Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBR4

Gene Name Gene ID Reads Annotation
UBR4 ENSGALG00000030563 5225 ubiquitin protein ligase E3 component n-recognin 4 [Source:HGNC Symbol;Acc:HGNC:30313]











Genes with expression patterns similar to UBR4

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBR4 ENSGALG00000030563 5225 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin protein ligase E3 component n-recognin 4 [Source:HGNC Symbol;Acc:HGNC:30313]
2. DIEXF ENSGALG00000009887 4782 2.173 - - - - - - 0.755 0.707 - 0.711 digestive organ expansion factor homolog (zebrafish) [Source:NCBI gene;Acc:421384]
3. RCAN3 ENSGALG00000004282 7778 1.597 - - - - - - 0.779 0.818 - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
4. DNPEP ENSGALG00000011318 10623 1.548 - - - - - - 0.786 - - 0.762 aspartyl aminopeptidase [Source:NCBI gene;Acc:424200]
5. NDRG3 ENSGALG00000001492 5919 1.536 - - - - - - 0.775 0.761 - - NDRG family member 3 [Source:HGNC Symbol;Acc:HGNC:14462]
6. RNASEH1 ENSGALG00000016389 2694 1.5 - - - - - - 0.733 0.767 - - ribonuclease H1 [Source:NCBI gene;Acc:395848]
7. ATP6V0A2 ENSGALG00000003194 4824 1.494 - - - - - - - 0.750 0.744 - ATPase H+ transporting V0 subunit a2 [Source:NCBI gene;Acc:395473]
8. BIVM ENSGALG00000016861 3987 1.491 - - - - - - 0.746 0.745 - - basic, immunoglobulin-like variable motif containing [Source:NCBI gene;Acc:374099]
9. MYEF2 ENSGALG00000032546 7436 1.483 - - - - - - 0.704 0.779 - - myelin expression factor 2 [Source:NCBI gene;Acc:415432]
10. PDS5A ENSGALG00000014286 13077 0.9 - - - - - - 0.900 - - - PDS5 cohesin associated factor A [Source:NCBI gene;Acc:422787]
11. ARID2 ENSGALG00000033074 3461 0.884 - - - - - - - 0.884 - - AT-rich interaction domain 2 [Source:HGNC Symbol;Acc:HGNC:18037]
12. RPN1 ENSGALG00000005907 25315 0.88 - - - - - - - 0.880 - - ribophorin I [Source:HGNC Symbol;Acc:HGNC:10381]
13. FEN1 ENSGALG00000033781 16551 0.88 - - - - - - 0.880 - - - flap structure-specific endonuclease 1 [Source:NCBI gene;Acc:769677]
14. PDDC1 5179 0.879 - - - - - - - 0.879 - - Parkinson disease 7 domain containing 1, transcript variant X6
15. MAD2L1 ENSGALG00000011967 16125 0.875 - - - - - - 0.875 - - - mitotic arrest deficient 2 like 1 [Source:NCBI gene;Acc:422675]
16. FBXO7 ENSGALG00000012569 4124 0.873 - - - - - - - 0.873 - - F-box protein 7 [Source:NCBI gene;Acc:418063]
17. MCM4 ENSGALG00000012915 13151 0.871 - - - - - - - 0.871 - - minichromosome maintenance complex component 4
18. RNH1 ENSGALG00000006904 14542 0.871 - - - - - - - 0.871 - - ribonuclease/angiogenin inhibitor 1 [Source:NCBI gene;Acc:423111]
19. RALGAPB ENSGALG00000001420 5112 0.87 - - - - - - 0.870 - - - Ral GTPase activating protein non-catalytic beta subunit [Source:NCBI gene;Acc:419128]
20. TXLNA 6802 0.869 - - - - - - 0.869 - - - taxilin alpha, transcript variant X2
21. ENSGALG00000014375 ENSGALG00000014375 4741 0.863 - - - - - - 0.863 - - -
22. RAB12 ENSGALG00000033608 14160 0.862 - - - - - - - 0.862 - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
23. CREPT CREPT 17142 0.862 - - - - - - - 0.862 - -
24. YME1L1 ENSGALG00000007492 8652 0.858 - - - - - - 0.858 - - - YME1 like 1 ATPase [Source:NCBI gene;Acc:428418]
25. ZC3H6 ENSGALG00000008269 10353 0.855 - - - - - - 0.855 - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
26. GBAS 18453 0.853 - - - - - - 0.853 - - - glioblastoma amplified sequence
27. MARK3 ENSGALG00000011505 14846 0.851 - - - - - - 0.851 - - - microtubule affinity regulating kinase 3 [Source:HGNC Symbol;Acc:HGNC:6897]
28. NUDT1 ENSGALG00000004245 9034 0.847 - - - - - - 0.847 - - - nudix hydrolase 1 [Source:NCBI gene;Acc:416467]
29. EIF3L ENSGALG00000012296 42627 0.843 - - - - - - 0.843 - - - eukaryotic translation initiation factor 3 subunit L [Source:NCBI gene;Acc:418033]
30. XRN1 ENSGALG00000002706 4014 0.836 - - - - - - - 0.836 - - 5'-3' exoribonuclease 1 [Source:HGNC Symbol;Acc:HGNC:30654]
31. STX12 ENSGALG00000000723 9703 0.836 - - - - - - 0.836 - - - syntaxin 12 [Source:HGNC Symbol;Acc:HGNC:11430]
32. PHLDB2 ENSGALG00000015377 8560 0.834 - - - - - - - 0.834 - - pleckstrin homology like domain family B member 2 [Source:HGNC Symbol;Acc:HGNC:29573]
33. PDLIM5 ENSGALG00000012211 3064 0.833 - - - - - - - 0.833 - - PDZ and LIM domain 5 [Source:NCBI gene;Acc:422699]
34. ASNSD1 ENSGALG00000041666 3757 0.833 - - - - - - - 0.833 - - asparagine synthetase domain containing 1 [Source:NCBI gene;Acc:423983]
35. LOC112529965 ENSGALG00000010758 5395 0.832 - - - - - - - 0.832 - - NADH-cytochrome b5 reductase-like
36. CRTAP ENSGALG00000034163 6453 0.832 - - - - - - - 0.832 - - cartilage associated protein [Source:NCBI gene;Acc:395992]
37. TAF1A ENSGALG00000009441 2431 0.831 - - - - - - - 0.831 - - TATA-box binding protein associated factor, RNA polymerase I subunit A [Source:NCBI gene;Acc:421338]
38. MTMR8 ENSGALG00000007590 6022 0.831 - - - - - - - 0.831 - - myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
39. DNAJB11 ENSGALG00000006564 9353 0.831 - - - - - - 0.831 - - - DnaJ heat shock protein family (Hsp40) member B11
40. MPP1 ENSGALG00000005071 3865 0.828 - - - - - - 0.828 - - - membrane palmitoylated protein 1 [Source:NCBI gene;Acc:422197]
41. KLC1 ENSGALG00000011528 1621 0.826 - - - - - - - - 0.826 - kinesin light chain 1, transcript variant X6
42. DR1 ENSGALG00000005858 8016 0.826 - - - - - - 0.826 - - - down-regulator of transcription 1 [Source:NCBI gene;Acc:424496]
43. PSMA2 ENSGALG00000039387 23620 0.824 - - - - - - 0.824 - - - proteasome subunit alpha 2 [Source:NCBI gene;Acc:420772]
44. GNG12 ENSGALG00000026591 5817 0.824 - - - - - - - 0.824 - - G protein subunit gamma 12, transcript variant X21
45. EXOSC8 ENSGALG00000017048 2939 0.823 - - - - - - 0.823 - - - exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]
46. NSMCE2 ENSGALG00000043439 5658 0.822 - - - - - - - 0.822 - - NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase [Source:NCBI gene;Acc:420333]
47. GLT8D1 ENSGALG00000001642 4232 0.822 - - - - - - - 0.822 - - glycosyltransferase 8 domain containing 1 [Source:NCBI gene;Acc:415898]
48. TSPAN6 ENSGALG00000006808 20063 0.821 - - - - - - 0.821 - - - tetraspanin 6 [Source:NCBI gene;Acc:422262]
49. PPID ENSGALG00000009451 7529 0.821 - - - - - - - 0.821 - - peptidylprolyl isomerase D [Source:HGNC Symbol;Acc:HGNC:9257]
50. PHACTR4 ENSGALG00000042485 3523 0.82 - - - - - - 0.820 - - - phosphatase and actin regulator 4 [Source:HGNC Symbol;Acc:HGNC:25793]
51. MELK ENSGALG00000016438 9237 0.819 - - - - - - 0.819 - - - maternal embryonic leucine zipper kinase [Source:NCBI gene;Acc:428391]
52. POLR1B ENSGALG00000032273 3845 0.817 - - - - - - - 0.817 - - RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
53. LIN28B ENSGALG00000026761 13314 0.816 - - - - - - 0.816 - - - lin-28 homolog B [Source:NCBI gene;Acc:421786]
54. RB1 ENSGALG00000016997 3712 0.814 - - - - - - 0.814 - - - retinoblastoma 1 [Source:NCBI gene;Acc:386582]
55. KDM4A ENSGALG00000010074 7219 0.814 - - - - - - 0.814 - - - lysine demethylase 4A
56. IRAK1BP1 ENSGALG00000015892 2236 0.812 - - - - - - - 0.812 - - interleukin 1 receptor associated kinase 1 binding protein 1 [Source:NCBI gene;Acc:421857]
57. DSP ENSGALG00000012790 17884 0.812 - - - - - - - - 0.812 - desmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]
58. PSAP ENSGALG00000004769 14759 0.809 - - - - - - 0.809 - - - prosaposin [Source:NCBI gene;Acc:395602]
59. GTPBP4 ENSGALG00000006703 16183 0.807 - - - - - - - 0.807 - - GTP binding protein 4 [Source:NCBI gene;Acc:420458]
60. SIRT1 ENSGALG00000002761 9028 0.807 - - - - - - - 0.807 - - sirtuin 1 [Source:NCBI gene;Acc:423646]
61. COL4A1 ENSGALG00000036798 12749 0.807 - - - - - - - 0.807 - - collagen type IV alpha 1 chain [Source:NCBI gene;Acc:395530]
62. DUSP14 ENSGALG00000027641 3662 0.805 - - - - - - 0.805 - - - dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
63. GGA3 ENSGALG00000007992 3566 0.805 - - - - - - 0.805 - - - golgi associated, gamma adaptin ear containing, ARF binding protein 3 [Source:NCBI gene;Acc:422121]
64. RNF185 ENSGALG00000006960 5428 0.804 - - - - - - - 0.804 - - ring finger protein 185 [Source:NCBI gene;Acc:416965]
65. PPM1D ENSGALG00000035610 6530 0.803 - - - - - - 0.803 - - - protein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]
66. CREBL2 ENSGALG00000037030 1247 0.802 - - - - - - - 0.802 - - cAMP responsive element binding protein like 2 [Source:NCBI gene;Acc:426496]
67. CISD2 ENSGALG00000027860 12968 0.801 - - - - - - 0.801 - - - CDGSH iron sulfur domain 2 [Source:HGNC Symbol;Acc:HGNC:24212]
68. ENSGALG00000027154 ENSGALG00000027154 617 0.801 - - - - - - - - 0.801 -
69. CCDC53 CCDC53 3732 0.8 - - - - - - - 0.800 - -
70. ATXN2 ENSGALG00000004625 6306 0.8 - - - - - - 0.800 - - - ataxin 2 [Source:HGNC Symbol;Acc:HGNC:10555]
71. BCL9 ENSGALG00000037655 4620 0.8 - - - - - - 0.800 - - - B cell CLL/lymphoma 9 [Source:HGNC Symbol;Acc:HGNC:1008]
72. TOR1AIP1 ENSGALG00000029238 5843 0.799 - - - - - - - 0.799 - - torsin 1A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29456]
73. STOML2 STOML2 15566 0.798 - - - - - - - 0.798 - -
74. WDR47 ENSGALG00000002129 2624 0.795 - - - - - - 0.795 - - - WD repeat domain 47 [Source:HGNC Symbol;Acc:HGNC:29141]
75. UBIAD1 ENSGALG00000003358 4675 0.793 - - - - - - - 0.793 - - UbiA prenyltransferase domain containing 1 [Source:NCBI gene;Acc:419456]
76. MED27 ENSGALG00000003683 6808 0.793 - - - - - - - 0.793 - - mediator complex subunit 27 [Source:NCBI gene;Acc:417172]
77. MYCBP ENSGALG00000024295 13273 0.792 - - - - - - - - 0.792 - MYC binding protein
78. HNRNPLL ENSGALG00000008504 14719 0.791 - - - - - - 0.791 - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
79. CDC73 ENSGALG00000002469 4586 0.791 - - - - - - 0.791 - - - cell division cycle 73 [Source:NCBI gene;Acc:424356]
80. LONP1 ENSGALG00000040492 7133 0.791 - - - - - - 0.791 - - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
81. PTTG1 17936 0.79 - - - - - - - 0.790 - - pituitary tumor-transforming 1, transcript variant X1
82. PTPN4 3030 0.79 - - - - - - - 0.790 - - protein tyrosine phosphatase, non-receptor type 4, transcript variant X2
83. PDLIM7 ENSGALG00000026159 4700 0.79 - - - - - - - 0.790 - - PDZ and LIM domain 7 [Source:NCBI gene;Acc:416362]
84. COPE ENSGALG00000003153 19444 0.789 - - - - - - - 0.789 - - coatomer protein complex subunit epsilon [Source:NCBI gene;Acc:420117]
85. ARF4 ENSGALG00000005622 50567 0.788 - - - - - - - - 0.788 - ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]
86. SNX12 ENSGALG00000005659 9503 0.787 - - - - - - - 0.787 - - sorting nexin 12 [Source:NCBI gene;Acc:428704]
87. RELL1 ENSGALG00000014336 2950 0.787 - - - - - - - 0.787 - - RELT like 1 [Source:NCBI gene;Acc:422795]
88. PSMD6 ENSGALG00000007315 3906 0.786 - - - - - - 0.786 - - - proteasome 26S subunit, non-ATPase 6 [Source:HGNC Symbol;Acc:HGNC:9564]
89. CMSS1 ENSGALG00000015267 2954 0.786 - - - - - - 0.786 - - - cms1 ribosomal small subunit homolog (yeast) [Source:NCBI gene;Acc:418381]
90. DOK5 ENSGALG00000007786 1732 0.786 - - - - - - - 0.786 - - docking protein 5 [Source:HGNC Symbol;Acc:HGNC:16173]
91. CPQ ENSGALG00000030866 3962 0.785 - - - - - - 0.785 - - - carboxypeptidase Q [Source:NCBI gene;Acc:420238]
92. MPHOSPH8 ENSGALG00000017145 6280 0.785 - - - - - - 0.785 - - - M-phase phosphoprotein 8 [Source:NCBI gene;Acc:418957]
93. PROS1 ENSGALG00000015409 3685 0.783 - - - - - - 0.783 - - - protein S [Source:HGNC Symbol;Acc:HGNC:9456]
94. OGFOD1 6926 0.783 - - - - - - - 0.783 - - 2-oxoglutarate and iron dependent oxygenase domain containing 1
95. RTCB ENSGALG00000012611 14360 0.783 - - - - - - - - 0.783 - RNA 2',3'-cyclic phosphate and 5'-OH ligase [Source:HGNC Symbol;Acc:HGNC:26935]
96. TUBD1 ENSGALG00000005173 1364 0.782 - - - - - - 0.782 - - - tubulin delta 1 [Source:HGNC Symbol;Acc:HGNC:16811]
97. TLE3 ENSGALG00000008120 2655 0.782 - - - - - - 0.782 - - - transducin like enhancer of split 3, transcript variant X10
98. GBA2 ENSGALG00000002412 2913 0.781 - - - - - - 0.781 - - - glucosylceramidase beta 2 [Source:HGNC Symbol;Acc:HGNC:18986]
99. ZNF384 ENSGALG00000032599 2369 0.781 - - - - - - - 0.781 - - zinc finger protein 384 [Source:NCBI gene;Acc:770350]
100. UTP3 ENSGALG00000011553 8814 0.78 - - - - - - - 0.780 - - UTP3, small subunit processome component homolog (S. cerevisiae)

There are 361 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA