Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBR1

Gene Name Gene ID Reads Annotation
UBR1 ENSGALG00000009249 162 ubiquitin protein ligase E3 component n-recognin 1 [Source:HGNC Symbol;Acc:HGNC:16808]











Genes with expression patterns similar to UBR1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBR1 ENSGALG00000009249 162 8 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin protein ligase E3 component n-recognin 1 [Source:HGNC Symbol;Acc:HGNC:16808]
2. DHX58 ENSGALG00000023821 15 0.913 - - - - - - 0.913 - - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
3. PRLHRL ENSGALG00000003142 6 0.913 - - - - - - 0.913 - - - prolactin releasing hormone receptor-like [Source:NCBI gene;Acc:431251]
4. CRDS2 CRDS2 22 0.913 - - - - - - 0.913 - - -
5. GPRIN2 ENSGALG00000002048 17 0.913 - - - - - - 0.913 - - - G protein regulated inducer of neurite outgrowth 2 [Source:NCBI gene;Acc:395648]
6. C4orf33 ENSGALG00000010108 4 0.913 - - - - - - 0.913 - - - chromosome 4 open reading frame 33 [Source:HGNC Symbol;Acc:HGNC:27025]
7. COASY ENSGALG00000028866 41 0.913 - - - - - - 0.913 - - - Coenzyme A synthase [Source:HGNC Symbol;Acc:HGNC:29932]
8. BTBD10 ENSGALG00000005369 56 0.913 - - - - - - 0.913 - - - BTB domain containing 10 [Source:NCBI gene;Acc:423029]
9. MTERFD3 MTERFD3 20 0.913 - - - - - - 0.913 - - -
10. DFNB31 DFNB31 20 0.913 - - - - - - 0.913 - - -
11. PLEKHH1 ENSGALG00000009507 18 0.913 - - - - - - 0.913 - - - pleckstrin homology, MyTH4 and FERM domain containing H1 [Source:HGNC Symbol;Acc:HGNC:17733]
12. DSCAM ENSGALG00000016138 16 0.913 - - - - - - 0.913 - - - DS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]
13. STARD3 ENSGALG00000014607 115 0.913 - - - - - - 0.913 - - - StAR related lipid transfer domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17579]
14. BLNK ENSGALG00000006973 85 0.907 - - - - - - - 0.907 - - B cell linker [Source:NCBI gene;Acc:395733]
15. PIGV ENSGALG00000039883 32 0.883 - - - - - - 0.883 - - - phosphatidylinositol glycan anchor biosynthesis class V [Source:HGNC Symbol;Acc:HGNC:26031]
16. ENSGALG00000025895 ENSGALG00000025895 69 0.866 - - - - - 0.866 - - - -
17. PROM2 ENSGALG00000041347 6 0.858 - - - - - - 0.858 - - - prominin 2 [Source:HGNC Symbol;Acc:HGNC:20685]
18. C1QB ENSGALG00000004771 368 0.858 - - - - - - 0.858 - - - complement C1q B chain [Source:HGNC Symbol;Acc:HGNC:1242]
19. TMEM27 ENSGALG00000029168 36 0.849 - - - - - - 0.849 - - - transmembrane protein 27, transcript variant X3
20. FKBP1B ENSGALG00000016500 117 0.845 - - - - - - 0.845 - - - FK506 binding protein 1B [Source:NCBI gene;Acc:395254]
21. NDST1 ENSGALG00000004581 1981 0.825 - - - - - - 0.825 - - - N-deacetylase and N-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:7680]
22. OTX2 ENSGALG00000034889 8 0.823 - - - - - - 0.823 - - - orthodenticle homeobox 2 [Source:NCBI gene;Acc:395191]
23. SLC4A10 ENSGALG00000030032 56 0.819 - - - - - - 0.819 - - - solute carrier family 4 member 10 [Source:HGNC Symbol;Acc:HGNC:13811]
24. PLCD4 ENSGALG00000026687 24 0.808 - - - - - - 0.808 - - - phospholipase C delta 4 [Source:HGNC Symbol;Acc:HGNC:9062]
25. NOL7 ENSGALG00000012695 774 0.803 - - - - - - 0.803 - - - nucleolar protein 7 [Source:HGNC Symbol;Acc:HGNC:21040]
26. KLHL11 ENSGALG00000003536 6 0.801 - - - - - - 0.801 - - - kelch like family member 11 [Source:HGNC Symbol;Acc:HGNC:19008]
27. GLIS1 ENSGALG00000010721 15 0.799 - - - - - - 0.799 - - - GLIS family zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:29525]
28. TPTE2 ENSGALG00000017031 29 0.798 - - - - - - - 0.798 - - transmembrane phosphoinositide 3-phosphatase and tensin homolog 2, transcript variant X3
29. DNAJC13 ENSGALG00000035068 180 0.798 - - - - - - - 0.798 - - DnaJ heat shock protein family (Hsp40) member C13 [Source:HGNC Symbol;Acc:HGNC:30343]
30. ZNF668 ZNF668 372 0.797 - - - - - - 0.797 - - -
31. KLHDC3 ENSGALG00000008536 1961 0.796 - - - - - - - - 0.796 - kelch domain containing 3 [Source:HGNC Symbol;Acc:HGNC:20704]
32. KIAA0319 ENSGALG00000041273 10 0.795 - - - - - - 0.795 - - - KIAA0319 [Source:HGNC Symbol;Acc:HGNC:21580]
33. MGAT4D ENSGALG00000009830 23 0.794 - - - - 0.794 - - - - - MGAT4 family member D [Source:HGNC Symbol;Acc:HGNC:43619]
34. ZNF516 ENSGALG00000013660 34 0.793 - - - - - - - 0.793 - - zinc finger protein 516 [Source:HGNC Symbol;Acc:HGNC:28990]
35. GBGT1 ENSGALG00000003340 399 0.79 - - - - - - - 0.790 - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [Source:NCBI gene;Acc:417163]
36. MAB21L2 4841 0.79 - - - - 0.790 - - - - - mab-21-like 2 (C. elegans)
37. GRPR ENSGALG00000027960 22 0.788 - - - - - - 0.788 - - - gastrin releasing peptide receptor [Source:NCBI gene;Acc:378928]
38. ENSGALG00000028340 ENSGALG00000028340 31 0.788 - - - - - - 0.788 - - -
39. SLC40A1 ENSGALG00000043618 16 0.787 - - - - - - - 0.787 - - solute carrier family 40 member 1 [Source:NCBI gene;Acc:423984]
40. REG4 ENSGALG00000002931 4 0.787 - - - - - - - 0.787 - - regenerating family member 4 [Source:NCBI gene;Acc:424379]
41. ABLIM2 ENSGALG00000043448 48 0.786 - - - - 0.786 - - - - - actin binding LIM protein family member 2 [Source:HGNC Symbol;Acc:HGNC:19195]
42. GDF10 ENSGALG00000005985 11 0.785 - - - - 0.785 - - - - - growth differentiation factor 10 [Source:HGNC Symbol;Acc:HGNC:4215]
43. RMST RMST 2 0.785 - - - - 0.785 - - - - -
44. PQLC3 ENSGALG00000016449 39 0.785 - - - - 0.785 - - - - - PQ loop repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:28503]
45. TUSC5 15 0.785 - - - - 0.785 - - - - - tumor suppressor candidate 5
46. PLSCR5 ENSGALG00000006807 9 0.785 - - - - 0.785 - - - - - phospholipid scramblase family member 5 [Source:HGNC Symbol;Acc:HGNC:19952]
47. DENND4C ENSGALG00000015083 25 0.782 - - - - - - - 0.782 - - DENN domain containing 4C [Source:HGNC Symbol;Acc:HGNC:26079]
48. WNT3A ENSGALG00000042657 22 0.782 - - - - 0.782 - - - - - Wnt family member 3A [Source:NCBI gene;Acc:395396]
49. ARNTL ENSGALG00000005378 19 0.782 - - - - - - - 0.782 - - aryl hydrocarbon receptor nuclear translocator like [Source:NCBI gene;Acc:374115]
50. GABRD ENSGALG00000001282 8 0.78 - - - - 0.780 - - - - - gamma-aminobutyric acid type A receptor delta subunit [Source:HGNC Symbol;Acc:HGNC:4084]
51. GPC6 ENSGALG00000016900 13 0.78 - - - - 0.780 - - - - - glypican 6 [Source:HGNC Symbol;Acc:HGNC:4454]
52. CCNA1 ENSGALG00000017052 23 0.777 - - - - 0.777 - - - - - cyclin A1 [Source:HGNC Symbol;Acc:HGNC:1577]
53. LIMS2 ENSGALG00000001995 41 0.776 - - - - - - 0.776 - - - LIM zinc finger domain containing 2 [Source:HGNC Symbol;Acc:HGNC:16084]
54. GPRC5B ENSGALG00000002028 28 0.775 - - - - - - - 0.775 - - G protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]
55. ENSGALG00000019672 ENSGALG00000019672 18 0.775 - - - - - - - 0.775 - -
56. EFCAB4A EFCAB4A 12 0.775 - - - - - - - 0.775 - -
57. ATMIN ENSGALG00000040475 16 0.775 - - - - - - - 0.775 - - ATM interactor [Source:HGNC Symbol;Acc:HGNC:29034]
58. RNaseP RNaseP 30 0.775 - - - - - - - 0.775 - -
59. IL1RAP ENSGALG00000007253 6 0.775 - - - - - - - 0.775 - - interleukin 1 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:5995]
60. HFM1 ENSGALG00000006091 5 0.775 - - - - - - - 0.775 - - HFM1, ATP dependent DNA helicase homolog [Source:HGNC Symbol;Acc:HGNC:20193]
61. CBL ENSGALG00000029077 6 0.775 - - - - - - - 0.775 - - Cbl proto-oncogene [Source:NCBI gene;Acc:374038]
62. GNB4 ENSGALG00000008983 26 0.775 - - - - - - - 0.775 - - G protein subunit beta 4 [Source:HGNC Symbol;Acc:HGNC:20731]
63. ESYT3 ENSGALG00000012092 13 0.775 - - - - - - 0.775 - - - extended synaptotagmin 3 [Source:HGNC Symbol;Acc:HGNC:24295]
64. NDST4 ENSGALG00000012015 43 0.775 - - - - - - - 0.775 - - N-deacetylase and N-sulfotransferase 4 [Source:HGNC Symbol;Acc:HGNC:20779]
65. TSNAXIP1 ENSGALG00000001533 9 0.775 - - - - - - - 0.775 - - translin associated factor X interacting protein 1, transcript variant X2
66. ST8SIA6 ENSGALG00000008671 8 0.775 - - - - - - - 0.775 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:NCBI gene;Acc:414335]
67. ENSGALG00000002493 ENSGALG00000002493 2 0.775 - - - - - - - 0.775 - -
68. BTBD19 ENSGALG00000028978 20 0.771 - - - - - - - 0.771 - - BTB domain containing 19 [Source:HGNC Symbol;Acc:HGNC:27145]
69. GLB1 ENSGALG00000040028 207 0.77 - - - - - - - 0.770 - - galactosidase beta 1 [Source:NCBI gene;Acc:420720]
70. TAP2 ENSGALG00000029381 23 0.77 - - - - - - 0.770 - - - transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) [Source:NCBI gene;Acc:427728]
71. ENSGALG00000016784 ENSGALG00000016784 245 0.769 - - - - - - 0.769 - - -
72. UBR3 113 0.767 - - - - - - 0.767 - - - ubiquitin protein ligase E3 component n-recognin 3 (putative), transcript variant X6
73. CGRRF1 ENSGALG00000012206 41 0.765 - - - - 0.765 - - - - - cell growth regulator with ring finger domain 1 [Source:HGNC Symbol;Acc:HGNC:15528]
74. ZNF770 ENSGALG00000009817 27 0.764 - - - - - - - 0.764 - - zinc finger protein 770 [Source:HGNC Symbol;Acc:HGNC:26061]
75. EDN2 ENSGALG00000000667 219 0.76 - - - - - - - 0.760 - - endothelin 2 [Source:NCBI gene;Acc:419559]
76. FLOT2 ENSGALG00000031216 1003 0.759 - - - - - - 0.759 - - - flotillin 2 [Source:NCBI gene;Acc:417579]
77. PREX2 ENSGALG00000042354 134 0.758 - - - - 0.758 - - - - - phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
78. ENSGALG00000008040 ENSGALG00000008040 114 0.756 - - - - - - 0.756 - - -
79. ADM ENSGALG00000046593 1837 0.755 - - - - - - - - 0.755 - adrenomedullin [Source:HGNC Symbol;Acc:HGNC:259]
80. GNPDA1 ENSGALG00000040594 13 0.753 - - - - - - - 0.753 - - glucosamine-6-phosphate deaminase 1 [Source:NCBI gene;Acc:416341]
81. ROBO1 ENSGALG00000015511 213 0.753 - - - - - - 0.753 - - - roundabout guidance receptor 1 [Source:HGNC Symbol;Acc:HGNC:10249]
82. PTCH2 ENSGALG00000010133 16 0.753 - - - - 0.753 - - - - - patched 2 [Source:HGNC Symbol;Acc:HGNC:9586]
83. SASH3 ENSGALG00000032530 126 0.753 - - - - - - - 0.753 - - SAM and SH3 domain containing 3 [Source:NCBI gene;Acc:422138]
84. TANC2 26 0.752 - - - - - - 0.752 - - - tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, transcript variant X14
85. POLR1D ENSGALG00000007470 1342 0.751 - - - - - - 0.751 - - - RNA polymerase I subunit D
86. TOPAZ1 18 0.751 - - - - 0.751 - - - - - testis and ovary specific PAZ domain containing 1, transcript variant X6
87. MBTD1 ENSGALG00000002954 254 0.75 - - - - - - - 0.750 - - mbt domain containing 1 [Source:HGNC Symbol;Acc:HGNC:19866]
88. CIDEC ENSGALG00000026945 718 0.75 - - - - - 0.750 - - - - cell death inducing DFFA like effector c [Source:NCBI gene;Acc:100859733]
89. ZFAT ENSGALG00000037698 34 0.748 - - - - 0.748 - - - - - zinc finger and AT-hook domain containing [Source:HGNC Symbol;Acc:HGNC:19899]
90. DGKB ENSGALG00000033561 170 0.748 - - - - - - - 0.748 - - diacylglycerol kinase beta [Source:HGNC Symbol;Acc:HGNC:2850]
91. MAPKAP1 ENSGALG00000000977 193 0.747 - - - - 0.747 - - - - - mitogen-activated protein kinase associated protein 1 [Source:NCBI gene;Acc:395627]
92. TMC1 ENSGALG00000015145 1180 0.746 - - - - - - - 0.746 - - transmembrane channel like 1 [Source:NCBI gene;Acc:427255]
93. ENSGALG00000007388 ENSGALG00000007388 41 0.743 - - - - 0.743 - - - - -
94. SLC45A3 ENSGALG00000000703 85 0.741 - - - - - - - 0.741 - - solute carrier family 45 member 3 [Source:HGNC Symbol;Acc:HGNC:8642]
95. EPHX2 ENSGALG00000016567 399 0.74 - - - - 0.740 - - - - - epoxide hydrolase 2 [Source:NCBI gene;Acc:421999]
96. DUSP22 ENSGALG00000027397 886 0.738 - - - - - - 0.738 - - - dual specificity phosphatase 22 [Source:HGNC Symbol;Acc:HGNC:16077]
97. SEPT8 ENSGALG00000034187 204 0.738 - - - - - - - - 0.738 - septin 8 [Source:NCBI gene;Acc:416333]
98. GUCY1A2 ENSGALG00000017173 120 0.736 - - - - - - - - - 0.736 guanylate cyclase 1 soluble subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:4684]
99. SMTN 18 0.736 - - - - - - 0.736 - - - smoothelin, transcript variant X2
100. AFF4 ENSGALG00000030147 56 0.733 - - - - - - - 0.733 - - AF4/FMR2 family member 4 [Source:HGNC Symbol;Acc:HGNC:17869]

There are 33 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA