Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBR7

Gene Name Gene ID Reads Annotation
UBR7 ENSGALG00000010842 16488 Gallus gallus ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318461]











Genes with expression patterns similar to UBR7

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBR7 ENSGALG00000010842 16488 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Gallus gallus ubiquitin protein ligase E3 component n-recognin 7 (putative) (UBR7), mRNA. [Source:RefSeq mRNA;Acc:NM_001318461]
2. BPTF ENSGALG00000038222 7521 2.401 - - - - - - 0.831 0.748 - 0.822 bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
3. FAM96B 14435 1.694 - - - - - - 0.853 - - 0.841 family with sequence similarity 96 member B
4. CLPTM1L ENSGALG00000013187 9733 1.646 - - - - - - 0.843 - - 0.803 CLPTM1 like [Source:NCBI gene;Acc:420973]
5. CREPT CREPT 17142 1.627 - - - - - - 0.828 - - 0.799
6. AK6 ENSGALG00000020534 4791 1.584 - - - - - - 0.731 - - 0.853 adenylate kinase 6 [Source:NCBI gene;Acc:425215]
7. CEPT1 ENSGALG00000000142 4219 1.564 - - - - - - - 0.767 - 0.797 choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
8. AP3S1 ENSGALG00000002341 12388 1.55 - - - - - - 0.771 0.779 - - adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
9. RPA1 ENSGALG00000003072 8023 1.547 - - - - - - 0.800 0.747 - - replication protein A1 [Source:NCBI gene;Acc:417563]
10. TATDN1 ENSGALG00000041072 1585 1.516 - - - - - - - 0.800 - 0.716 TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
11. BFAR ENSGALG00000003111 1778 1.515 - - - - - - 0.718 0.797 - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
12. TBC1D32 ENSGALG00000014876 681 1.513 - - - - - - - 0.805 - 0.708 TBC1 domain family member 32 [Source:HGNC Symbol;Acc:HGNC:21485]
13. RGCC ENSGALG00000016954 1282 1.51 - - - - - - 0.703 0.807 - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
14. RBBP6 ENSGALG00000006043 9708 1.509 - - - - - - 0.737 - - 0.772 RB binding protein 6, ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:9889]
15. PSMG3 ENSGALG00000004203 11240 1.505 - - - - - - 0.731 - - 0.774 proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
16. RILPL2 ENSGALG00000003321 5632 1.502 - - - - - - 0.763 - - 0.739 Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
17. PMPCB ENSGALG00000008280 6357 1.498 - - - - - - - 0.782 - 0.716 peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
18. HADH ENSGALG00000016124 18216 1.487 - - - - - - 0.772 0.715 - - hydroxyacyl-CoA dehydrogenase [Source:NCBI gene;Acc:420290]
19. MYST2 MYST2 8078 1.466 - - - - - - 0.758 - - 0.708
20. ACTL6A ENSGALG00000009061 13013 1.465 - - - - - - - 0.761 - 0.704 actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
21. FBXO30 ENSGALG00000041684 3033 1.458 - - - - - - - 0.729 - 0.729 F-box protein 30 [Source:HGNC Symbol;Acc:HGNC:15600]
22. GABPA ENSGALG00000015763 11567 0.95 - - - - - - 0.950 - - - GA binding protein transcription factor subunit alpha [Source:NCBI gene;Acc:418478]
23. PEBP1 ENSGALG00000007403 77502 0.931 - - - - - - 0.931 - - - phosphatidylethanolamine binding protein 1 [Source:NCBI gene;Acc:416990]
24. TALDO1 ENSGALG00000037195 30673 0.926 - - - - - - 0.926 - - - transaldolase 1 [Source:NCBI gene;Acc:423019]
25. STK4 ENSGALG00000004098 11366 0.926 - - - - - - 0.926 - - - serine/threonine kinase 4 [Source:NCBI gene;Acc:419187]
26. PSMA6 ENSGALG00000010060 26517 0.925 - - - - - - 0.925 - - - proteasome subunit alpha 6 [Source:NCBI gene;Acc:423326]
27. ID2 ENSGALG00000035016 22120 0.921 - - - - - - 0.921 - - - inhibitor of DNA binding 2, HLH protein [Source:NCBI gene;Acc:395852]
28. TP53BP2 ENSGALG00000042816 12368 0.919 - - - - - - 0.919 - - - tumor protein p53 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:12000]
29. PRMT3 ENSGALG00000003958 14160 0.918 - - - - - - 0.918 - - - protein arginine methyltransferase 3 [Source:NCBI gene;Acc:422975]
30. PSMB3 ENSGALG00000001597 22588 0.917 - - - - - - 0.917 - - - proteasome subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:9540]
31. MRPL44 ENSGALG00000003067 15256 0.912 - - - - - - 0.912 - - - mitochondrial ribosomal protein L44 [Source:NCBI gene;Acc:424795]
32. MRPL19 ENSGALG00000016731 22670 0.908 - - - - - - 0.908 - - - mitochondrial ribosomal protein L19, transcript variant X1
33. SFT2D1 ENSGALG00000020005 10855 0.905 - - - - - - 0.905 - - - SFT2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21102]
34. TCP1 ENSGALG00000011637 73216 0.905 - - - - - - 0.905 - - - t-complex 1 [Source:NCBI gene;Acc:421586]
35. UBLCP1 ENSGALG00000003672 9332 0.903 - - - - - - - 0.903 - - ubiquitin like domain containing CTD phosphatase 1 [Source:NCBI gene;Acc:416237]
36. PTBP1 ENSGALG00000001962 66983 0.901 - - - - - - 0.901 - - - polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:420098]
37. STX2 ENSGALG00000002536 10438 0.898 - - - - - - 0.898 - - - syntaxin 2 [Source:NCBI gene;Acc:378895]
38. NRD1 NRD1 10827 0.894 - - - - - - 0.894 - - -
39. PSMC2 ENSGALG00000008236 25980 0.894 - - - - - - 0.894 - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
40. CNOT7 ENSGALG00000013649 23435 0.894 - - - - - - 0.894 - - - CCR4-NOT transcription complex subunit 7 [Source:NCBI gene;Acc:422733]
41. AIRC AIRC 15851 0.888 - - - - - - 0.888 - - -
42. MINOS1 ENSGALG00000004039 37740 0.879 - - - - - - 0.879 - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
43. COX7A2L ENSGALG00000037996 13646 0.878 - - - - - - 0.878 - - - cytochrome c oxidase subunit 7A2 like [Source:NCBI gene;Acc:421392]
44. HN1 HN1 34386 0.877 - - - - - - 0.877 - - -
45. MGST1 ENSGALG00000013098 17632 0.877 - - - - - - 0.877 - - - microsomal glutathione S-transferase 1 [Source:NCBI gene;Acc:418178]
46. PMM2 ENSGALG00000007326 8260 0.876 - - - - - - 0.876 - - - phosphomannomutase 2 [Source:NCBI gene;Acc:427679]
47. LAP3 ENSGALG00000006334 21076 0.871 - - - - - - 0.871 - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
48. SNN ENSGALG00000028876 1687 0.87 - - - - - - - - - 0.870 stannin [Source:NCBI gene;Acc:416429]
49. SPTBN1 ENSGALG00000029512 18579 0.869 - - - - - - 0.869 - - - spectrin beta, non-erythrocytic 1 [Source:NCBI gene;Acc:421216]
50. COPE ENSGALG00000003153 19444 0.869 - - - - - - 0.869 - - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
51. TKT ENSGALG00000005309 19801 0.868 - - - - - - 0.868 - - - transketolase [Source:HGNC Symbol;Acc:HGNC:11834]
52. PEPD ENSGALG00000004899 9785 0.867 - - - - - - 0.867 - - - peptidase D [Source:NCBI gene;Acc:415776]
53. ENSGALG00000007509 ENSGALG00000007509 18441 0.863 - - - - - - 0.863 - - -
54. PRPS1 ENSGALG00000004908 27994 0.861 - - - - - - 0.861 - - - phosphoribosyl pyrophosphate synthetase 1
55. CLTA ENSGALG00000015326 26867 0.86 - - - - - - 0.860 - - - clathrin light chain A [Source:NCBI gene;Acc:427284]
56. SOD2 ENSGALG00000011661 13178 0.86 - - - - - - 0.860 - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
57. PHF14 ENSGALG00000038041 13687 0.859 - - - - - - - - - 0.859 PHD finger protein 14 [Source:NCBI gene;Acc:420583]
58. RCC2 ENSGALG00000031684 28067 0.858 - - - - - - 0.858 - - - regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:HGNC:30297]
59. LARP1 ENSGALG00000040109 14808 0.857 - - - - - - 0.857 - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
60. WBP11 ENSGALG00000011745 11182 0.856 - - - - - - 0.856 - - - WW domain binding protein 11, transcript variant X1
61. TACC3 ENSGALG00000015709 17336 0.855 - - - - - - - 0.855 - - transforming acidic coiled-coil containing protein 3 [Source:NCBI gene;Acc:422899]
62. VMP1 ENSGALG00000005160 12859 0.854 - - - - - - 0.854 - - - vacuole membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:29559]
63. ACAA2 ENSGALG00000031142 29220 0.853 - - - - - - 0.853 - - - acetyl-CoA acyltransferase 2 [Source:NCBI gene;Acc:426847]
64. DYNC1LI1 ENSGALG00000011491 11011 0.852 - - - - - - 0.852 - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
65. POR ENSGALG00000002053 5223 0.851 - - - - - - 0.851 - - - cytochrome p450 oxidoreductase [Source:NCBI gene;Acc:417520]
66. NAA25 ENSGALG00000041821 12729 0.85 - - - - - - 0.850 - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
67. CTCF 10811 0.849 - - - - - - - - - 0.849 CCCTC-binding factor, transcript variant X2
68. MAGOH 28688 0.847 - - - - - - 0.847 - - - mago homolog, exon junction complex core component
69. SNORA72 SNORA72 27695 0.847 - - - - - - 0.847 - - -
70. SDF4 ENSGALG00000001872 6382 0.847 - - - - - - 0.847 - - - stromal cell derived factor 4 [Source:NCBI gene;Acc:419423]
71. SF3A3 ENSGALG00000001540 9664 0.846 - - - - - - 0.846 - - - splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
72. ACO2 ENSGALG00000011950 30387 0.844 - - - - - - 0.844 - - - aconitase 2 [Source:NCBI gene;Acc:374009]
73. HDGFL3 ENSGALG00000006036 13576 0.844 - - - - - - 0.844 - - - HDGF like 3 [Source:HGNC Symbol;Acc:HGNC:24937]
74. NDUFB10 ENSGALG00000005465 41984 0.843 - - - - - - 0.843 - - - NADH:ubiquinone oxidoreductase subunit B10 [Source:HGNC Symbol;Acc:HGNC:7696]
75. TRAM1 ENSGALG00000041112 22876 0.841 - - - - - - 0.841 - - - translocation associated membrane protein 1 [Source:NCBI gene;Acc:378918]
76. HPS4 ENSGALG00000005595 2217 0.84 - - - - - - - - - 0.840 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:HGNC Symbol;Acc:HGNC:15844]
77. KARS ENSGALG00000000907 51247 0.839 - - - - - - 0.839 - - - lysyl-tRNA synthetase [Source:NCBI gene;Acc:415885]
78. TGFB3 ENSGALG00000010346 3118 0.839 - - - - - - - - - 0.839 transforming growth factor beta 3 [Source:NCBI gene;Acc:396438]
79. ADH5 ENSGALG00000012245 38217 0.837 - - - - - - 0.837 - - - alcohol dehydrogenase 5 (class III), chi polypeptide [Source:NCBI gene;Acc:422705]
80. GCLM ENSGALG00000005782 15789 0.837 - - - - - - 0.837 - - - glutamate-cysteine ligase modifier subunit [Source:NCBI gene;Acc:424492]
81. ENTHD2 684 0.836 - - - - - - - - - 0.836 ENTH domain containing 2, transcript variant X1
82. FOXP1 127 0.836 - - - - - - - - - 0.836 forkhead box P1, transcript variant X14
83. TM9SF3 ENSGALG00000005534 15290 0.835 - - - - - - 0.835 - - - transmembrane 9 superfamily member 3
84. TET1 ENSGALG00000031604 13002 0.834 - - - - - - - - - 0.834 tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
85. STAT5 STAT5 1796 0.833 - - - - - - - - - 0.833
86. SUPV3L1 ENSGALG00000004197 4141 0.833 - - - - - - - - - 0.833 Suv3 like RNA helicase [Source:NCBI gene;Acc:423697]
87. CENPJ ENSGALG00000017148 1415 0.832 - - - - - - - - - 0.832 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
88. ARL6IP5 ENSGALG00000038904 12956 0.832 - - - - - - 0.832 - - - ADP ribosylation factor like GTPase 6 interacting protein 5 [Source:NCBI gene;Acc:426074]
89. GPR114 GPR114 46 0.83 - - - - - - - - - 0.830
90. TRMT44 ENSGALG00000015594 1490 0.829 - - - - - - - - - 0.829 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
91. RPRD2 ENSGALG00000014656 939 0.829 - - - - - - - - - 0.829 regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
92. COPS4 ENSGALG00000011130 21515 0.828 - - - - - - 0.828 - - - COP9 signalosome subunit 4 [Source:NCBI gene;Acc:422594]
93. NDUFA9 ENSGALG00000017282 14358 0.828 - - - - - - 0.828 - - - NADH:ubiquinone oxidoreductase subunit A9 [Source:NCBI gene;Acc:419039]
94. FTSJ3 ENSGALG00000032993 8929 0.827 - - - - - - - - - 0.827 FtsJ RNA methyltransferase homolog 3 [Source:NCBI gene;Acc:419943]
95. PCMTD2 ENSGALG00000005901 1833 0.827 - - - - - - - - - 0.827 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
96. SIRT1 ENSGALG00000002761 9028 0.826 - - - - - - 0.826 - - - sirtuin 1 [Source:NCBI gene;Acc:423646]
97. STX6 3297 0.825 - - - - - - - - - 0.825 syntaxin 6
98. ENSGALG00000027621 ENSGALG00000027621 863 0.825 - - - - - - - - - 0.825
99. AGPAT6 AGPAT6 2564 0.823 - - - - - - - - - 0.823
100. TRIP4 ENSGALG00000030672 1255 0.823 - - - - - - - - - 0.823 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]

There are 436 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA