGALG00000034645 33263 0.996 - - - - - - 0.996 - - - up-regulated during skeletal muscle growth 5 homolog (mouse) [Source:NCBI gene;Acc:423873]
24. SESTD1 ENSGALG00000009031 13090 0.995 - - - - - - 0.995 - - - SEC14 and spectrin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18379]
25. BCKDHB ENSGALG00000040702 9373 0.995 - - - - - - 0.995 - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:NCBI gene;Acc:395375]
26. CTNNA1 ENSGALG00000002447 22379 0.995 - - - - - - 0.995 - - - catenin alpha 1 [Source:HGNC Symbol;Acc:HGNC:2509]
27. RNF11 ENSGALG00000010539 8617 0.995 - - - - - - 0.995 - - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
28. FASN ENSGALG00000040896 17372 0.995 - - - - - - 0.995 - - - fatty acid synthase [Source:NCBI gene;Acc:396061]
29. INPP5K ENSGALG00000002739 8120 0.995 - - - - - - 0.995 - - - inositol polyphosphate-5-phosphatase K [Source:NCBI gene;Acc:771549]
30. TMEM258 ENSGALG00000038292 31116 0.994 - - - - - - 0.994 - - - transmembrane protein 258 [Source:NCBI gene;Acc:422964]
31. SSB ENSGALG00000009677 25335 0.993 - - - - - - 0.993 - - - Sjogren syndrome antigen B [Source:NCBI gene;Acc:395268]
32. CKS1B ENSGALG00000028664 42261 0.993 - - - - - - 0.993 - - - CDC28 protein kinase regulatory subunit 1B [Source:NCBI gene;Acc:100134845]
33. RALGAPA1 ENSGALG00000010088 6005 0.993 - - - - - - 0.993 - - - Ral GTPase activating protein catalytic alpha subunit 1 [Source:NCBI gene;Acc:423327]
34. HEY1 ENSGALG00000035031 8795 0.993 - - - - - - 0.993 - - - hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]
35. PSMD7 ENSGALG00000000707 26350 0.992 - - - - - - 0.992 - - - proteasome 26S subunit, non-ATPase 7 [Source:HGNC Symbol;Acc:HGNC:9565]
36. MRPS21 ENSGALG00000000456 35298 0.992 - - - - - - 0.992 - - - mitochondrial ribosomal protein S21 [Source:NCBI gene;Acc:426666]
37. RWDD2B ENSGALG00000015807 3601 0.991 - - - - - - 0.991 - - - RWD domain containing 2B [Source:HGNC Symbol;Acc:HGNC:1302]
38. MAST4 ENSGALG00000014784 4153 0.991 - - - - - - 0.991 - - - microtubule associated serine/threonine kinase family member 4 [Source:HGNC Symbol;Acc:HGNC:19037]
39. RANBP3 ENSGALG00000000577 8856 0.991 - - - - - - 0.991 - - - RAN binding protein 3 [Source:HGNC Symbol;Acc:HGNC:9850]
40. UFSP2 ENSGALG00000010601 5809 0.991 - - - - - - 0.991 - - - UFM1 specific peptidase 2 [Source:NCBI gene;Acc:422542]
41. XRCC3 ENSGALG00000011533 3768 0.991 - - - - - - 0.991 - - - X-ray repair cross complementing 3 [Source:NCBI gene;Acc:423485]
42. DGCR14 DGCR14 2633 0.99 - - - - - - 0.990 - - -
43. DNAH17 1389 0.99 - - - - - - 0.990 - - - dynein axonemal heavy chain 17, transcript variant X6
44. ACAT1 ENSGALG00000017163 6239 0.99 - - - - - - 0.990 - - - acetyl-CoA acetyltransferase 1 [Source:NCBI gene;Acc:418968]
45. GCC1 ENSGALG00000033149 1915 0.99 - - - - - - 0.990 - - - GRIP and coiled-coil domain containing 1 [Source:NCBI gene;Acc:430581]
46. CEP19 ENSGALG00000006405 1645 0.99 - - - - - - 0.990 - - - centrosomal protein 19 [Source:NCBI gene;Acc:424858]
47. CFL2 ENSGALG00000010027 16952 0.989 - - - - - - 0.989 - - - cofilin 2 [Source:NCBI gene;Acc:423320]
48. AP3B2 2331 0.988 - - - - - - 0.988 - - - adaptor related protein complex 3 beta 2 subunit, transcript variant X7
49. MSH2 ENSGALG00000008962 9709 0.987 - - - - - - 0.987 - - - mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]
50. H3-IX_1 H3-IX_1 54392 0.984 - - - - - - 0.984 - - -
51. MAPRE1 ENSGALG00000006657 64346 0.978 - - - - - - 0.978 - - - microtubule associated protein RP/EB family member 1 [Source:NCBI gene;Acc:419288]
52. ERH ENSGALG00000017384 74926 0.925 - - - - - - 0.925 - - - ERH, mRNA splicing and mitosis factor [Source:NCBI gene;Acc:423262]
53. DCTN3 ENSGALG00000021365 22839 0.904 - - - - - - 0.904 - - - dynactin subunit 3 [Source:NCBI gene;Acc:427404]
54. ADCY9 ENSGALG00000007779 766 0.877 - - - 0.877 - - - - - - adenylate cyclase 9 [Source:NCBI gene;Acc:395339]
55. IDI1 ENSGALG00000006723 7761 0.875 - - - 0.875 - - - - - - isopentenyl-diphosphate delta isomerase 1, transcript variant X1
56. NPL ENSGALG00000004614 617 0.874 - - - 0.874 - - - - - - N-acetylneuraminate pyruvate lyase [Source:NCBI gene;Acc:429074]
57. WDR96 WDR96 255 0.87 - - - 0.870 - - - - - -
58. MED8 ENSGALG00000009993 3095 0.869 - - - 0.869 - - - - - - mediator complex subunit 8 [Source:NCBI gene;Acc:424565]
59. MTG1 ENSGALG00000003549 5032 0.869 - - - 0.869 - - - - - - mitochondrial ribosome associated GTPase 1 [Source:NCBI gene;Acc:791224]
60. VPS13B 2293 0.868 - - - 0.868 - - - - - - vacuolar protein sorting 13 homolog B
61. ZBTB17 ENSGALG00000035352 280 0.86 - - - 0.860 - - - - - - zinc finger and BTB domain containing 17 [Source:NCBI gene;Acc:396541]
62. MLH3 ENSGALG00000010304 231 0.86 - - - 0.860 - - - - - - mutL homolog 3 [Source:HGNC Symbol;Acc:HGNC:7128]
63. PASK ENSGALG00000006016 3096 0.859 - - - 0.859 - - - - - - PAS domain containing serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:17270]
64. COPA ENSGALG00000009153 11618 0.859 - - - 0.859 - - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
65. RPS10 ENSGALG00000002813 541909 0.858 - - - - - - 0.858 - - - ribosomal protein S10 [Source:NCBI gene;Acc:419904]
66. VWDE ENSGALG00000042443 160 0.855 - - - 0.855 - - - - - - von Willebrand factor D and EGF domains [Source:HGNC Symbol;Acc:HGNC:21897]
67. PPFIA1 ENSGALG00000035774 5258 0.855 - - - 0.855 - - - - - - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
68. AKT1 ENSGALG00000011620 4089 0.855 - - - 0.855 - - - - - - AKT serine/threonine kinase 1 [Source:NCBI gene;Acc:395928]
69. CACYBP ENSGALG00000004554 7320 0.855 - - - 0.855 - - - - - - calcyclin binding protein [Source:HGNC Symbol;Acc:HGNC:30423]
70. ENSGALG00000027412 ENSGALG00000027412 202 0.854 - - - 0.854 - - - - - -
71. SNORA31 SNORA31 183 0.853 - - - 0.853 - - - - - -
72. IFT43 ENSGALG00000020415 1218 0.849 - - - 0.849 - - - - - - intraflagellar transport 43 [Source:HGNC Symbol;Acc:HGNC:29669]
73. KIF6 ENSGALG00000010057 84 0.849 - - - 0.849 - - - - - - kinesin family member 6 [Source:HGNC Symbol;Acc:HGNC:21202]
74. LRRCC1 ENSGALG00000039499 480 0.847 - - - 0.847 - - - - - - leucine rich repeat and coiled-coil centrosomal protein 1 [Source:HGNC Symbol;Acc:HGNC:29373]
75. KIAA1432 KIAA1432 1792 0.845 - - - 0.845 - - - - - -
76. FRRS1 ENSGALG00000005418 332 0.845 - - - 0.845 - - - - - - ferric chelate reductase 1 [Source:HGNC Symbol;Acc:HGNC:27622]
77. TRIM62 ENSGALG00000028437 5124 0.845 - - - 0.845 - - - - - - tripartite motif containing 62 [Source:HGNC Symbol;Acc:HGNC:25574]
78. CA3 CA3 200 0.844 - - - 0.844 - - - - - -
79. TBK1 ENSGALG00000009840 1650 0.843 - - - 0.843 - - - - - - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
80. GFPT2 ENSGALG00000039705 562 0.843 - - - 0.843 - - - - - - glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]
81. RNPC3 ENSGALG00000005162 269 0.84 - - - 0.840 - - - - - - RNA binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:HGNC:18666]
82. GUF1 ENSGALG00000014217 211 0.839 - - - 0.839 - - - - - - GUF1 homolog, GTPase [Source:HGNC Symbol;Acc:HGNC:25799]
83. MCCC2L ENSGALG00000011255 889 0.839 - - - 0.839 - - - - - - methylcrotonoyl-Coenzyme A carboxylase 2-like [Source:NCBI gene;Acc:429115]
84. TMOD1 ENSGALG00000002125 933 0.838 - - - 0.838 - - - - - - tropomodulin 1 [Source:NCBI gene;Acc:395883]
85. PM20D1 ENSGALG00000000724 2108 0.837 - - - 0.837 - - - - - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
86. ASRGL1 ENSGALG00000015949 403 0.837 - - - 0.837 - - - - - - asparaginase like 1 [Source:HGNC Symbol;Acc:HGNC:16448]
87. MRPS30 ENSGALG00000014874 3416 0.837 - - - 0.837 - - - - - - mitochondrial ribosomal protein S30 [Source:NCBI gene;Acc:395781]
88. RNF8 ENSGALG00000023256 5495 0.837 - - - 0.837 - - - - - - ring finger protein 8 [Source:HGNC Symbol;Acc:HGNC:10071]
89. ATG4B ENSGALG00000006298 2288 0.836 - - - 0.836 - - - - - - autophagy related 4B cysteine peptidase [Source:NCBI gene;Acc:404750]
90. PSMD14 ENSGALG00000011128 13335 0.835 - - - 0.835 - - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
91. ISCU ENSGALG00000004869 6852 0.835 - - - 0.835 - - - - - - iron-sulfur cluster assembly enzyme [Source:HGNC Symbol;Acc:HGNC:29882]
92. KIAA1462 1612 0.834 - - - 0.834 - - - - - - KIAA1462, transcript variant X4
93. XPC ENSGALG00000006357 2484 0.833 - - - 0.833 - - - - - - XPC complex subunit, DNA damage recognition and repair factor [Source:HGNC Symbol;Acc:HGNC:12816]
94. PRDM4 ENSGALG00000012619 876 0.832 - - - 0.832 - - - - - - PR/SET domain 4 [Source:HGNC Symbol;Acc:HGNC:9348]
95. PDE4B ENSGALG00000011094 1871 0.831 - - - 0.831 - - - - - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
96. GTF3C4 ENSGALG00000031016 1221 0.83 - - - 0.830 - - - - - - general transcription factor IIIC subunit 4 [Source:HGNC Symbol;Acc:HGNC:4667]
97. SPSB1 ENSGALG00000002506 2205 0.83 - - - 0.830 - - - - - - splA/ryanodine receptor domain and SOCS box containing 1 [Source:HGNC Symbol;Acc:HGNC:30628]
98. ITGA9 ENSGALG00000029378 415 0.829 - - - 0.829 - - - - - - integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
99. DPP8 ENSGALG00000007437 1763 0.829 - - - 0.829 - - - - - - dipeptidyl peptidase 8 [Source:HGNC Symbol;Acc:HGNC:16490]
100. CREB1 ENSGALG00000008494 2219 0.828 - - - 0.828 - - - - - - cAMP responsive element binding protein 1 [Source:NCBI gene;Acc:395099]

There are 415 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA