Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBR5

Gene Name Gene ID Reads Annotation
UBR5 ENSGALG00000031282 12143 ubiquitin protein ligase E3 component n-recognin 5 [Source:HGNC Symbol;Acc:HGNC:16806]











Genes with expression patterns similar to UBR5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBR5 ENSGALG00000031282 12143 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin protein ligase E3 component n-recognin 5 [Source:HGNC Symbol;Acc:HGNC:16806]
2. WTAP ENSGALG00000011660 10811 1.652 - - - - - - 0.717 0.935 - - WT1 associated protein [Source:HGNC Symbol;Acc:HGNC:16846]
3. GPS1 ENSGALG00000002827 8433 1.638 - - - - - - 0.839 0.799 - - G protein pathway suppressor 1 [Source:NCBI gene;Acc:417382]
4. PPP1R2 ENSGALG00000029789 11594 1.625 - - - - - - 0.706 0.919 - - protein phosphatase 1 regulatory inhibitor subunit 2 [Source:NCBI gene;Acc:424894]
5. DCAF7 ENSGALG00000000510 8681 1.614 - - - - - - 0.777 0.837 - - DDB1 and CUL4 associated factor 7 [Source:NCBI gene;Acc:771554]
6. GALNT1 ENSGALG00000013135 13583 1.612 - - - - - - 0.783 0.829 - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
7. C3H6ORF120 C3H6ORF120 2712 1.604 - - - - - - 0.758 0.846 - -
8. MED23 ENSGALG00000040607 5105 1.583 - - - - 0.732 - 0.851 - - - mediator complex subunit 23 [Source:HGNC Symbol;Acc:HGNC:2372]
9. DYRK2 ENSGALG00000009901 3141 1.58 - - - - - - 0.717 0.863 - - dual specificity tyrosine phosphorylation regulated kinase 2 [Source:NCBI gene;Acc:427864]
10. PDZD11 ENSGALG00000004198 11484 1.579 - - - - - - 0.740 0.839 - - PDZ domain containing 11 [Source:NCBI gene;Acc:422153]
11. ST5 6869 1.578 - - - - - - 0.736 0.842 - - suppression of tumorigenicity 5, transcript variant X1
12. CIAPIN1 ENSGALG00000029268 23036 1.547 - - - - - - 0.719 0.828 - - cytokine induced apoptosis inhibitor 1 [Source:NCBI gene;Acc:415637]
13. EGLN1 ENSGALG00000041422 11032 1.527 - - - - - - 0.798 0.729 - - egl-9 family hypoxia inducible factor 1 [Source:HGNC Symbol;Acc:HGNC:1232]
14. COPB2 ENSGALG00000005357 15208 1.457 - - - - - - 0.751 0.706 - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
15. SIKE1 ENSGALG00000002147 20836 1.422 - - - - - - 0.717 0.705 - - suppressor of IKBKE 1 [Source:NCBI gene;Acc:419887]
16. CIB1 ENSGALG00000008302 13946 0.942 - - - - - - - 0.942 - - calcium and integrin binding 1 [Source:NCBI gene;Acc:770162]
17. MED9 ENSGALG00000031214 10779 0.918 - - - - - - - 0.918 - - mediator complex subunit 9 [Source:NCBI gene;Acc:416506]
18. TFDP1 ENSGALG00000016823 17019 0.891 - - - - - - 0.891 - - - transcription factor Dp-1 [Source:HGNC Symbol;Acc:HGNC:11749]
19. RPL7L1 ENSGALG00000011974 20292 0.881 - - - - - - 0.881 - - - ribosomal protein L7 like 1 [Source:NCBI gene;Acc:422676]
20. COG7 ENSGALG00000006156 4072 0.879 - - - - - - - 0.879 - - component of oligomeric golgi complex 7 [Source:NCBI gene;Acc:416578]
21. MICU3 ENSGALG00000013661 1466 0.863 - - - - - - - 0.863 - - mitochondrial calcium uptake family member 3 [Source:HGNC Symbol;Acc:HGNC:27820]
22. TIMM17A ENSGALG00000000086 19205 0.862 - - - - - - 0.862 - - - translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:NCBI gene;Acc:421147]
23. PITX3 ENSGALG00000005613 1518 0.861 - - - - - - - 0.861 - - paired like homeodomain 3
24. PKP2 ENSGALG00000012913 2547 0.86 - - - - - - - 0.860 - - plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]
25. HN1 HN1 34386 0.86 - - - - - - - 0.860 - -
26. ARHGEF7 ENSGALG00000031009 10090 0.856 - - - - - - 0.856 - - - Rho guanine nucleotide exchange factor 7 [Source:HGNC Symbol;Acc:HGNC:15607]
27. FNBP1L ENSGALG00000005850 9219 0.856 - - - - - - 0.856 - - - formin binding protein 1 like [Source:HGNC Symbol;Acc:HGNC:20851]
28. HAPLN1 ENSGALG00000015627 14942 0.855 - - - - - - - 0.855 - - hyaluronan and proteoglycan link protein 1 [Source:NCBI gene;Acc:396475]
29. CENPH ENSGALG00000014788 10601 0.848 - - - - - - 0.848 - - - centromere protein H [Source:NCBI gene;Acc:395316]
30. MFN1 ENSGALG00000041873 4170 0.847 - - - - - - - 0.847 - - mitofusin 1 [Source:NCBI gene;Acc:424973]
31. NUPL1 NUPL1 8197 0.847 - - - - - - - 0.847 - -
32. TMEFF1 ENSGALG00000013212 4222 0.847 - - - - - - - 0.847 - - transmembrane protein with EGF-like and two follistatin-like domains 1
33. DIP2C ENSGALG00000006652 1858 0.846 - - - - - - - 0.846 - - disco interacting protein 2 homolog C [Source:HGNC Symbol;Acc:HGNC:29150]
34. WDR47 ENSGALG00000002129 2624 0.846 - - - - - - - 0.846 - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
35. ZNF639 ENSGALG00000005944 6387 0.846 - - - - - - - 0.846 - - zinc finger protein 639 [Source:NCBI gene;Acc:425280]
36. SOCS5 ENSGALG00000010016 1134 0.846 - - - - - - - 0.846 - - suppressor of cytokine signaling 5 [Source:NCBI gene;Acc:428570]
37. ENSGALG00000004643 ENSGALG00000004643 2297 0.846 - - - - - - - 0.846 - -
38. DACH1 ENSGALG00000037015 5648 0.846 - - - - - - - 0.846 - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
39. TTC39A ENSGALG00000010540 1025 0.846 - - - - - - - 0.846 - - tetratricopeptide repeat domain 39A [Source:HGNC Symbol;Acc:HGNC:18657]
40. PI4KA ENSGALG00000040756 3973 0.846 - - - - - - - 0.846 - - phosphatidylinositol 4-kinase alpha [Source:HGNC Symbol;Acc:HGNC:8983]
41. NUDCD1 ENSGALG00000040879 2965 0.846 - - - - - - - 0.846 - - NudC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24306]
42. SLC43A3 ENSGALG00000020479 1332 0.845 - - - - - - - 0.845 - - solute carrier family 43 member 3 [Source:HGNC Symbol;Acc:HGNC:17466]
43. DARS ENSGALG00000012355 2887 0.845 - - - - - - - 0.845 - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
44. SNAI1 ENSGALG00000008018 3930 0.845 - - - - - - - 0.845 - - snail family transcriptional repressor 1 [Source:NCBI gene;Acc:396047]
45. HIC2 ENSGALG00000033416 4051 0.845 - - - - - - - 0.845 - - hypermethylated in cancer 2 [Source:NCBI gene;Acc:416768]
46. C10orf76 C10orf76 2424 0.845 - - - - - - - 0.845 - -
47. ZC3H6 ENSGALG00000008269 10353 0.845 - - - - - - - 0.845 - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
48. FAM114A1 ENSGALG00000013583 736 0.845 - - - - - - - 0.845 - - family with sequence similarity 114 member A1 [Source:NCBI gene;Acc:426196]
49. OLFM1 ENSGALG00000002515 1841 0.845 - - - - - - - 0.845 - - olfactomedin 1 [Source:NCBI gene;Acc:395535]
50. ACL ACL 1813 0.845 - - - - - - - 0.845 - -
51. TOLLIP ENSGALG00000006697 917 0.845 - - - - - - - 0.845 - - toll interacting protein [Source:NCBI gene;Acc:423099]
52. ACTR10 ENSGALG00000012041 2752 0.845 - - - - - - - 0.845 - - actin-related protein 10 homolog [Source:NCBI gene;Acc:423543]
53. RGMA ENSGALG00000039173 12874 0.845 - - - - - - - 0.845 - - repulsive guidance molecule family member a [Source:NCBI gene;Acc:395214]
54. UBQLN1 ENSGALG00000012585 5158 0.845 - - - - - - - 0.845 - - ubiquilin 1 [Source:HGNC Symbol;Acc:HGNC:12508]
55. USP3 ENSGALG00000003427 1236 0.844 - - - - - - - 0.844 - - ubiquitin specific peptidase 3 [Source:HGNC Symbol;Acc:HGNC:12626]
56. LONP1 ENSGALG00000040492 7133 0.844 - - - - - - - 0.844 - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
57. HCFC2 ENSGALG00000029616 4525 0.844 - - - - - - - 0.844 - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
58. DERL3 ENSGALG00000005994 1499 0.844 - - - - - - - 0.844 - - derlin 3 [Source:NCBI gene;Acc:416934]
59. PHF12 ENSGALG00000031368 1960 0.844 - - - - - - - 0.844 - - PHD finger protein 12 [Source:HGNC Symbol;Acc:HGNC:20816]
60. LYPLA2 ENSGALG00000004002 3939 0.844 - - - - - - - 0.844 - - lysophospholipase II [Source:NCBI gene;Acc:419685]
61. CUTC ENSGALG00000037283 2530 0.844 - - - - - - - 0.844 - - cutC copper transporter [Source:NCBI gene;Acc:423829]
62. RRAGD ENSGALG00000026971 2429 0.844 - - - - - - - 0.844 - - Ras related GTP binding D [Source:HGNC Symbol;Acc:HGNC:19903]
63. TRNT1 ENSGALG00000017368 11932 0.843 - - - - - - - 0.843 - - tRNA nucleotidyl transferase 1 [Source:HGNC Symbol;Acc:HGNC:17341]
64. SDAD1 ENSGALG00000011543 5191 0.843 - - - - - - - 0.843 - - SDA1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25537]
65. SYNE2 ENSGALG00000011811 5542 0.843 - - - - - - - 0.843 - - spectrin repeat containing nuclear envelope protein 2 [Source:HGNC Symbol;Acc:HGNC:17084]
66. RP2 ENSGALG00000016728 3291 0.843 - - - - - - - 0.843 - - RP2, ARL3 GTPase activating protein [Source:NCBI gene;Acc:418675]
67. CDC123 ENSGALG00000014038 1418 0.843 - - - - - - - 0.843 - - cell division cycle 123 [Source:HGNC Symbol;Acc:HGNC:16827]
68. PYURF ENSGALG00000039869 5657 0.842 - - - - - - - 0.842 - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
69. RFWD3 2315 0.842 - - - - - - - 0.842 - - ring finger and WD repeat domain 3
70. DTD2 ENSGALG00000009978 4322 0.841 - - - - - - - 0.841 - - D-tyrosyl-tRNA deacylase 2 (putative) [Source:HGNC Symbol;Acc:HGNC:20277]
71. MRPL14 ENSGALG00000010285 11820 0.841 - - - - - - 0.841 - - - mitochondrial ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:14279]
72. NDUFAF2 ENSGALG00000027564 7302 0.841 - - - - - - - 0.841 - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:NCBI gene;Acc:769549]
73. NABP1 ENSGALG00000025884 4195 0.84 - - - - - - - 0.840 - - nucleic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26232]
74. KDELR2 ENSGALG00000040793 29669 0.839 - - - - - - 0.839 - - - KDEL endoplasmic reticulum protein retention receptor 2 [Source:NCBI gene;Acc:771927]
75. GMNN ENSGALG00000013626 15838 0.839 - - - - - - 0.839 - - - geminin, DNA replication inhibitor [Source:NCBI gene;Acc:421004]
76. UBE2E3 ENSGALG00000020793 9517 0.839 - - - - - - 0.839 - - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
77. RSL1D1 ENSGALG00000033690 13638 0.839 - - - - - - 0.839 - - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
78. EFNB2 ENSGALG00000029175 5664 0.838 - - - - - - - 0.838 - - ephrin B2 [Source:NCBI gene;Acc:395625]
79. NAA35 ENSGALG00000012598 6409 0.838 - - - - - - 0.838 - - - N(alpha)-acetyltransferase 35, NatC auxiliary subunit [Source:NCBI gene;Acc:427461]
80. COMMD7 ENSGALG00000006630 11491 0.838 - - - - - - - 0.838 - - COMM domain containing 7 [Source:NCBI gene;Acc:419286]
81. LOC776067 ENSGALG00000016808 9164 0.837 - - - - - - 0.837 - - - E3 SUMO-protein ligase RanBP2-like, transcript variant X50
82. TP53INP1 ENSGALG00000041353 6890 0.835 - - - - - - - 0.835 - - tumor protein p53 inducible nuclear protein 1 [Source:NCBI gene;Acc:420232]
83. PPP3CB ENSGALG00000005243 8794 0.835 - - - - - - - 0.835 - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
84. TFIP11 ENSGALG00000005623 7784 0.835 - - - - - - - 0.835 - - tuftelin interacting protein 11 [Source:NCBI gene;Acc:416909]
85. MRPL35 ENSGALG00000022950 26070 0.834 - - - - - - - 0.834 - - mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]
86. USP9X ENSGALG00000016236 9419 0.833 - - - - - - - 0.833 - - ubiquitin specific peptidase 9, X-linked, transcript variant X3
87. CDC40 ENSGALG00000015061 6118 0.831 - - - - - - 0.831 - - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
88. ABL ABL 9532 0.831 - - - - - - - 0.831 - -
89. SLC25A3 ENSGALG00000011514 62606 0.829 - - - - - - 0.829 - - - solute carrier family 25 member 3 [Source:NCBI gene;Acc:417924]
90. BIRC6 ENSGALG00000010541 7999 0.829 - - - - - - 0.829 - - - baculoviral IAP repeat containing 6 [Source:HGNC Symbol;Acc:HGNC:13516]
91. TRAPPC2L ENSGALG00000006250 21772 0.826 - - - - - - 0.826 - - - trafficking protein particle complex 2 like [Source:HGNC Symbol;Acc:HGNC:30887]
92. UPF3B ENSGALG00000008618 12350 0.825 - - - - - - 0.825 - - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
93. RGL1 ENSGALG00000004728 3004 0.824 - - - - - - - 0.824 - - ral guanine nucleotide dissociation stimulator like 1 [Source:NCBI gene;Acc:424446]
94. XPO1 ENSGALG00000029476 9526 0.823 - - - - - - 0.823 - - - exportin 1 [Source:NCBI gene;Acc:421192]
95. GLRX3 ENSGALG00000010464 22578 0.822 - - - - - - 0.822 - - - glutaredoxin 3 [Source:NCBI gene;Acc:423968]
96. PARP1 ENSGALG00000009228 39433 0.821 - - - - - - 0.821 - - - poly (ADP-ribose) polymerase 1 [Source:NCBI gene;Acc:396199]
97. DHFR ENSGALG00000026757 18478 0.821 - - - - - - - 0.821 - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
98. PPP2R5D ENSGALG00000040005 6804 0.821 - - - - - - 0.821 - - - protein phosphatase 2 regulatory subunit B'delta [Source:HGNC Symbol;Acc:HGNC:9312]
99. PRPF6 ENSGALG00000006001 8572 0.82 - - - - - - 0.820 - - - pre-mRNA processing factor 6 [Source:HGNC Symbol;Acc:HGNC:15860]
100. PPP2R5C ENSGALG00000029996 5759 0.82 - - - - - - - 0.820 - - protein phosphatase 2 regulatory subunit B'gamma [Source:NCBI gene;Acc:423460]

There are 455 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA