Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBR3

Gene Name Gene ID Reads Annotation
UBR3 113 ubiquitin protein ligase E3 component n-recognin 3 (putative), transcript variant X6











Genes with expression patterns similar to UBR3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBR3 113 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 ubiquitin protein ligase E3 component n-recognin 3 (putative), transcript variant X6
2. PLCD4 ENSGALG00000026687 24 0.865 - - - - - - 0.865 - - - phospholipase C delta 4 [Source:HGNC Symbol;Acc:HGNC:9062]
3. CAD19 CAD19 17 0.857 - - - - - - - - - 0.857
4. PIGV ENSGALG00000039883 32 0.845 - - - - - - 0.845 - - - phosphatidylinositol glycan anchor biosynthesis class V [Source:HGNC Symbol;Acc:HGNC:26031]
5. GHR_1 ENSGALG00000014855 198 0.821 - - - - - - - - - 0.821 growth hormone receptor [Source:NCBI gene;Acc:408184]
6. TMEM27 ENSGALG00000029168 36 0.807 - - - - - - 0.807 - - - transmembrane protein 27, transcript variant X3
7. TOM1L2 ENSGALG00000004902 89 0.805 - - - - 0.805 - - - - - target of myb1 like 2 membrane trafficking protein [Source:NCBI gene;Acc:416509]
8. TPO_1 ENSGALG00000016370 78 0.793 - - - - - - 0.793 - - - thyroid peroxidase [Source:HGNC Symbol;Acc:HGNC:12015]
9. NIPAL3 ENSGALG00000004268 37 0.792 - - - - 0.792 - - - - - NIPA like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:25233]
10. UBAP1L ENSGALG00000007333 39 0.789 - - - - 0.789 - - - - - ubiquitin associated protein 1 like [Source:NCBI gene;Acc:769261]
11. ARSG ENSGALG00000004193 21 0.778 - - 0.778 - - - - - - - arylsulfatase G [Source:NCBI gene;Acc:771433]
12. CLSTN3 ENSGALG00000014674 277 0.773 - - - - - - - 0.773 - - calsyntenin 3 [Source:HGNC Symbol;Acc:HGNC:18371]
13. TAP2 ENSGALG00000029381 23 0.773 - - - - - - 0.773 - - - transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) [Source:NCBI gene;Acc:427728]
14. STARD3 ENSGALG00000014607 115 0.772 - - - - - - 0.772 - - - StAR related lipid transfer domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17579]
15. DSCAM ENSGALG00000016138 16 0.772 - - - - - - 0.772 - - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
16. SCN9A ENSGALG00000027793 161 0.772 - - - - - - - 0.772 - - sodium voltage-gated channel alpha subunit 9 [Source:NCBI gene;Acc:395946]
17. MTERFD3 MTERFD3 20 0.772 - - - - - - 0.772 - - -
18. BTBD10 ENSGALG00000005369 56 0.772 - - - - - - 0.772 - - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
19. COASY ENSGALG00000028866 41 0.772 - - - - - - 0.772 - - - Coenzyme A synthase [Source:HGNC Symbol;Acc:HGNC:29932]
20. C4orf33 ENSGALG00000010108 4 0.772 - - - - - - 0.772 - - - chromosome 4 open reading frame 33 [Source:HGNC Symbol;Acc:HGNC:27025]
21. PLEKHH1 ENSGALG00000009507 18 0.772 - - - - - - 0.772 - - - pleckstrin homology, MyTH4 and FERM domain containing H1 [Source:HGNC Symbol;Acc:HGNC:17733]
22. DFNB31 DFNB31 20 0.772 - - - - - - 0.772 - - -
23. CRDS2 CRDS2 22 0.772 - - - - - - 0.772 - - -
24. PRLHRL ENSGALG00000003142 6 0.772 - - - - - - 0.772 - - - prolactin releasing hormone receptor-like [Source:NCBI gene;Acc:431251]
25. DHX58 ENSGALG00000023821 15 0.772 - - - - - - 0.772 - - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
26. GPRIN2 ENSGALG00000002048 17 0.772 - - - - - - 0.772 - - - G protein regulated inducer of neurite outgrowth 2 [Source:NCBI gene;Acc:395648]
27. ADAM33 ENSGALG00000030602 7 0.771 - - 0.771 - - - - - - - ADAM metallopeptidase domain 33 [Source:NCBI gene;Acc:422948]
28. ENSGALG00000028340 ENSGALG00000028340 31 0.771 - - - - - - 0.771 - - -
29. GRPR ENSGALG00000027960 22 0.771 - - - - - - 0.771 - - - gastrin releasing peptide receptor [Source:NCBI gene;Acc:378928]
30. B3GALT2 ENSGALG00000002477 13 0.769 - - - - - - - 0.769 - - beta-1,3-galactosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:917]
31. SLC2A11L5 ENSGALG00000005778 244 0.768 - - - - - 0.768 - - - - solute carrier family 2 member 11-like 5, transcript variant X2
32. UBR1 ENSGALG00000009249 162 0.767 - - - - - - 0.767 - - - ubiquitin protein ligase E3 component n-recognin 1 [Source:HGNC Symbol;Acc:HGNC:16808]
33. FKBP1B ENSGALG00000016500 117 0.767 - - - - - - 0.767 - - - FK506 binding protein 1B [Source:NCBI gene;Acc:395254]
34. DNM1 ENSGALG00000004852 292 0.749 - - - - - - 0.749 - - - dynamin 1 [Source:HGNC Symbol;Acc:HGNC:2972]
35. DDO ENSGALG00000015057 25 0.748 - - - - - - 0.748 - - - D-aspartate oxidase [Source:HGNC Symbol;Acc:HGNC:2727]
36. gga-mir-6561 ENSGALG00000026650 135 0.74 - - - - - - - - - 0.740 gga-mir-6561 [Source:miRBase;Acc:MI0022379]
37. ENSGALG00000006865 ENSGALG00000006865 307 0.74 - - - - - - - - - 0.740
38. SLC35B3 ENSGALG00000012778 30 0.739 - - - - - - - 0.739 - - solute carrier family 35 member B3 [Source:HGNC Symbol;Acc:HGNC:21601]
39. NDST1 ENSGALG00000004581 1981 0.725 - - - - - - 0.725 - - - N-deacetylase and N-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:7680]
40. MUL1 ENSGALG00000042761 1312 0.721 - - - - - - 0.721 - - - mitochondrial E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:25762]
41. PRKDC ENSGALG00000042469 449 0.72 - - - - 0.720 - - - - - protein kinase, DNA-activated, catalytic polypeptide [Source:NCBI gene;Acc:395376]
42. PROM2 ENSGALG00000041347 6 0.718 - - - - - - 0.718 - - - prominin 2 [Source:HGNC Symbol;Acc:HGNC:20685]
43. C1QB ENSGALG00000004771 368 0.718 - - - - - - 0.718 - - - complement C1q B chain [Source:HGNC Symbol;Acc:HGNC:1242]
44. DDB1 ENSGALG00000042333 275 0.713 - - - - - 0.713 - - - - damage specific DNA binding protein 1 [Source:NCBI gene;Acc:374050]
45. LSM11 ENSGALG00000038954 16 0.711 - - - - - - - 0.711 - - LSM11, U7 small nuclear RNA associated [Source:HGNC Symbol;Acc:HGNC:30860]
46. MORN5 ENSGALG00000044151 95 0.71 - - - - - - 0.710 - - - MORN repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:17841]
47. CHANK3 CHANK3 218 0.708 - - - - - - - 0.708 - -
48. PVRL3 PVRL3 231 0.707 - - - - - - - 0.707 - -
49. PCDH1 ENSGALG00000002553 2938 0.707 - - - - - - - - - 0.707 protocadherin 1 [Source:NCBI gene;Acc:416194]
50. NUB1 ENSGALG00000006181 269 0.706 - - - - - - - - - 0.706 negative regulator of ubiquitin like proteins 1 [Source:NCBI gene;Acc:420433]
51. VWC2 ENSGALG00000013081 492 0.704 - - - - - - 0.704 - - - von Willebrand factor C domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30200]
52. NOTUM ENSGALG00000002900 55 0.701 - - - - 0.701 - - - - - notum, palmitoleoyl-protein carboxylesterase [Source:HGNC Symbol;Acc:HGNC:27106]
53. HRH3 ENSGALG00000005170 5 0.701 - - - - 0.701 - - - - - histamine receptor H3 [Source:HGNC Symbol;Acc:HGNC:5184]
54. SNORA23 SNORA23 5 0.701 - - - - 0.701 - - - - -
55. RDH11 ENSGALG00000009538 110 0.701 - - - - - - - 0.701 - - retinol dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:17964]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA