Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBE3C

Gene Name Gene ID Reads Annotation
UBE3C ENSGALG00000006461 57 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]











Genes with expression patterns similar to UBE3C

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBE3C ENSGALG00000006461 57 5 - - 1.000 1.000 - 1.000 - 1.000 - 1.000 ubiquitin protein ligase E3C [Source:NCBI gene;Acc:420447]
2. GRPEL2 ENSGALG00000002673 105 2.602 - - - - - 0.717 - 0.896 - 0.989 GrpE like 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21060]
3. BCOR ENSGALG00000016245 85 1.888 - - - - - 0.896 - - - 0.992 BCL6 corepressor, transcript variant X8
4. SAMSN1 ENSGALG00000040926 88 1.814 - - 0.871 - - - - 0.943 - - SAM domain, SH3 domain and nuclear localization signals 1 [Source:NCBI gene;Acc:418470]
5. RPGR ENSGALG00000036284 186 1.807 - - - - - 0.858 - - - 0.949 retinitis pigmentosa GTPase regulator [Source:HGNC Symbol;Acc:HGNC:10295]
6. TRMT44 ENSGALG00000015594 1490 1.805 - - 0.823 - - - - - - 0.982 tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
7. ZDHHC20 ENSGALG00000017126 58 1.789 - - - - - 0.824 - 0.965 - - zinc finger DHHC-type containing 20 [Source:HGNC Symbol;Acc:HGNC:20749]
8. HOXA9 ENSGALG00000028983 9298 1.782 - - 0.914 - - - - - - 0.868 homeobox A9 [Source:NCBI gene;Acc:396096]
9. ENTHD2 684 1.764 - - - - - 0.844 - - - 0.920 ENTH domain containing 2, transcript variant X1
10. DTX2 ENSGALG00000001905 1475 1.747 - - - - - - - 0.751 - 0.996 deltex E3 ubiquitin ligase 2 [Source:HGNC Symbol;Acc:HGNC:15973]
11. CP ENSGALG00000030773 119 1.737 - - - - - 0.866 - 0.871 - - ceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]
12. CDC2L1 CDC2L1 894 1.729 - - - - - - - 0.822 - 0.907
13. VOPP1 ENSGALG00000042773 771 1.677 - - - - - 0.722 - - - 0.955 VOPP1, WBP1/VOPP1 family member [Source:HGNC Symbol;Acc:HGNC:34518]
14. REEP2 ENSGALG00000017365 338 1.677 - - 0.864 - - - - 0.813 - - receptor accessory protein 2 [Source:HGNC Symbol;Acc:HGNC:17975]
15. FMR1 ENSGALG00000009177 561 1.668 - - - - - - - 0.874 - 0.794 fragile X mental retardation 1 [Source:HGNC Symbol;Acc:HGNC:3775]
16. COL12A1 ENSGALG00000015908 1300 1.659 - - 0.707 - - - - - - 0.952 collagen type XII alpha 1 chain [Source:NCBI gene;Acc:395875]
17. CLIP1 ENSGALG00000004467 1058 1.651 - - - - - 0.769 - - - 0.882 CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:395784]
18. PDK1 ENSGALG00000013235 238 1.547 - - 0.825 - - - - 0.722 - - pyruvate dehydrogenase kinase 1 [Source:NCBI gene;Acc:425972]
19. CLIC3 ENSGALG00000038789 233 1.525 - - 0.766 - - 0.759 - - - - chloride intracellular channel 3 [Source:HGNC Symbol;Acc:HGNC:2064]
20. PRPF6 ENSGALG00000006001 8572 1.464 - - - - - 0.749 - - - 0.715 pre-mRNA processing factor 6 [Source:HGNC Symbol;Acc:HGNC:15860]
21. ROPN1L ENSGALG00000013006 97 1.457 - - 0.722 - - 0.735 - - - - rhophilin associated tail protein 1 like [Source:HGNC Symbol;Acc:HGNC:24060]
22. SCAP ENSGALG00000035768 2511 1.455 - - - - - - - 0.749 - 0.706 SREBF chaperone [Source:HGNC Symbol;Acc:HGNC:30634]
23. GPT2 ENSGALG00000033338 1054 1.448 - - 0.722 - - 0.726 - - - - glutamic--pyruvic transaminase 2 [Source:HGNC Symbol;Acc:HGNC:18062]
24. MMP11 ENSGALG00000005968 3 1 - - - 1.000 - - - - - - matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]
25. VILL ENSGALG00000005763 4 1 - - - 1.000 - - - - - - villin like [Source:HGNC Symbol;Acc:HGNC:30906]
26. CDH23 ENSGALG00000004653, ENSGALG00000036824 2 1 - - - 1.000 - - - - - - cadherin related 23, transcript variant X17
27. ENSGALG00000022857 ENSGALG00000022857 4 1 - - - 1.000 - - - - - -
28. DHX58 ENSGALG00000023821 15 1 - - - - - - - 1.000 - - Gallus gallus DExH-box helicase 58 (DHX58), mRNA. [Source:RefSeq mRNA;Acc:NM_001318408]
29. H2AFX ENSGALG00000045705 7 1 - - - 1.000 - - - - - - H2A histone family member X
30. CPB1 ENSGALG00000006834 25 1 - - - - - - - 1.000 - - carboxypeptidase B1 [Source:NCBI gene;Acc:424888]
31. TAGAP ENSGALG00000013747 34 1 - - - - - - - 1.000 - - T cell activation RhoGTPase activating protein [Source:HGNC Symbol;Acc:HGNC:15669]
32. ENSGALG00000018499 ENSGALG00000018499 100 1 - - - - - - - 1.000 - -
33. CMTR1 ENSGALG00000010149 12 1 - - - 1.000 - - - - - - cap methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:21077]
34. ENSGALG00000009777 ENSGALG00000009777 3 1 - - - 1.000 - - - - - -
35. KLF11 ENSGALG00000016440 65 1 - - - - - - - 1.000 - - Kruppel like factor 11 [Source:NCBI gene;Acc:421934]
36. ENSGALG00000008594 ENSGALG00000008594 54 0.999 - - - - - - - - - 0.999
37. CNKSR3 ENSGALG00000027159 41 0.999 - - - - - - - - - 0.999 CNKSR family member 3, transcript variant X2
38. SOS2 ENSGALG00000012273 41 0.999 - - - - - - - - - 0.999 SOS Ras/Rho guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:11188]
39. TM6SF2 ENSGALG00000029015 109 0.999 - - - - - - - - - 0.999 transmembrane 6 superfamily member 2 [Source:HGNC Symbol;Acc:HGNC:11861]
40. MAP3K8 ENSGALG00000007356 188 0.998 - - - - - - - - - 0.998 mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
41. ADAMTS12 55 0.998 - - - - - - - - - 0.998 ADAM metallopeptidase with thrombospondin type 1 motif 12, transcript variant X2
42. ATP2B2 ENSGALG00000030908 584 0.998 - - - - - - - - - 0.998 ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
43. AGMO ENSGALG00000010792 76 0.997 - - - - - - - - - 0.997 alkylglycerol monooxygenase [Source:HGNC Symbol;Acc:HGNC:33784]
44. ENSGALG00000018358 ENSGALG00000018358 101 0.996 - - - - - - - - - 0.996
45. ENSGALG00000004772 ENSGALG00000004772 173 0.996 - - - - - - - - - 0.996
46. TTI1 ENSGALG00000006791 1218 0.995 - - - - - - - - - 0.995 TELO2 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29029]
47. gga-mir-454 ENSGALG00000033526 22 0.995 - - - - - - - 0.995 - - gga-mir-454 [Source:miRBase;Acc:MI0006984]
48. IRF-4 IRF-4 19 0.994 - - - - - - - 0.994 - -
49. SLC38A1 ENSGALG00000009698 566 0.993 - - - - - - - - - 0.993 solute carrier family 38 member 1 [Source:NCBI gene;Acc:417806]
50. ENSGALG00000027621 ENSGALG00000027621 863 0.993 - - - - - - - - - 0.993
51. PTPRE ENSGALG00000009823 250 0.993 - - - - - - - - - 0.993 protein tyrosine phosphatase, receptor type E [Source:HGNC Symbol;Acc:HGNC:9669]
52. MAP3K3 ENSGALG00000000525 115 0.992 - - - - - - - - - 0.992 mitogen-activated protein kinase kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6855]
53. RGP1 ENSGALG00000002394 5937 0.992 - - - - - - - - - 0.992 RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
54. GPR114 GPR114 46 0.992 - - - - - - - - - 0.992
55. TFG ENSGALG00000015299 849 0.991 - - - - - - - - - 0.991 TRK-fused gene [Source:HGNC Symbol;Acc:HGNC:11758]
56. NFKBIE ENSGALG00000044525 633 0.99 - - - - - - - - - 0.990 NFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]
57. PROCR ENSGALG00000006547 645 0.99 - - - - - - - - - 0.990 protein C receptor [Source:NCBI gene;Acc:424867]
58. ZFPM2 ENSGALG00000040079 942 0.989 - - - - - - - - - 0.989 zinc finger protein, FOG family member 2 [Source:HGNC Symbol;Acc:HGNC:16700]
59. PRICKLE1 ENSGALG00000009556 60 0.989 - - - - - - - - - 0.989 prickle planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:17019]
60. STX6 3297 0.989 - - - - - - - - - 0.989 syntaxin 6
61. CCBL2 CCBL2 184 0.988 - - - - - - - - - 0.988
62. TRIM3 ENSGALG00000034004 110 0.987 - - - - - - - - - 0.987 tripartite motif containing 3 [Source:HGNC Symbol;Acc:HGNC:10064]
63. SERPINB6 ENSGALG00000012866 1582 0.987 - - - - - - - - - 0.987 serpin family B member 6 [Source:NCBI gene;Acc:420895]
64. VAV2 ENSGALG00000002699 503 0.986 - - - - - - - - - 0.986 vav guanine nucleotide exchange factor 2 [Source:NCBI gene;Acc:373938]
65. PDCD7 ENSGALG00000021027 3807 0.986 - - - - - - - - - 0.986 programmed cell death 7 [Source:HGNC Symbol;Acc:HGNC:8767]
66. RP9 ENSGALG00000035453 1186 0.986 - - - - - - - - - 0.986 retinitis pigmentosa 9 (autosomal dominant)
67. TYSND1 ENSGALG00000033807 716 0.984 - - - - - - - - - 0.984 trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
68. FOXP1 127 0.984 - - - - - - - - - 0.984 forkhead box P1, transcript variant X14
69. PSTPIP2 ENSGALG00000040136 37 0.981 - - - - - - - 0.981 - - proline-serine-threonine phosphatase interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:9581]
70. ENSGALG00000004643 ENSGALG00000004643 2297 0.981 - - - - - - - - - 0.981
71. RPRD2 ENSGALG00000014656 939 0.981 - - - - - - - - - 0.981 regulation of nuclear pre-mRNA domain containing 2 [Source:NCBI gene;Acc:425074]
72. SHPK ENSGALG00000004637 2386 0.981 - - - - - - - - - 0.981 sedoheptulokinase, transcript variant X1
73. C5orf24 ENSGALG00000006371 1573 0.98 - - - - - - - - - 0.980 chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
74. IDO2 ENSGALG00000024085 2 0.98 - - - 0.980 - - - - - - indoleamine 2,3-dioxygenase 2
75. HMGXB3 ENSGALG00000005770 119 0.98 - - - - - - - 0.980 - - HMG-box containing 3 [Source:HGNC Symbol;Acc:HGNC:28982]
76. CENPJ ENSGALG00000017148 1415 0.98 - - - - - - - - - 0.980 centromere protein J [Source:HGNC Symbol;Acc:HGNC:17272]
77. SH3GL1 ENSGALG00000001121 159 0.98 - - - - - - - 0.980 - - SH3 domain containing GRB2 like 1, endophilin A2 [Source:NCBI gene;Acc:395202]
78. DKK-1 DKK-1 146 0.98 - - - 0.980 - - - - - -
79. CYP2H1 CYP2H1 363 0.979 - - - - - 0.979 - - - -
80. HINFP ENSGALG00000006806 15 0.979 - - - - - 0.979 - - - - histone H4 transcription factor [Source:HGNC Symbol;Acc:HGNC:17850]
81. SERPINA12 SERPINA12 3 0.979 - - - - - 0.979 - - - -
82. ANGPTL3 ENSGALG00000010978 335 0.979 - - - - - 0.979 - - - - angiopoietin like 3 [Source:NCBI gene;Acc:100189558]
83. IFNAR2 ENSGALG00000041867 1596 0.979 - - - - - - - - - 0.979 interferon alpha and beta receptor subunit 2 [Source:NCBI gene;Acc:395664]
84. ENSGALG00000028413 ENSGALG00000028413 551 0.979 - - - - - 0.979 - - - -
85. GPR88 ENSGALG00000005252 4 0.979 - - - - - 0.979 - - - - G protein-coupled receptor 88 [Source:HGNC Symbol;Acc:HGNC:4539]
86. GLOD5 ENSGALG00000025991 17 0.979 - - - - - 0.979 - - - - glyoxalase domain containing 5 [Source:HGNC Symbol;Acc:HGNC:33358]
87. SENP7 ENSGALG00000044642 48 0.979 - - - - - - - 0.979 - - SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]
88. CTK-1 CTK-1 1618 0.979 - - - - - - - - - 0.979
89. TRIP4 ENSGALG00000030672 1255 0.979 - - - - - - - - - 0.979 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:HGNC:12310]
90. BTK ENSGALG00000004958 272 0.978 - - - - - - - 0.978 - - Bruton tyrosine kinase [Source:NCBI gene;Acc:374075]
91. HMGCS2 ENSGALG00000002960 54 0.978 - - - - - 0.978 - - - - 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
92. EEA1 ENSGALG00000011280 923 0.978 - - - - - - - - - 0.978 early endosome antigen 1 [Source:HGNC Symbol;Acc:HGNC:3185]
93. ZNF142 ENSGALG00000011393 2078 0.978 - - - - - - - - - 0.978 zinc finger protein 142 [Source:HGNC Symbol;Acc:HGNC:12927]
94. PALM2 ENSGALG00000015655 20 0.977 - - - - - 0.977 - - - - paralemmin 2 [Source:HGNC Symbol;Acc:HGNC:15845]
95. ENSGALG00000001919 ENSGALG00000001919 531 0.977 - - - - - - - - - 0.977
96. PCMTD2 ENSGALG00000005901 1833 0.977 - - - - - - - - - 0.977 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:15882]
97. TRIM24 ENSGALG00000012823 2725 0.976 - - - - - - - - - 0.976 tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
98. PVALB1 PVALB1 267 0.976 - - - - - - - 0.976 - -
99. LUZP1 ENSGALG00000025858 947 0.976 - - - - - - - - - 0.976 leucine zipper protein 1 [Source:HGNC Symbol;Acc:HGNC:14985]
100. HAGH ENSGALG00000005398 168 0.975 - - - - - - - 0.975 - - hydroxyacylglutathione hydrolase [Source:NCBI gene;Acc:416537]

There are 713 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA