Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBP1

Gene Name Gene ID Reads Annotation
UBP1 ENSGALG00000035630 13359 upstream binding protein 1 [Source:HGNC Symbol;Acc:HGNC:12507]











Genes with expression patterns similar to UBP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBP1 ENSGALG00000035630 13359 9 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 upstream binding protein 1 [Source:HGNC Symbol;Acc:HGNC:12507]
2. ASPM ENSGALG00000032398 12784 1.762 - - - - 0.892 - 0.870 - - - abnormal spindle microtubule assembly [Source:HGNC Symbol;Acc:HGNC:19048]
3. CAPZA1 ENSGALG00000001547 24242 1.594 - - - - - - 0.753 0.841 - - capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
4. COPS3 ENSGALG00000004834 16012 1.54 - - - - - - 0.721 0.819 - - COP9 signalosome subunit 3 [Source:NCBI gene;Acc:416504]
5. WDR1 ENSGALG00000014957 15700 0.998 - - - - - - 0.998 - - - WD repeat domain 1 [Source:NCBI gene;Acc:422842]
6. MRPS25 ENSGALG00000008506 12131 0.998 - - - - - - 0.998 - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
7. SEC13 ENSGALG00000008419 18388 0.998 - - - - - - 0.998 - - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:NCBI gene;Acc:416119]
8. HAUS6 ENSGALG00000015091 9671 0.998 - - - - - - 0.998 - - - HAUS augmin like complex subunit 6 [Source:NCBI gene;Acc:427238]
9. PSMA3 ENSGALG00000012039 26539 0.997 - - - - - - 0.997 - - - proteasome subunit alpha 3 [Source:NCBI gene;Acc:423542]
10. CDH5 ENSGALG00000032349 8526 0.997 - - - - - - 0.997 - - - cadherin 5 [Source:NCBI gene;Acc:374068]
11. CDCA3 ENSGALG00000014513 17047 0.997 - - - - - - 0.997 - - - cell division cycle associated 3 [Source:NCBI gene;Acc:770517]
12. NUP214 ENSGALG00000041111 4902 0.996 - - - - - - 0.996 - - - nucleoporin 214 [Source:HGNC Symbol;Acc:HGNC:8064]
13. MRPL51 ENSGALG00000014435 29348 0.996 - - - - - - 0.996 - - - mitochondrial ribosomal protein L51 [Source:NCBI gene;Acc:418274]
14. MED10 ENSGALG00000028336 9343 0.996 - - - - - - 0.996 - - - mediator complex subunit 10 [Source:HGNC Symbol;Acc:HGNC:28760]
15. CARHSP1 ENSGALG00000042981 6920 0.996 - - - - - - 0.996 - - - calcium regulated heat stable protein 1 [Source:HGNC Symbol;Acc:HGNC:17150]
16. GMPS ENSGALG00000010284 8765 0.996 - - - - - - 0.996 - - - guanine monophosphate synthase [Source:NCBI gene;Acc:425028]
17. TAF13 ENSGALG00000015185 11410 0.996 - - - - - - 0.996 - - - TATA-box binding protein associated factor 13 [Source:NCBI gene;Acc:418365]
18. HDHD2 ENSGALG00000034801 6373 0.996 - - - - - - 0.996 - - - haloacid dehalogenase like hydrolase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25364]
19. GLCCI1 ENSGALG00000035239 22149 0.996 - - - - - - 0.996 - - - glucocorticoid induced 1 [Source:NCBI gene;Acc:420580]
20. CENPL ENSGALG00000038411 4867 0.996 - - - - - - 0.996 - - - centromere protein L [Source:NCBI gene;Acc:426563]
21. ARPC3 ENSGALG00000003820 29128 0.995 - - - - - - 0.995 - - - actin related protein 2/3 complex subunit 3 [Source:NCBI gene;Acc:416837]
22. TNNI1 ENSGALG00000000313 4069 0.995 - - - - - - 0.995 - - - troponin I1, slow skeletal type [Source:HGNC Symbol;Acc:HGNC:11945]
23. SAMHD1 ENSGALG00000001231 5218 0.995 - - - - - - 0.995 - - - SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 [Source:NCBI gene;Acc:419125]
24. FANCE ENSGALG00000002561 3532 0.995 - - - - - - 0.995 - - - Fanconi anemia complementation group E
25. DOHH ENSGALG00000017524 9420 0.995 - - - - - - 0.995 - - - deoxyhypusine hydroxylase [Source:NCBI gene;Acc:427066]
26. MKKS ENSGALG00000009013 9301 0.995 - - - - - - 0.995 - - - McKusick-Kaufman syndrome [Source:NCBI gene;Acc:416737]
27. WRN ENSGALG00000040909 3645 0.995 - - - - - - 0.995 - - - Werner syndrome RecQ like helicase [Source:NCBI gene;Acc:422505]
28. NEIL1 ENSGALG00000001586 2292 0.995 - - - - - - 0.995 - - - nei like DNA glycosylase 1 [Source:NCBI gene;Acc:770068]
29. REPS1 ENSGALG00000013829 2271 0.995 - - - - - - 0.995 - - - RALBP1 associated Eps domain containing 1 [Source:NCBI gene;Acc:421678]
30. SDOS SDOS 66125 0.994 - - - - - - 0.994 - - -
31. DDT ENSGALG00000006350 16117 0.987 - - - - - - 0.987 - - - D-dopachrome tautomerase [Source:NCBI gene;Acc:416937]
32. SPINZ SPINZ 10341 0.957 - - - - - - - 0.957 - -
33. CCT6 CCT6 65150 0.95 - - - - - - 0.950 - - -
34. CDK8 ENSGALG00000017104 5956 0.95 - - - - - - - 0.950 - - cyclin dependent kinase 8, transcript variant X4
35. TMED2 ENSGALG00000003307 20704 0.92 - - - - 0.920 - - - - - transmembrane p24 trafficking protein 2 [Source:NCBI gene;Acc:416821]
36. WDR36 ENSGALG00000000247 11277 0.918 - - - - 0.918 - - - - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
37. MRPL14 ENSGALG00000010285 11820 0.91 - - - - - - - 0.910 - - mitochondrial ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:14279]
38. ZNF326 ENSGALG00000006113 15141 0.904 - - - - 0.904 - - - - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
39. FAM120A ENSGALG00000039316 28650 0.901 - - - - - - 0.901 - - - family with sequence similarity 120A, transcript variant X1
40. GLB1L2 ENSGALG00000001604 4057 0.899 - - - - 0.899 - - - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
41. DECR1 ENSGALG00000036990 6360 0.897 - - - - 0.897 - - - - - 2,4-dienoyl-CoA reductase 1 [Source:HGNC Symbol;Acc:HGNC:2753]
42. KDM1A ENSGALG00000033469 20632 0.897 - - - - 0.897 - - - - - lysine demethylase 1A [Source:HGNC Symbol;Acc:HGNC:29079]
43. LASP-2 LASP-2 4415 0.895 - - - - 0.895 - - - - -
44. B4GAL-T7 B4GAL-T7 12356 0.894 - - - - 0.894 - - - - -
45. DIABLO ENSGALG00000004412 9499 0.894 - - - - 0.894 - - - - - diablo IAP-binding mitochondrial protein, transcript variant X3
46. PAXIP1 ENSGALG00000036064 3120 0.892 - - - - 0.892 - - - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
47. SMS ENSGALG00000016379 11607 0.891 - - - - 0.891 - - - - - spermine synthase [Source:NCBI gene;Acc:418602]
48. OCIAD1 ENSGALG00000014081 12065 0.891 - - - - 0.891 - - - - - OCIA domain containing 1 [Source:HGNC Symbol;Acc:HGNC:16074]
49. MAP2K4 ENSGALG00000032178 5982 0.888 - - - - 0.888 - - - - - mitogen-activated protein kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6844]
50. LAP3 ENSGALG00000006334 21076 0.887 - - - - 0.887 - - - - - leucine aminopeptidase 3 [Source:NCBI gene;Acc:425306]
51. BCCIP ENSGALG00000006617 13291 0.887 - - - - 0.887 - - - - - BRCA2 and CDKN1A interacting protein [Source:HGNC Symbol;Acc:HGNC:978]
52. COPB2 ENSGALG00000005357 15208 0.887 - - - - 0.887 - - - - - coatomer protein complex subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:2232]
53. TMEM167A ENSGALG00000027332 13862 0.887 - - - - 0.887 - - - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
54. UTP15 ENSGALG00000013510 13122 0.886 - - - - 0.886 - - - - - UTP15, small subunit processome component [Source:NCBI gene;Acc:426152]
55. CCDC101 CCDC101 9111 0.886 - - - - 0.886 - - - - -
56. SOD2 ENSGALG00000011661 13178 0.886 - - - - 0.886 - - - - - superoxide dismutase 2 [Source:NCBI gene;Acc:374042]
57. TSPAN5 ENSGALG00000012227 8703 0.886 - - - - 0.886 - - - - - tetraspanin 5 [Source:HGNC Symbol;Acc:HGNC:17753]
58. ADSL ENSGALG00000012034 10280 0.886 - - - - 0.886 - - - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
59. AIP ENSGALG00000040247 4166 0.886 - - - - 0.886 - - - - - aryl hydrocarbon receptor interacting protein [Source:NCBI gene;Acc:395123]
60. RNF11 ENSGALG00000010539 8617 0.885 - - - - 0.885 - - - - - ring finger protein 11 [Source:NCBI gene;Acc:424631]
61. FAM18B1 ENSGALG00000001335 5177 0.883 - - - - 0.883 - - - - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
62. SRP68 ENSGALG00000002062 7370 0.883 - - - - 0.883 - - - - - signal recognition particle 68 [Source:NCBI gene;Acc:417363]
63. TXNDC9 ENSGALG00000032090 6804 0.883 - - - - 0.883 - - - - - thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]
64. MAP1LC3A ENSGALG00000038721 2230 0.882 - - - - 0.882 - - - - - microtubule associated protein 1 light chain 3 alpha
65. CLTC ENSGALG00000005139 22130 0.882 - - - - 0.882 - - - - - clathrin heavy chain [Source:NCBI gene;Acc:395272]
66. CNBP 42704 0.881 - - - - 0.881 - - - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
67. COPA ENSGALG00000009153 11618 0.881 - - - - 0.881 - - - - - coatomer protein complex subunit alpha [Source:NCBI gene;Acc:426906]
68. MTG1 ENSGALG00000003549 5032 0.881 - - - - 0.881 - - - - - mitochondrial ribosome associated GTPase 1 [Source:NCBI gene;Acc:791224]
69. HNRNPLL ENSGALG00000008504 14719 0.881 - - - - 0.881 - - - - - heterogeneous nuclear ribonucleoprotein L like [Source:NCBI gene;Acc:416702]
70. ZC3H15 ENSGALG00000041857 19808 0.881 - - - - 0.881 - - - - - zinc finger CCCH-type containing 15 [Source:NCBI gene;Acc:423992]
71. BTBD7 4136 0.88 - - - - 0.880 - - - - - BTB domain containing 7, transcript variant X2
72. gga-mir-1778 ENSGALG00000025181 8765 0.88 - - - - 0.880 - - - - - gga-mir-1778 [Source:miRBase;Acc:MI0007521]
73. MTA1 ENSGALG00000002803 11572 0.879 - - - - 0.879 - - - - - metastasis associated 1 [Source:NCBI gene;Acc:429060]
74. CRIPT ENSGALG00000010014 4311 0.878 - - - - 0.878 - - - - - CXXC repeat containing interactor of PDZ3 domain [Source:NCBI gene;Acc:421412]
75. WSB2 ENSGALG00000008151 13246 0.878 - - - - 0.878 - - - - - WD repeat and SOCS box containing 2 [Source:HGNC Symbol;Acc:HGNC:19222]
76. RBM15B 5416 0.878 - - - - 0.878 - - - - - RNA binding motif protein 15B
77. AEN ENSGALG00000044204 2633 0.877 - - - - 0.877 - - - - - apoptosis enhancing nuclease, transcript variant X1
78. C9orf89 C9orf89 3056 0.877 - - - - 0.877 - - - - -
79. EIF3J ENSGALG00000008187 43570 0.876 - - - - 0.876 - - - - - eukaryotic translation initiation factor 3 subunit J [Source:NCBI gene;Acc:415573]
80. TIA1 ENSGALG00000013879 16330 0.876 - - - - 0.876 - - - - - TIA1 cytotoxic granule associated RNA binding protein [Source:NCBI gene;Acc:771327]
81. CLSPN ENSGALG00000002346 2590 0.876 - - - - 0.876 - - - - - claspin [Source:NCBI gene;Acc:428223]
82. GMNN ENSGALG00000013626 15838 0.875 - - - - 0.875 - - - - - geminin, DNA replication inhibitor [Source:NCBI gene;Acc:421004]
83. ZNF217 ZNF217 14511 0.874 - - - - 0.874 - - - - -
84. SH3GLB1 ENSGALG00000006284 12764 0.874 - - - - 0.874 - - - - - SH3 domain containing GRB2 like endophilin B1 [Source:NCBI gene;Acc:424522]
85. SRSF6 ENSGALG00000000990 12424 0.874 - - - - 0.874 - - - - - serine and arginine rich splicing factor 6 [Source:NCBI gene;Acc:419116]
86. LEPREL4 LEPREL4 5609 0.874 - - - - 0.874 - - - - -
87. DYNC1LI1 ENSGALG00000011491 11011 0.873 - - - - 0.873 - - - - - dynein cytoplasmic 1 light intermediate chain 1 [Source:NCBI gene;Acc:420668]
88. RBM5 30998 0.872 - - - - 0.872 - - - - - RNA binding motif protein 5, transcript variant X1
89. TDRD3 ENSGALG00000016936 3412 0.872 - - - - 0.872 - - - - - tudor domain containing 3 [Source:NCBI gene;Acc:418823]
90. CDR2L ENSGALG00000026295 4142 0.872 - - - - 0.872 - - - - - cerebellar degeneration related protein 2 like [Source:HGNC Symbol;Acc:HGNC:29999]
91. NOL12 ENSGALG00000012410 5658 0.872 - - - - 0.872 - - - - - nucleolar protein 12
92. FBXW7 ENSGALG00000010103 5982 0.872 - - - - 0.872 - - - - - F-box and WD repeat domain containing 7 [Source:HGNC Symbol;Acc:HGNC:16712]
93. DARS ENSGALG00000012355 2887 0.872 - - - - 0.872 - - - - - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
94. SUGT1 ENSGALG00000016946 22881 0.872 - - - - 0.872 - - - - - SGT1 homolog, MIS12 kinetochore complex assembly cochaperone [Source:NCBI gene;Acc:418827]
95. RHBDF1 ENSGALG00000007434 2359 0.871 - - - - 0.871 - - - - - rhomboid 5 homolog 1 [Source:HGNC Symbol;Acc:HGNC:20561]
96. ITPK1 ENSGALG00000034898 4212 0.87 - - - - 0.870 - - - - - inositol-tetrakisphosphate 1-kinase [Source:NCBI gene;Acc:423421]
97. LSMD1 LSMD1 2562 0.87 - - - - 0.870 - - - - -
98. EIF4G3 ENSGALG00000010084 5881 0.87 - - - - 0.870 - - - - - eukaryotic translation initiation factor 4 gamma 3 [Source:HGNC Symbol;Acc:HGNC:3298]
99. PIK3CD ENSGALG00000002583 1036 0.868 - - - - 0.868 - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta [Source:NCBI gene;Acc:419444]
100. LFNG ENSGALG00000038515 5178 0.868 - - - - 0.868 - - - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]

There are 156 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA