Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBXN4

Gene Name Gene ID Reads Annotation
UBXN4 ENSGALG00000012259 2922 UBX domain protein 4 [Source:HGNC Symbol;Acc:HGNC:14860]











Genes with expression patterns similar to UBXN4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBXN4 ENSGALG00000012259 2922 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 UBX domain protein 4 [Source:HGNC Symbol;Acc:HGNC:14860]
2. PPID ENSGALG00000009451 7529 1.434 - - 0.710 - - 0.724 - - - - peptidylprolyl isomerase D [Source:HGNC Symbol;Acc:HGNC:9257]
3. ZMIZ1 ENSGALG00000004850 114 0.797 - - - - - - 0.797 - - - zinc finger MIZ-type containing 1 [Source:HGNC Symbol;Acc:HGNC:16493]
4. ZCCHC17 ENSGALG00000000618 5163 0.789 - - 0.789 - - - - - - - zinc finger CCHC-type containing 17 [Source:NCBI gene;Acc:404295]
5. HYAL1 ENSGALG00000000785 1778 0.778 - - 0.778 - - - - - - - hyaluronoglucosaminidase 1, transcript variant X3
6. STAU1 ENSGALG00000004736 3828 0.769 - - 0.769 - - - - - - - staufen double-stranded RNA binding protein 1 [Source:NCBI gene;Acc:419213]
7. PPP2R5E ENSGALG00000011840 176 0.768 - - - - - - 0.768 - - - protein phosphatase 2 regulatory subunit B'epsilon [Source:HGNC Symbol;Acc:HGNC:9313]
8. TITIN TITIN 589 0.767 - - - - - - 0.767 - - -
9. TRMT10B ENSGALG00000029118 3093 0.767 - - 0.767 - - - - - - - tRNA methyltransferase 10B [Source:HGNC Symbol;Acc:HGNC:26454]
10. CEPT1 ENSGALG00000000142 4219 0.766 - - 0.766 - - - - - - - choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
11. DNAJC21 ENSGALG00000003387 1106 0.765 - - - - - 0.765 - - - - DnaJ heat shock protein family (Hsp40) member C21 [Source:HGNC Symbol;Acc:HGNC:27030]
12. UBE2R2 ENSGALG00000001668 9234 0.759 - - 0.759 - - - - - - - ubiquitin conjugating enzyme E2 R2 [Source:NCBI gene;Acc:427021]
13. SP3 ENSGALG00000031796 8997 0.759 - - 0.759 - - - - - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
14. STXBP6 ENSGALG00000009847 224 0.757 - - 0.757 - - - - - - - syntaxin binding protein 6 [Source:NCBI gene;Acc:423299]
15. AMY2A ENSGALG00000038740 102 0.756 - - - - - - 0.756 - - - amylase, alpha 2A (pancreatic) [Source:NCBI gene;Acc:414140]
16. LXR LXR 2599 0.756 - - 0.756 - - - - - - -
17. PDIA5 ENSGALG00000011689 6913 0.754 - - 0.754 - - - - - - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
18. PCDH17 ENSGALG00000016941 1006 0.751 - - 0.751 - - - - - - - protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]
19. DBX2 ENSGALG00000009604 367 0.751 - - - - - - 0.751 - - - developing brain homeobox 2 [Source:NCBI gene;Acc:417801]
20. GSDMA ENSGALG00000013495 1650 0.75 - - 0.750 - - - - - - - gasdermin A [Source:NCBI gene;Acc:426132]
21. YBX3 ENSGALG00000031890 819 0.749 - - 0.749 - - - - - - - Y-box binding protein 3 [Source:NCBI gene;Acc:396371]
22. BBX ENSGALG00000015353 1281 0.747 - - 0.747 - - - - - - - BBX, HMG-box containing [Source:HGNC Symbol;Acc:HGNC:14422]
23. MAPRE3 ENSGALG00000031726 191 0.746 - - 0.746 - - - - - - - microtubule associated protein RP/EB family member 3 [Source:HGNC Symbol;Acc:HGNC:6892]
24. SLK ENSGALG00000008318 2220 0.744 - - 0.744 - - - - - - - STE20 like kinase [Source:HGNC Symbol;Acc:HGNC:11088]
25. TMEM242 ENSGALG00000013689 377 0.744 - - 0.744 - - - - - - - transmembrane protein 242 [Source:HGNC Symbol;Acc:HGNC:17206]
26. GCC2 ENSGALG00000016806 1085 0.744 - - 0.744 - - - - - - - GRIP and coiled-coil domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23218]
27. HSP90AA1 ENSGALG00000033212 55740 0.743 - - - - - 0.743 - - - - heat shock protein 90 alpha family class A member 1 [Source:NCBI gene;Acc:423463]
28. WBP4 ENSGALG00000016949 5858 0.741 - - 0.741 - - - - - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
29. TWSG1 ENSGALG00000008400 1869 0.74 - - 0.740 - - - - - - - twisted gastrulation BMP signaling modulator 1 [Source:NCBI gene;Acc:374024]
30. WHSC1 1712 0.739 - - 0.739 - - - - - - - Wolf-Hirschhorn syndrome candidate 1, transcript variant X14
31. PRPF38B ENSGALG00000001972 2009 0.737 - - 0.737 - - - - - - - pre-mRNA processing factor 38B
32. PCYT1B 190 0.737 - - 0.737 - - - - - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
33. GXYLT2 ENSGALG00000007804 670 0.736 - - - - - - 0.736 - - - glucoside xylosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:33383]
34. SELM SELM 6366 0.736 - - 0.736 - - - - - - -
35. PTCD3 ENSGALG00000015773 3059 0.736 - - 0.736 - - - - - - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
36. RECQL ENSGALG00000013174 1323 0.736 - - 0.736 - - - - - - - RecQ like helicase [Source:NCBI gene;Acc:378910]
37. ITM2B ENSGALG00000016996 1112 0.732 - - 0.732 - - - - - - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
38. SLC7A5 ENSGALG00000005845 261 0.732 - - - - - - 0.732 - - - solute carrier family 7 member 5 [Source:NCBI gene;Acc:415832]
39. CMTM8 ENSGALG00000011484 2826 0.732 - - 0.732 - - - - - - - CKLF like MARVEL transmembrane domain containing 8 [Source:NCBI gene;Acc:420665]
40. ARID3A ENSGALG00000026231 867 0.73 - - 0.730 - - - - - - - AT-rich interaction domain 3A [Source:HGNC Symbol;Acc:HGNC:3031]
41. NEMF ENSGALG00000012263 2250 0.728 - - 0.728 - - - - - - - nuclear export mediator factor [Source:NCBI gene;Acc:428926]
42. SMARCA2 ENSGALG00000010164 2211 0.728 - - 0.728 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:NCBI gene;Acc:396040]
43. SMC5 ENSGALG00000015118 1799 0.728 - - 0.728 - - - - - - - structural maintenance of chromosomes 5 [Source:NCBI gene;Acc:431608]
44. SLCO5A1 ENSGALG00000029842 4510 0.728 - - - - - - - 0.728 - - solute carrier organic anion transporter family member 5A1 [Source:HGNC Symbol;Acc:HGNC:19046]
45. MTDH ENSGALG00000034050 9525 0.728 0.728 - - - - - - - - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
46. ATF7IP ENSGALG00000011814 1571 0.728 - - 0.728 - - - - - - - activating transcription factor 7 interacting protein [Source:NCBI gene;Acc:417966]
47. ABCC3 ENSGALG00000007522 340 0.727 - - 0.727 - - - - - - - ATP binding cassette subfamily C member 3, transcript variant X5
48. L3MBTL3 ENSGALG00000034030 113 0.726 - - 0.726 - - - - - - - L3MBTL3, histone methyl-lysine binding protein [Source:HGNC Symbol;Acc:HGNC:23035]
49. ABCE1 ENSGALG00000009961 958 0.726 - - 0.726 - - - - - - - ATP binding cassette subfamily E member 1 [Source:NCBI gene;Acc:422462]
50. GGT7 ENSGALG00000001062 476 0.726 - - 0.726 - - - - - - - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
51. RNF114 ENSGALG00000008021 6078 0.726 - - 0.726 - - - - - - - ring finger protein 114 [Source:NCBI gene;Acc:414881]
52. CHAMP1 ENSGALG00000016813 508 0.725 - - 0.725 - - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
53. DNTTIP1 ENSGALG00000003575 4687 0.725 - - 0.725 - - - - - - - deoxynucleotidyltransferase terminal interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16160]
54. KCTD3 ENSGALG00000009678 335 0.724 - - 0.724 - - - - - - - potassium channel tetramerization domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21305]
55. NXPE3 ENSGALG00000015344 111 0.724 - - 0.724 - - - - - - - neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]
56. MED15 ENSGALG00000006430 814 0.724 - - 0.724 - - - - - - - mediator complex subunit 15 [Source:HGNC Symbol;Acc:HGNC:14248]
57. SPCS3 ENSGALG00000010839 19106 0.724 - - 0.724 - - - - - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
58. PTDSS2 ENSGALG00000004300 682 0.723 - - 0.723 - - - - - - - phosphatidylserine synthase 2 [Source:NCBI gene;Acc:422997]
59. DBN1 ENSGALG00000033405 216 0.723 - - 0.723 - - - - - - - drebrin 1 [Source:NCBI gene;Acc:396496]
60. ZNF451 ENSGALG00000016282 3380 0.722 - - 0.722 - - - - - - - zinc finger protein 451 [Source:HGNC Symbol;Acc:HGNC:21091]
61. MED12 ENSGALG00000036322 814 0.722 - - 0.722 - - - - - - - mediator complex subunit 12 [Source:HGNC Symbol;Acc:HGNC:11957]
62. PDCD6 ENSGALG00000013400 7611 0.722 - - 0.722 - - - - - - - programmed cell death 6 [Source:HGNC Symbol;Acc:HGNC:8765]
63. SZT2 ENSGALG00000028561 255 0.722 - - 0.722 - - - - - - - seizure threshold 2 homolog (mouse) [Source:NCBI gene;Acc:424566]
64. ENSGALG00000002020 ENSGALG00000002020 183 0.722 - - 0.722 - - - - - - -
65. TSPAN6 ENSGALG00000006808 20063 0.722 - - 0.722 - - - - - - - tetraspanin 6 [Source:NCBI gene;Acc:422262]
66. QSER1 ENSGALG00000012030 4490 0.722 - - 0.722 - - - - - - - glutamine and serine rich 1 [Source:NCBI gene;Acc:421599]
67. TNFAIP1 ENSGALG00000005715 3347 0.721 - - 0.721 - - - - - - - TNF alpha induced protein 1 [Source:NCBI gene;Acc:417672]
68. PSMD14 ENSGALG00000011128 13335 0.721 - - 0.721 - - - - - - - proteasome 26S subunit, non-ATPase 14 [Source:NCBI gene;Acc:424189]
69. ZNF639 ENSGALG00000005944 6387 0.721 - - 0.721 - - - - - - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
70. TCERG1 ENSGALG00000007528 6346 0.721 0.721 - - - - - - - - - transcription elongation regulator 1 [Source:HGNC Symbol;Acc:HGNC:15630]
71. WAPAL WAPAL 625 0.721 - - 0.721 - - - - - - -
72. LYPLA2 ENSGALG00000004002 3939 0.72 - - 0.720 - - - - - - - lysophospholipase II [Source:NCBI gene;Acc:419685]
73. MLLT3 ENSGALG00000015078 502 0.72 - - 0.720 - - - - - - - MLLT3, super elongation complex subunit [Source:HGNC Symbol;Acc:HGNC:7136]
74. U4 U4 69 0.72 - - 0.720 - - - - - - -
75. TUBGCP3 ENSGALG00000016836 332 0.72 - - 0.720 - - - - - - - tubulin gamma complex associated protein 3 [Source:HGNC Symbol;Acc:HGNC:18598]
76. EMP1 ENSGALG00000011803 351 0.719 - - 0.719 - - - - - - - epithelial membrane protein 1 [Source:NCBI gene;Acc:417964]
77. IFT81 ENSGALG00000003854 2534 0.718 - - 0.718 - - - - - - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
78. NDUFB1 ENSGALG00000028537 2059 0.718 - - 0.718 - - - - - - - NADH:ubiquinone oxidoreductase subunit B1 [Source:NCBI gene;Acc:423415]
79. SMOC2 ENSGALG00000011205 340 0.718 - - 0.718 - - - - - - - SPARC related modular calcium binding 2 [Source:HGNC Symbol;Acc:HGNC:20323]
80. PRUNE PRUNE 452 0.718 - - 0.718 - - - - - - -
81. RALGAPA2 240 0.718 - - 0.718 - - - - - - - Ral GTPase activating protein, alpha subunit 2 (catalytic), transcript variant X6
82. TRIM13 ENSGALG00000017011 92 0.717 - - 0.717 - - - - - - - tripartite motif containing 13 [Source:HGNC Symbol;Acc:HGNC:9976]
83. LMNB2 ENSGALG00000000470 4364 0.717 - - 0.717 - - - - - - - lamin B2 [Source:NCBI gene;Acc:396222]
84. UEVLD ENSGALG00000006342 164 0.717 - - 0.717 - - - - - - - UEV and lactate/malate dehyrogenase domains [Source:NCBI gene;Acc:100858486]
85. CLEC16A ENSGALG00000007167 66 0.717 - - 0.717 - - - - - - - C-type lectin domain containing 16A [Source:HGNC Symbol;Acc:HGNC:29013]
86. LBR 6686 0.716 - - 0.716 - - - - - - - lamin B receptor, transcript variant X4
87. F2R ENSGALG00000014983 106 0.716 - - 0.716 - - - - - - - coagulation factor II thrombin receptor [Source:HGNC Symbol;Acc:HGNC:3537]
88. OSGIN2 ENSGALG00000042840 83 0.716 - - 0.716 - - - - - - - oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]
89. SEPHS1 ENSGALG00000014575 10701 0.716 - - 0.716 - - - - - - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
90. TCTN2 ENSGALG00000023683 3596 0.715 - - 0.715 - - - - - - - tectonic family member 2 [Source:HGNC Symbol;Acc:HGNC:25774]
91. ST14 ENSGALG00000001331 1655 0.715 - - 0.715 - - - - - - - suppression of tumorigenicity 14 [Source:HGNC Symbol;Acc:HGNC:11344]
92. CHGA ENSGALG00000010820 1028 0.715 - - 0.715 - - - - - - - chromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]
93. PNN ENSGALG00000010167 6417 0.715 - - - - - 0.715 - - - - pinin, desmosome associated protein [Source:HGNC Symbol;Acc:HGNC:9162]
94. LRRC42 ENSGALG00000010743 384 0.715 - - 0.715 - - - - - - - leucine rich repeat containing 42 [Source:HGNC Symbol;Acc:HGNC:28792]
95. ITGB4 ENSGALG00000002389 44 0.714 - - 0.714 - - - - - - - integrin subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:6158]
96. PSMB2 ENSGALG00000026421 51885 0.714 - - 0.714 - - - - - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
97. TDRD6 48 0.714 - - 0.714 - - - - - - - tudor domain containing 6
98. RQCD1 RQCD1 110 0.714 - - 0.714 - - - - - - -
99. EYA2 ENSGALG00000004508 939 0.714 - - - - - - 0.714 - - - Gallus gallus EYA transcriptional coactivator and phosphatase 2 (EYA2), mRNA. [Source:RefSeq mRNA;Acc:NM_204915]
100. AKAP10 ENSGALG00000004679 103 0.714 - - 0.714 - - - - - - - A-kinase anchoring protein 10 [Source:HGNC Symbol;Acc:HGNC:368]

There are 65 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA