Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBR2

Gene Name Gene ID Reads Annotation
UBR2 ENSGALG00000009906 7717 ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]











Genes with expression patterns similar to UBR2

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBR2 ENSGALG00000009906 7717 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
2. UBE2E3 ENSGALG00000020793 9517 2.416 - - 0.903 - - - 0.724 0.789 - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
3. POGLUT1 ENSGALG00000015480 12290 2.332 - - 0.740 - - - 0.725 0.867 - - protein O-glucosyltransferase 1 [Source:NCBI gene;Acc:418455]
4. CA9 ENSGALG00000021340 1431 1.881 - - 0.899 - - - - 0.982 - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
5. CEPT1 ENSGALG00000000142 4219 1.781 - - 0.852 - - - - 0.929 - - choline/ethanolamine phosphotransferase 1 [Source:NCBI gene;Acc:421152]
6. LMAN2 ENSGALG00000033232 11740 1.74 - - - - - - 0.807 0.933 - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
7. IFT57 ENSGALG00000015356 5540 1.735 - - 0.896 - - - - 0.839 - - intraflagellar transport 57 [Source:HGNC Symbol;Acc:HGNC:17367]
8. CDC23 ENSGALG00000007610 11945 1.731 - - - - - - 0.776 0.955 - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]
9. MGAT4B ENSGALG00000005924 2663 1.697 - - - - - - 0.734 0.963 - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
10. MED30 ENSGALG00000030862 7163 1.694 - - 0.778 - - - - 0.916 - - mediator complex subunit 30 [Source:NCBI gene;Acc:420284]
11. COPG2 ENSGALG00000008144 4542 1.691 - - - - - - 0.727 0.964 - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
12. SMC4 ENSGALG00000009553 15715 1.683 - - 0.898 - - - 0.785 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
13. TMEM167A ENSGALG00000027332 13862 1.669 - - 0.894 - - - 0.775 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
14. ACOT13 ENSGALG00000013632 5550 1.663 - - - - - - 0.708 0.955 - - acyl-CoA thioesterase 13 [Source:HGNC Symbol;Acc:HGNC:20999]
15. CAMSAP1 ENSGALG00000001692 2617 1.651 - - 0.890 - - - 0.761 - - - calmodulin regulated spectrin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:19946]
16. MIB1 ENSGALG00000014974 3583 1.637 - - 0.910 - - - 0.727 - - - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
17. CYP51A1 ENSGALG00000009365 6996 1.636 - - - - - - 0.701 0.935 - - cytochrome P450 family 51 subfamily A member 1 [Source:NCBI gene;Acc:420548]
18. AMBRA1 ENSGALG00000008358 2865 1.63 - - 0.904 - - - 0.726 - - - autophagy and beclin 1 regulator 1 [Source:HGNC Symbol;Acc:HGNC:25990]
19. SP3 ENSGALG00000031796 8997 1.627 - - 0.848 - - - 0.779 - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
20. SESN1 ENSGALG00000015286 2387 1.621 - - 0.913 - - - 0.708 - - - sestrin 1 [Source:HGNC Symbol;Acc:HGNC:21595]
21. GABARAPL2 ENSGALG00000003208 9195 1.618 - - 0.815 - - - 0.803 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
22. HCFC2 ENSGALG00000029616 4525 1.602 - - 0.854 - - - 0.748 - - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
23. UBE2B ENSGALG00000032664 6069 1.593 - - 0.807 - - - 0.786 - - - ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
24. BMS1 ENSGALG00000002624 8339 1.591 - - 0.816 - - - 0.775 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
25. ERCC6 ENSGALG00000006254 3452 1.589 - - 0.838 - - - 0.751 - - - ERCC excision repair 6, chromatin remodeling factor [Source:HGNC Symbol;Acc:HGNC:3438]
26. LYPLA2 ENSGALG00000004002 3939 1.589 - - 0.887 - - - 0.702 - - - lysophospholipase II [Source:NCBI gene;Acc:419685]
27. GSPT1 15580 1.582 - - 0.821 - - - 0.761 - - - G1 to S phase transition 1, transcript variant X1
28. AIMP2 ENSGALG00000003400 12655 1.58 - - - - - - 0.769 0.811 - - aminoacyl tRNA synthetase complex interacting multifunctional protein 2 [Source:HGNC Symbol;Acc:HGNC:20609]
29. LGR4 ENSGALG00000040834 5529 1.575 - - 0.813 - - - 0.762 - - - leucine rich repeat containing G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:13299]
30. UBN1 ENSGALG00000031416 2848 1.573 - - 0.851 - - - 0.722 - - - ubinuclein 1 [Source:NCBI gene;Acc:416398]
31. TMPO ENSGALG00000011504 14454 1.571 - - - - - - 0.727 0.844 - - thymopoietin [Source:NCBI gene;Acc:417923]
32. PTCD3 ENSGALG00000015773 3059 1.568 - - 0.867 - - - 0.701 - - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
33. NDUFC2 ENSGALG00000029172 26136 1.566 - - 0.857 - - - 0.709 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
34. C6ORF162 C6ORF162 4217 1.562 - - 0.808 - - - 0.754 - - -
35. FAM214A ENSGALG00000042839 3378 1.562 - - - - - - 0.769 0.793 - - family with sequence similarity 214 member A [Source:NCBI gene;Acc:415416]
36. CBLL1 ENSGALG00000038981 6725 1.56 - - 0.841 - - - 0.719 - - - Cbl proto-oncogene like 1 [Source:NCBI gene;Acc:417701]
37. CHN1 ENSGALG00000009293 6415 1.552 - - 0.774 - - - 0.778 - - - chimerin 1 [Source:NCBI gene;Acc:429021]
38. AHSA1 ENSGALG00000010463 15252 1.549 - - 0.816 - - - 0.733 - - - activator of HSP90 ATPase activity 1 [Source:HGNC Symbol;Acc:HGNC:1189]
39. ENSGALG00000009863 ENSGALG00000009863 7375 1.547 - - 0.803 - - - 0.744 - - -
40. AKAP1 ENSGALG00000005575 12051 1.547 - - 0.845 - - - 0.702 - - - A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
41. HSPA4 ENSGALG00000040882 20966 1.546 - - 0.756 - - - 0.790 - - - heat shock protein family A (Hsp70) member 4 [Source:HGNC Symbol;Acc:HGNC:5237]
42. DACH1 ENSGALG00000037015 5648 1.544 - - 0.841 - - - 0.703 - - - dachshund family transcription factor 1 [Source:NCBI gene;Acc:373935]
43. CRLS1 ENSGALG00000009214 8652 1.544 - - - - - - 0.723 0.821 - - cardiolipin synthase 1 [Source:HGNC Symbol;Acc:HGNC:16148]
44. STRAP ENSGALG00000013092 13100 1.542 - - 0.746 - - - - 0.796 - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
45. SPCS1 ENSGALG00000001655 7718 1.536 - - 0.813 - - - 0.723 - - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
46. WSB2 ENSGALG00000008151 13246 1.528 - - 0.822 - - - 0.706 - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
47. URB1 ENSGALG00000015887 5854 1.526 - - 0.804 - - - 0.722 - - - URB1 ribosome biogenesis 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:17344]
48. HCCS ENSGALG00000005571 4939 1.521 - - 0.727 - - - 0.794 - - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
49. NAA30 ENSGALG00000012098 4681 1.507 - - 0.789 - - - 0.718 - - - N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
50. CDH3 5050 1.488 - - 0.706 - - - - 0.782 - - cadherin 3
51. SPCS3 ENSGALG00000010839 19106 1.483 - - 0.755 - - - 0.728 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
52. DKC1 ENSGALG00000005054 30350 1.475 - - 0.704 - - - 0.771 - - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
53. EIF2B4 ENSGALG00000033575 3801 1.461 - - 0.726 - - - 0.735 - - - eukaryotic translation initiation factor 2B subunit delta [Source:HGNC Symbol;Acc:HGNC:3260]
54. MRPL15 ENSGALG00000041086 16820 1.459 - - - - - - 0.701 0.758 - - mitochondrial ribosomal protein L15 [Source:NCBI gene;Acc:421121]
55. SUCLG2 ENSGALG00000007652 9688 1.45 - - 0.739 - - - 0.711 - - - succinate-CoA ligase GDP-forming beta subunit [Source:NCBI gene;Acc:416087]
56. ARHGDIB ENSGALG00000011738 39492 1.437 - - - - - - 0.701 0.736 - - Rho GDP dissociation inhibitor beta [Source:NCBI gene;Acc:417941]
57. OCIAD1 ENSGALG00000014081 12065 1.435 - - - - - - 0.713 0.722 - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
58. FECH ENSGALG00000038461 3491 1.431 - - 0.708 - - - 0.723 - - - ferrochelatase [Source:NCBI gene;Acc:374020]
59. SIGMAR1 ENSGALG00000028996 12267 0.987 - - - - - - - 0.987 - - sigma non-opioid intracellular receptor 1 [Source:NCBI gene;Acc:100859748]
60. CTTN ENSGALG00000007700 709 0.983 - - - - - - - 0.983 - - cortactin [Source:NCBI gene;Acc:396455]
61. C3H6ORF154 C3H6ORF154 1078 0.983 - - - - - - - 0.983 - -
62. APC ENSGALG00000000220 1266 0.983 - - - - - - - 0.983 - - APC, WNT signaling pathway regulator, transcript variant X12
63. ACSBG2 ENSGALG00000001749 1681 0.983 - - - - - - - 0.983 - - acyl-CoA synthetase bubblegum family member 2 [Source:NCBI gene;Acc:420090]
64. AP1S2 ENSGALG00000016551 421 0.983 - - - - - - - 0.983 - - adaptor related protein complex 1 subunit sigma 2 [Source:NCBI gene;Acc:418621]
65. NPHP3 ENSGALG00000034586 1465 0.983 - - - - - - - 0.983 - - nephrocystin 3, transcript variant X1
66. TBC1D32 ENSGALG00000014876 681 0.983 - - - - - - - 0.983 - - TBC1 domain family member 32 [Source:HGNC Symbol;Acc:HGNC:21485]
67. SLC38A11 ENSGALG00000011052 386 0.983 - - - - - - - 0.983 - - solute carrier family 38 member 11 [Source:HGNC Symbol;Acc:HGNC:26836]
68. CCM2 ENSGALG00000005612 323 0.982 - - - - - - - 0.982 - - CCM2 scaffold protein [Source:NCBI gene;Acc:420410]
69. MAN2A2 ENSGALG00000033790 2717 0.982 - - - - - - - 0.982 - - mannosidase alpha class 2A member 2 [Source:HGNC Symbol;Acc:HGNC:6825]
70. SLC16A2 ENSGALG00000007748 446 0.982 - - - - - - - 0.982 - - Gallus gallus solute carrier family 16 member 2 (SLC16A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321737]
71. MSC ENSGALG00000037777 1109 0.982 - - - - - - - 0.982 - - musculin [Source:HGNC Symbol;Acc:HGNC:7321]
72. HES5 ENSGALG00000001141 6514 0.982 - - - - - - - 0.982 - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
73. MSANTD1 ENSGALG00000015628 154 0.982 - - - - - - - 0.982 - - Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
74. LONRF2 ENSGALG00000016768 193 0.982 - - - - - - - 0.982 - - LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
75. PIGG ENSGALG00000015349 314 0.982 - - - - - - - 0.982 - - phosphatidylinositol glycan anchor biosynthesis class G [Source:HGNC Symbol;Acc:HGNC:25985]
76. RGCC ENSGALG00000016954 1282 0.982 - - - - - - - 0.982 - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
77. GOLGA1 ENSGALG00000001025 334 0.982 - - - - - - - 0.982 - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
78. EIF2A ENSGALG00000010401 2201 0.981 - - - - - - - 0.981 - - eukaryotic translation initiation factor 2A [Source:NCBI gene;Acc:425042]
79. TMF1 ENSGALG00000013408 3344 0.981 - - - - - - - 0.981 - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
80. IRF2BPL ENSGALG00000041616 2835 0.981 - - - - - - - 0.981 - - interferon regulatory factor 2 binding protein like [Source:HGNC Symbol;Acc:HGNC:14282]
81. ITPR1 ENSGALG00000008294 1226 0.981 - - - - - - - 0.981 - - inositol 1,4,5-trisphosphate receptor type 1 [Source:NCBI gene;Acc:395412]
82. USP25 ENSGALG00000015693 2567 0.981 - - - - - - - 0.981 - - ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]
83. ENSGALG00000012564 ENSGALG00000012564 426 0.981 - - - - - - - 0.981 - -
84. USP54 ENSGALG00000005232 2749 0.981 - - - - - - - 0.981 - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
85. OXSR1 ENSGALG00000005979 2905 0.98 - - - - - - - 0.980 - - oxidative stress responsive 1
86. RAB35 ENSGALG00000007308 6300 0.98 - - - - - - - 0.980 - - RAB35, member RAS oncogene family [Source:NCBI gene;Acc:416983]
87. RPP38 ENSGALG00000008794 1057 0.98 - - - - - - - 0.980 - - ribonuclease P/MRP subunit p38 [Source:NCBI gene;Acc:420530]
88. KIAA1191 ENSGALG00000003370 2599 0.979 - - - - - - - 0.979 - - KIAA1191 [Source:NCBI gene;Acc:416230]
89. RAB9A ENSGALG00000016579 3262 0.979 - - - - - - - 0.979 - - RAB9A, member RAS oncogene family [Source:NCBI gene;Acc:418635]
90. UTP20 ENSGALG00000011643 3012 0.977 - - - - - - - 0.977 - - UTP20, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:17897]
91. BET1 ENSGALG00000024485 2451 0.976 - - - - - - - 0.976 - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
92. LPAR1 ENSGALG00000015729 3874 0.976 - - - - - - - 0.976 - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
93. ATG13 ENSGALG00000008347 7374 0.976 - - - - - - - 0.976 - - autophagy related 13 [Source:HGNC Symbol;Acc:HGNC:29091]
94. DFFA ENSGALG00000002820 2046 0.976 - - - - - - - 0.976 - - DNA fragmentation factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:2772]
95. BFAR ENSGALG00000003111 1778 0.975 - - - - - - - 0.975 - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
96. TATDN1 ENSGALG00000041072 1585 0.975 - - - - - - - 0.975 - - TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
97. HSBP1 ENSGALG00000043039 2365 0.974 - - - - - - - 0.974 - - heat shock factor binding protein 1 [Source:NCBI gene;Acc:415813]
98. TMEM135 2283 0.973 - - - - - - - 0.973 - - transmembrane protein 135, transcript variant X4
99. JARID2 ENSGALG00000012702 4280 0.973 - - - - - - - 0.973 - - jumonji and AT-rich interaction domain containing 2 [Source:NCBI gene;Acc:420839]
100. FBXO28 ENSGALG00000009331 2871 0.972 - - - - - - - 0.972 - - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]

There are 968 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA