Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBL3

Gene Name Gene ID Reads Annotation
UBL3 ENSGALG00000017084 7417 ubiquitin like 3 [Source:NCBI gene;Acc:418921]











Genes with expression patterns similar to UBL3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBL3 ENSGALG00000017084 7417 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin like 3 [Source:NCBI gene;Acc:418921]
2. TMED7 ENSGALG00000028484 21008 2.345 - - - - - - 0.702 0.835 - 0.808 Gallus gallus transmembrane p24 trafficking protein 7 (TMED7), mRNA. [Source:RefSeq mRNA;Acc:NM_001319030]
3. GXYLT1 ENSGALG00000009532 5682 1.702 - - - - - - 0.804 - - 0.898 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
4. UCHL3 ENSGALG00000016921 16208 1.682 - - - - - - 0.803 - - 0.879 ubiquitin C-terminal hydrolase L3 [Source:NCBI gene;Acc:395626]
5. GNL3 ENSGALG00000001613 10911 1.653 - - - - - - 0.703 0.950 - - G protein nucleolar 3 [Source:HGNC Symbol;Acc:HGNC:29931]
6. UPF2 ENSGALG00000033772 9548 1.652 - - - - - - 0.782 - - 0.870 UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
7. MRPL50 ENSGALG00000015543 11649 1.647 - - - - - - 0.760 - - 0.887 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
8. GGA.31975 GGA.31975 8825 1.641 - - - - - - 0.749 - - 0.892
9. SMC4 ENSGALG00000009553 15715 1.639 - - - - - - 0.772 - - 0.867 structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
10. NEO1 ENSGALG00000001774 10165 1.637 - - - - - - 0.769 - - 0.868 neogenin 1 [Source:HGNC Symbol;Acc:HGNC:7754]
11. MB21D1 2460 1.631 - - - - - - 0.759 - - 0.872 Mab-21 domain containing 1
12. MAN2A1 ENSGALG00000000255 4543 1.627 - - - - - - 0.744 - - 0.883 mannosidase alpha class 2A member 1 [Source:HGNC Symbol;Acc:HGNC:6824]
13. CZH9ORF80 CZH9ORF80 12760 1.609 - - - - - - 0.778 0.831 - -
14. VBP1 VBP1 14482 1.605 - - - - - - 0.769 0.836 - -
15. N4BP2 ENSGALG00000014281 3144 1.602 - - - - - - - 0.742 - 0.860 NEDD4 binding protein 2, transcript variant X6
16. ENSGALG00000009044 ENSGALG00000009044 14492 1.601 - - - - - - 0.705 - - 0.896
17. TXNDC5 ENSGALG00000012784 4678 1.597 - - - - - - 0.705 - - 0.892 thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
18. COX5A ENSGALG00000014121 55281 1.592 - - - - - - 0.717 - - 0.875 cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
19. SPTSSA ENSGALG00000025755 3361 1.59 - - - - - - 0.715 - - 0.875 serine palmitoyltransferase small subunit A [Source:NCBI gene;Acc:423318]
20. DGCR2 ENSGALG00000005891 8405 1.583 - - - - - - 0.783 - - 0.800 DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
21. ACAP2 ENSGALG00000007040 4182 1.581 - - - - - - 0.756 - - 0.825 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:424895]
22. ARL13B ENSGALG00000015412 2968 1.57 - - - - - - 0.710 - - 0.860 ADP ribosylation factor like GTPase 13B [Source:HGNC Symbol;Acc:HGNC:25419]
23. GSTAL2 ENSGALG00000028551 4899 1.561 - - - - - - 0.703 - - 0.858 glutathione S-transferase alpha-like 2, transcript variant X4
24. SP3 ENSGALG00000031796 8997 1.558 - - - - - - 0.715 - - 0.843 Sp3 transcription factor [Source:NCBI gene;Acc:395302]
25. ECI2 ENSGALG00000012809 3692 1.551 - - - - - - 0.705 - - 0.846 enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]
26. ZBED4 ENSGALG00000032659 5313 1.546 - - - - - - 0.723 - - 0.823 zinc finger BED-type containing 4 [Source:NCBI gene;Acc:417734]
27. COMMD7 ENSGALG00000006630 11491 1.543 - - - - - - 0.762 - - 0.781 COMM domain containing 7 [Source:NCBI gene;Acc:419286]
28. LOC776067 ENSGALG00000016808 9164 1.543 - - - - - - 0.835 - - 0.708 E3 SUMO-protein ligase RanBP2-like, transcript variant X50
29. CHRAC1 ENSGALG00000040823 5695 1.532 - - - - - - 0.727 - - 0.805 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
30. POLR1B ENSGALG00000032273 3845 1.528 - - - - - - 0.727 - - 0.801 RNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]
31. UBE2E3 ENSGALG00000020793 9517 1.528 - - - - - - 0.747 - - 0.781 ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
32. DHX38 ENSGALG00000000787 6913 1.524 - - - - - - 0.729 - - 0.795 DEAH-box helicase 38 [Source:NCBI gene;Acc:415875]
33. MTMR8 ENSGALG00000007590 6022 1.507 - - - - - - 0.717 - - 0.790 myotubularin related protein 8 [Source:NCBI gene;Acc:422312]
34. RPF2 ENSGALG00000037087 12788 1.499 - - - - - - 0.719 - - 0.780 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
35. CYB5R2 ENSGALG00000032372 7967 1.465 - - - - - - 0.749 - - 0.716 cytochrome b5 reductase 2 [Source:NCBI gene;Acc:408182]
36. NUBP1 ENSGALG00000007241 3791 1.459 - - - - - - 0.723 - - 0.736 nucleotide binding protein 1 [Source:NCBI gene;Acc:416634]
37. PSPC1 ENSGALG00000017142 13036 1.435 - - - - - - 0.719 - - 0.716 paraspeckle component 1 [Source:NCBI gene;Acc:418955]
38. PSMG3 ENSGALG00000004203 11240 0.954 - - - - - - - 0.954 - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
39. NOLC1 ENSGALG00000041124 12765 0.946 - - - - - - - 0.946 - - nucleolar and coiled-body phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:15608]
40. SRM ENSGALG00000003039 8331 0.939 - - - - - - - 0.939 - - spermidine synthase [Source:HGNC Symbol;Acc:HGNC:11296]
41. PCMT1 ENSGALG00000012388 7778 0.937 - - - - - - - 0.937 - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:NCBI gene;Acc:428607]
42. USP1 ENSGALG00000010957 8297 0.935 - - - - - - - 0.935 - - ubiquitin specific peptidase 1 [Source:NCBI gene;Acc:424685]
43. NF2 ENSGALG00000008073 4597 0.933 - - - - - - - 0.933 - - neurofibromin 2 [Source:NCBI gene;Acc:395158]
44. PLEKHG1 ENSGALG00000012395 2708 0.93 - - - - - - - - - 0.930 pleckstrin homology and RhoGEF domain containing G1 [Source:HGNC Symbol;Acc:HGNC:20884]
45. HEXA ENSGALG00000043828 4789 0.924 - - - - - - - - - 0.924 hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
46. TRIAP1 ENSGALG00000007199 4921 0.923 - - - - - - - 0.923 - - TP53 regulated inhibitor of apoptosis 1 [Source:NCBI gene;Acc:416977]
47. ARPC1B ENSGALG00000032588 2407 0.921 - - - - - - - - - 0.921 actin related protein 2/3 complex subunit 1B [Source:NCBI gene;Acc:416490]
48. RTN4R ENSGALG00000007732 1515 0.92 - - - - - - - - - 0.920 reticulon 4 receptor
49. PPM1E ENSGALG00000005061 2606 0.918 - - - - - - - - - 0.918 protein phosphatase, Mg2+/Mn2+ dependent 1E [Source:HGNC Symbol;Acc:HGNC:19322]
50. CPNE1 ENSGALG00000040856 610 0.915 - - - - - - - - - 0.915 copine 1 [Source:NCBI gene;Acc:419134]
51. MTERFD1 MTERFD1 3640 0.915 - - - - - - - - - 0.915
52. TMEM130 ENSGALG00000003569 949 0.914 - - - - - - - - - 0.914 transmembrane protein 130 [Source:HGNC Symbol;Acc:HGNC:25429]
53. TMEM237 ENSGALG00000008381 1317 0.914 - - - - - - - - - 0.914 transmembrane protein 237 [Source:NCBI gene;Acc:424084]
54. BBOX1 ENSGALG00000013297 4119 0.912 - - - - - - - - - 0.912 gamma-butyrobetaine hydroxylase 1 [Source:HGNC Symbol;Acc:HGNC:964]
55. GRTP1 ENSGALG00000016828 3145 0.909 - - - - - - - - - 0.909 growth hormone regulated TBC protein 1 [Source:HGNC Symbol;Acc:HGNC:20310]
56. SLC2A3 SLC2A3 527 0.908 - - - - - - - - - 0.908
57. PREX2 ENSGALG00000042354 134 0.908 - - - - - - - - - 0.908 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2
58. TP53BP1 ENSGALG00000042201 708 0.908 - - - - - - - - - 0.908 tumor protein p53 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:11999]
59. PNPT1 ENSGALG00000043545 1306 0.906 - - - - - - - - - 0.906 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]
60. CRYM ENSGALG00000002484 3558 0.906 - - - - - - - - - 0.906 crystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]
61. TANGO2 ENSGALG00000002056 1971 0.905 - - - - - - - - - 0.905 transport and golgi organization 2 homolog [Source:NCBI gene;Acc:416784]
62. PDPN ENSGALG00000030096 647 0.903 - - - - - - - - - 0.903 podoplanin, transcript variant X4
63. PROM1 ENSGALG00000014496 2494 0.903 - - - - - - - - - 0.903 prominin 1 [Source:NCBI gene;Acc:422825]
64. CPSF2 ENSGALG00000010783 5236 0.902 - - - - - - - - - 0.902 cleavage and polyadenylation specific factor 2 [Source:NCBI gene;Acc:423416]
65. TMEM243 ENSGALG00000006633 1592 0.902 - - - - - - - - - 0.902 transmembrane protein 243 [Source:HGNC Symbol;Acc:HGNC:21707]
66. RER1 ENSGALG00000021683 9074 0.902 - - - - - - - - - 0.902 retention in endoplasmic reticulum sorting receptor 1 [Source:NCBI gene;Acc:419397]
67. LPCAT2 ENSGALG00000003574 893 0.902 - - - - - - - - - 0.902 lysophosphatidylcholine acyltransferase 2 [Source:NCBI gene;Acc:415716]
68. GPX8 ENSGALG00000026704 4497 0.902 - - - - - - - - - 0.902 glutathione peroxidase 8 (putative) [Source:HGNC Symbol;Acc:HGNC:33100]
69. SPDL1 ENSGALG00000001942 4403 0.901 - - - - - - - - - 0.901 spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
70. RAD18 ENSGALG00000008368 7214 0.9 - - - - - - - - - 0.900 RAD18, E3 ubiquitin protein ligase [Source:NCBI gene;Acc:416114]
71. C10orf118 C10orf118 762 0.9 - - - - - - - - - 0.900
72. C9orf85 ENSGALG00000026001 4110 0.899 - - - - - - - 0.899 - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
73. SF3A3 ENSGALG00000001540 9664 0.898 - - - - - - - - - 0.898 splicing factor 3a subunit 3 [Source:HGNC Symbol;Acc:HGNC:10767]
74. FSTL4 ENSGALG00000031487 529 0.898 - - - - - - - - - 0.898 follistatin like 4 [Source:NCBI gene;Acc:395163]
75. C14orf80 C14orf80 1921 0.897 - - - - - - - - - 0.897
76. RNF219 ENSGALG00000016911 4458 0.897 - - - - - - - - - 0.897 ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
77. CNTRL ENSGALG00000001513 1773 0.897 - - - - - - - - - 0.897 centriolin [Source:NCBI gene;Acc:417121]
78. SOX6 ENSGALG00000006074 102 0.897 - - - - - - - - - 0.897 Gallus gallus SRY-box 6 (SOX6), mRNA. [Source:RefSeq mRNA;Acc:NM_001318451]
79. ITSN2 ENSGALG00000016504 651 0.896 - - - - - - - - - 0.896 intersectin 2 [Source:HGNC Symbol;Acc:HGNC:6184]
80. PTX3 ENSGALG00000028284 2984 0.895 - - - - - - - - - 0.895 pentraxin 3 [Source:NCBI gene;Acc:548626]
81. TMEM68 ENSGALG00000031835 1691 0.895 - - - - - - - - - 0.895 transmembrane protein 68 [Source:NCBI gene;Acc:421124]
82. FASTKD3 ENSGALG00000033521 1186 0.895 - - - - - - - - - 0.895 FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
83. CXADR ENSGALG00000015701 96 0.894 - - - - - - - - - 0.894 coxsackie virus and adenovirus receptor, transcript variant X2
84. 5S_2 5S_2 58 0.894 - - - - - - - - - 0.894
85. LRRN4 ENSGALG00000008815 481 0.894 - - - - - - - - - 0.894 leucine rich repeat neuronal 4 [Source:HGNC Symbol;Acc:HGNC:16208]
86. APBA3 ENSGALG00000000740 1249 0.893 - - - - - - - - - 0.893 amyloid beta precursor protein binding family A member 3 [Source:HGNC Symbol;Acc:HGNC:580]
87. ENSGALG00000005389 ENSGALG00000005389 553 0.893 - - - - - - - - - 0.893
88. FAM190B FAM190B 165 0.893 - - - - - - - - - 0.893
89. PM20D2 ENSGALG00000015779 1301 0.893 - - - - - - - - - 0.893 peptidase M20 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21408]
90. CPNE2 ENSGALG00000001316 236 0.893 - - - - - - - - - 0.893 copine 2 [Source:NCBI gene;Acc:415646]
91. ZNF6 ZNF6 138 0.893 - - - - - - - - - 0.893
92. FRMD3 ENSGALG00000012577 999 0.892 - - - - - - - - - 0.892 FERM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24125]
93. YAF2 ENSGALG00000009540 8452 0.892 - - - - - - - - - 0.892 YY1 associated factor 2 [Source:NCBI gene;Acc:417790]
94. FBXO38 ENSGALG00000038627 2658 0.892 - - - - - - - - - 0.892 F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]
95. WDSUB1 ENSGALG00000012574 2038 0.892 - - - - - - - - - 0.892 WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
96. CPT2 ENSGALG00000010681 3211 0.892 - - - - - - - - - 0.892 carnitine palmitoyltransferase 2 [Source:NCBI gene;Acc:424649]
97. IL10R2 IL10R2 72 0.892 - - - - - - - - - 0.892
98. CTSO ENSGALG00000009373 4186 0.891 - - - - - - - - - 0.891 cathepsin O [Source:NCBI gene;Acc:422410]
99. RBM5 30998 0.891 - - - - - - - - - 0.891 RNA binding motif protein 5, transcript variant X1
100. MPRIP ENSGALG00000004798 6700 0.891 - - - - - - - - - 0.891 myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]

There are 820 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA