Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UFD1L

Gene Name Gene ID Reads Annotation
UFD1L 12964 ubiquitin fusion degradation 1 like (yeast)











Genes with expression patterns similar to UFD1L

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UFD1L 12964 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin fusion degradation 1 like (yeast)
2. ARPC1A ENSGALG00000004693 11583 2.411 - - - - 0.711 - 0.855 - - 0.845 actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
3. CPSF2 ENSGALG00000010783 5236 2.4 - - - - - - 0.896 0.801 - 0.703 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
4. PNRC2 ENSGALG00000004122 19228 2.318 - - - - - - 0.808 0.753 - 0.757 proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
5. TOP3B ENSGALG00000030051 5953 2.305 - - - - - - 0.775 0.803 - 0.727 DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
6. RHOT1 ENSGALG00000003397 5149 1.774 - - - - - - - 0.949 - 0.825 ras homolog family member T1 [Source:NCBI gene;Acc:417410]
7. IPO9 ENSGALG00000000397 9263 1.761 - - - - - - 0.811 0.950 - - importin 9 [Source:HGNC Symbol;Acc:HGNC:19425]
8. RNF10 ENSGALG00000036417 8027 1.746 - - - - - - 0.822 0.924 - - ring finger protein 10 [Source:HGNC Symbol;Acc:HGNC:10055]
9. SQLE ENSGALG00000036915 4172 1.701 - - - - - - 0.796 - - 0.905 squalene epoxidase [Source:NCBI gene;Acc:420335]
10. MB21D1 2460 1.697 - - - - - - - 0.955 - 0.742 Mab-21 domain containing 1
11. SUV39H2 ENSGALG00000013920 4360 1.684 - - - - - - 0.858 - - 0.826 suppressor of variegation 3-9 homolog 2 [Source:NCBI gene;Acc:426314]
12. COPS2 ENSGALG00000000404 8980 1.676 - - - - - - 0.860 - - 0.816 COP9 signalosome subunit 2 [Source:NCBI gene;Acc:430917]
13. C1orf198 ENSGALG00000026600 5651 1.675 - - - - - - 0.836 - - 0.839 chromosome 1 open reading frame 198 [Source:HGNC Symbol;Acc:HGNC:25900]
14. OMA1 ENSGALG00000010861 3328 1.665 - - - - - - 0.716 0.949 - - OMA1 zinc metallopeptidase [Source:HGNC Symbol;Acc:HGNC:29661]
15. VAPB ENSGALG00000007549 15511 1.663 - - - - - - - 0.900 - 0.763 VAMP associated protein B and C [Source:NCBI gene;Acc:419317]
16. CETN1 ENSGALG00000026741 7243 1.65 - - - - - - 0.823 - - 0.827 centrin 1 [Source:NCBI gene;Acc:422668]
17. HELLS ENSGALG00000005451 7094 1.626 - - - - - - 0.744 - - 0.882 helicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]
18. NRSN1 ENSGALG00000037811 11424 1.619 - - - - - - - 0.865 - 0.754 neurensin 1 [Source:HGNC Symbol;Acc:HGNC:17881]
19. MOSPD1 ENSGALG00000006132 8503 1.611 - - - - 0.764 - 0.847 - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
20. GTPBP4 ENSGALG00000006703 16183 1.606 - - - - - - 0.815 - - 0.791 GTP binding protein 4 [Source:NCBI gene;Acc:420458]
21. MTDH ENSGALG00000034050 9525 1.603 - - - - - - 0.798 - - 0.805 metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
22. NDUFAF1 ENSGALG00000008587 14779 1.603 - - - - - - 0.813 - - 0.790 NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
23. ZFR ENSGALG00000003235 8466 1.6 - - - - - - 0.898 - - 0.702 zinc finger RNA binding protein, transcript variant X3
24. TAX1BP1 ENSGALG00000042822 7728 1.597 - - - - - - - 0.869 - 0.728 Tax1 binding protein 1 [Source:NCBI gene;Acc:395490]
25. FLCN ENSGALG00000004816 4101 1.585 - - - - 0.777 - 0.808 - - - folliculin, transcript variant X1
26. CHMP5 ENSGALG00000013160 13347 1.573 - - - - - - 0.814 - - 0.759 charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
27. SUN1 ENSGALG00000003781 3442 1.569 - - - - - - 0.733 - - 0.836 Sad1 and UNC84 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18587]
28. ORC4 ENSGALG00000012448 8405 1.56 - - - - 0.714 - 0.846 - - - origin recognition complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:8490]
29. FEN1 ENSGALG00000033781 16551 1.551 - - - - - - 0.830 0.721 - - flap structure-specific endonuclease 1 [Source:NCBI gene;Acc:769677]
30. RAD21 ENSGALG00000029523 25658 1.545 - - - - - - 0.808 - - 0.737 RAD21 cohesin complex component [Source:NCBI gene;Acc:420286]
31. TRAPPC4 ENSGALG00000007707 3568 1.545 - - - - 0.750 - 0.795 - - - trafficking protein particle complex 4 [Source:NCBI gene;Acc:419788]
32. RNF219 ENSGALG00000016911 4458 1.522 - - - - - - 0.788 - - 0.734 ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
33. MPRIP ENSGALG00000004798 6700 1.522 - - - - - - 0.787 - - 0.735 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
34. SCFD1 ENSGALG00000009916 5756 1.52 - - - - 0.716 - 0.804 - - - sec1 family domain containing 1 [Source:NCBI gene;Acc:423307]
35. C26H6ORF89 C26H6ORF89 1826 1.517 - - - - 0.784 - - - - 0.733
36. DDX1 ENSGALG00000016461 15157 1.516 - - - - - - - 0.700 - 0.816 DEAD-box helicase 1 [Source:NCBI gene;Acc:395249]
37. CCDC88A ENSGALG00000043587 2208 1.504 - - - - 0.781 - - - - 0.723 coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]
38. HIPK3 ENSGALG00000011695 6842 1.498 - - - - - - 0.788 - - 0.710 homeodomain interacting protein kinase 3 [Source:NCBI gene;Acc:421597]
39. RALGAPB ENSGALG00000001420 5112 1.497 - - - - 0.708 - - - - 0.789 Ral GTPase activating protein non-catalytic beta subunit [Source:NCBI gene;Acc:419128]
40. PTX3 ENSGALG00000028284 2984 1.49 - - - - 0.740 - - - - 0.750 pentraxin 3 [Source:NCBI gene;Acc:548626]
41. CDC20 ENSGALG00000009971 11197 1.482 - - - - - - 0.780 0.702 - - cell division cycle 20 [Source:NCBI gene;Acc:424563]
42. PDS5A ENSGALG00000014286 13077 1.479 - - - - - - 0.721 - - 0.758 PDS5 cohesin associated factor A [Source:NCBI gene;Acc:422787]
43. ACO2 ENSGALG00000011950 30387 1.473 - - - - - - 0.715 - - 0.758 aconitase 2 [Source:NCBI gene;Acc:374009]
44. BRD1 ENSGALG00000029379 6047 1.464 - - - - - - 0.719 - - 0.745 bromodomain containing 1 [Source:NCBI gene;Acc:417731]
45. SPCS3 ENSGALG00000010839 19106 1.462 - - - - - - 0.714 0.748 - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
46. TMEM68 ENSGALG00000031835 1691 1.454 - - - - 0.747 - - - - 0.707 transmembrane protein 68 [Source:NCBI gene;Acc:421124]
47. MARK1 ENSGALG00000009483 10350 1.417 - - - - - - - 0.716 - 0.701 microtubule affinity regulating kinase 1 [Source:HGNC Symbol;Acc:HGNC:6896]
48. FAM192A ENSGALG00000021473 10213 0.983 - - - - - - - 0.983 - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
49. ACADSB ENSGALG00000041417 7710 0.982 - - - - - - - 0.982 - - acyl-CoA dehydrogenase short/branched chain [Source:NCBI gene;Acc:423947]
50. SNAPC5 ENSGALG00000007695 4117 0.98 - - - - - - - 0.980 - - small nuclear RNA activating complex polypeptide 5 [Source:NCBI gene;Acc:415550]
51. ERLIN1 ENSGALG00000003308 6427 0.976 - - - - - - - 0.976 - - ER lipid raft associated 1 [Source:NCBI gene;Acc:423670]
52. LMNB2 ENSGALG00000000470 4364 0.974 - - - - - - - 0.974 - - lamin B2 [Source:NCBI gene;Acc:396222]
53. KXD1 ENSGALG00000036736 3771 0.97 - - - - - - - 0.970 - - KxDL motif containing 1 [Source:HGNC Symbol;Acc:HGNC:28420]
54. KDM4B ENSGALG00000034592 6711 0.962 - - - - - - - 0.962 - - lysine demethylase 4B, transcript variant X8
55. ATP8B1 ENSGALG00000030834 521 0.961 - - - - - - - 0.961 - - ATPase phospholipid transporting 8B1 [Source:NCBI gene;Acc:426857]
56. MTRF1 ENSGALG00000016951 3983 0.959 - - - - - - - 0.959 - - mitochondrial translation release factor 1 [Source:HGNC Symbol;Acc:HGNC:7469]
57. DDHD1 ENSGALG00000012426 6068 0.959 - - - - - - - 0.959 - - DDHD domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19714]
58. ADD1 ENSGALG00000015664 6828 0.959 - - - - - - - 0.959 - - adducin 1 [Source:NCBI gene;Acc:422882]
59. EED ENSGALG00000014060 6467 0.958 - - - - - - - 0.958 - - embryonic ectoderm development [Source:NCBI gene;Acc:426381]
60. ACAP2 ENSGALG00000007040 4182 0.957 - - - - - - - 0.957 - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
61. MAK16 ENSGALG00000001663 7455 0.956 - - - - - - - 0.956 - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
62. KCTD9 ENSGALG00000000275 3455 0.956 - - - - - - - 0.956 - - potassium channel tetramerization domain containing 9 [Source:NCBI gene;Acc:419526]
63. PGS1 ENSGALG00000007181 3187 0.955 - - - - - - - 0.955 - - phosphatidylglycerophosphate synthase 1 [Source:NCBI gene;Acc:422087]
64. LIN7C ENSGALG00000012170 5043 0.954 - - - - - - - 0.954 - - lin-7 homolog C, crumbs cell polarity complex component [Source:NCBI gene;Acc:421608]
65. RIOK1 ENSGALG00000012795 4658 0.953 - - - - - - - 0.953 - - RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656]
66. PPT1 ENSGALG00000003936 2540 0.953 - - - - - - - 0.953 - - palmitoyl-protein thioesterase 1 [Source:NCBI gene;Acc:419681]
67. PTPN11 ENSGALG00000004821 2658 0.953 - - - - - - - 0.953 - - protein tyrosine phosphatase, non-receptor type 11 [Source:NCBI gene;Acc:395815]
68. VPS13B 2293 0.953 - - - - - - - 0.953 - - vacuolar protein sorting 13 homolog B
69. H2AFY_1 ENSGALG00000040141 4895 0.953 - - - - - - - 0.953 - - H2A histone family, member Y [Source:NCBI gene;Acc:395858]
70. CMC1 ENSGALG00000025811 3939 0.953 - - - - - - - 0.953 - - C-X9-C motif containing 1
71. DENND5B 4077 0.952 - - - - - - - 0.952 - - DENN domain containing 5B, transcript variant X1
72. MED10 ENSGALG00000028336 9343 0.952 - - - - - - - 0.952 - - mediator complex subunit 10 [Source:HGNC Symbol;Acc:HGNC:28760]
73. KNOP1 ENSGALG00000002042 6251 0.952 - - - - - - - 0.952 - - lysine-rich nucleolar protein 1, transcript variant X1
74. PACSIN3 ENSGALG00000008231 5423 0.951 - - - - - - - 0.951 - - protein kinase C and casein kinase substrate in neurons 3 [Source:NCBI gene;Acc:423186]
75. PRORSD1P ENSGALG00000034854 2924 0.951 - - - - - - - 0.951 - - prolyl-tRNA synthetase associated domain containing 1, pseudogene [Source:NCBI gene;Acc:421212]
76. KIAA1432 KIAA1432 1792 0.95 - - - - - - - 0.950 - -
77. RBM6 ENSGALG00000035578 1690 0.95 - - - - - - - 0.950 - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
78. FGFRL1 ENSGALG00000037525 1687 0.95 - - - - - - - 0.950 - - fibroblast growth factor receptor like 1 [Source:NCBI gene;Acc:395107]
79. ADARB1 ENSGALG00000007527 2480 0.95 - - - - - - - 0.950 - - adenosine deaminase, RNA specific B1 [Source:NCBI gene;Acc:374087]
80. C3H2ORF43 C3H2ORF43 5628 0.949 - - - - - - - 0.949 - -
81. gga-mir-1787 ENSGALG00000025542 1373 0.949 - - - - - - - 0.949 - - gga-mir-1787 [Source:miRBase;Acc:MI0007530]
82. EPS15 ENSGALG00000010543 1598 0.949 - - - - - - - 0.949 - - epidermal growth factor receptor pathway substrate 15 [Source:NCBI gene;Acc:424633]
83. VRK1 ENSGALG00000011116 4524 0.948 - - - - - - - 0.948 - - vaccinia related kinase 1 [Source:NCBI gene;Acc:423443]
84. NAA50 ENSGALG00000033889 3551 0.948 - - - - - - - 0.948 - - N(alpha)-acetyltransferase 50, NatE catalytic subunit [Source:NCBI gene;Acc:418319]
85. FAS ENSGALG00000006351 461 0.948 - - - - - - - 0.948 - - Fas cell surface death receptor [Source:NCBI gene;Acc:395274]
86. ANKRD17 ENSGALG00000011642 3192 0.947 - - - - - - - 0.947 - - ankyrin repeat domain 17 [Source:HGNC Symbol;Acc:HGNC:23575]
87. QARS ENSGALG00000029980 4207 0.947 - - - - - - - 0.947 - - glutaminyl-tRNA synthetase [Source:NCBI gene;Acc:416057]
88. RPAP1 ENSGALG00000008624 3522 0.947 - - - - - - - 0.947 - - RNA polymerase II associated protein 1 [Source:HGNC Symbol;Acc:HGNC:24567]
89. SNCAIP ENSGALG00000005330 2425 0.946 - - - - - - - 0.946 - - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
90. TECPR2 ENSGALG00000011373 1063 0.945 - - - - - - - 0.945 - - tectonin beta-propeller repeat containing 2 [Source:HGNC Symbol;Acc:HGNC:19957]
91. ENSGALG00000026930 ENSGALG00000026930 681 0.945 - - - - - - - 0.945 - -
92. FBXW8 ENSGALG00000008207 1639 0.945 - - - - - - - 0.945 - - F-box and WD repeat domain containing 8 [Source:HGNC Symbol;Acc:HGNC:13597]
93. TMEM100 ENSGALG00000026465 1785 0.945 - - - - - - - 0.945 - - transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]
94. ZMYM4 ENSGALG00000002499 435 0.944 - - - - - - - 0.944 - - zinc finger MYM-type containing 4, transcript variant X1
95. NFASC ENSGALG00000031776 4264 0.944 - - - - - - - 0.944 - - neurofascin [Source:NCBI gene;Acc:419824]
96. DOCK8 481 0.943 - - - - - - - 0.943 - - dedicator of cytokinesis 8, transcript variant X1
97. PAX-6 PAX-6 2650 0.942 - - - - - - - 0.942 - -
98. KIDINS220 ENSGALG00000016409 854 0.934 - - - - - - - - - 0.934 kinase D interacting substrate 220 [Source:HGNC Symbol;Acc:HGNC:29508]
99. APIP ENSGALG00000031286 6838 0.933 - - - - - - - 0.933 - - APAF1 interacting protein [Source:NCBI gene;Acc:428860]
100. WBP11 ENSGALG00000011745 11182 0.932 - - - - - - - 0.932 - - WW domain binding protein 11, transcript variant X1

There are 704 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA