Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Chicken data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for UBE3B

Gene Name Gene ID Reads Annotation
UBE3B ENSGALG00000013851 1672 ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]











Genes with expression patterns similar to UBE3B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBE3B ENSGALG00000013851 1672 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin protein ligase E3B [Source:NCBI gene;Acc:776286]
2. FTSJ2 FTSJ2 2951 1.712 - - 0.790 - - - 0.922 - - -
3. NSG1 ENSGALG00000015010 5829 1.632 - - 0.776 - - - 0.856 - - - neuron specific gene family member 1 [Source:NCBI gene;Acc:395251]
4. NAT9 ENSGALG00000007723 2098 1.618 - - 0.751 - - - 0.867 - - - N-acetyltransferase 9 (putative), transcript variant X7
5. KANK1 ENSGALG00000010158 3780 1.576 - - 0.706 - - - 0.870 - - - KN motif and ankyrin repeat domains 1 [Source:NCBI gene;Acc:395475]
6. ROR1 ENSGALG00000011019 2155 1.572 - - 0.721 - - - 0.851 - - - receptor tyrosine kinase like orphan receptor 1 [Source:NCBI gene;Acc:395179]
7. ETV4 ENSGALG00000036678 2424 1.557 - - 0.826 - - - 0.731 - - - ETS variant 4 [Source:HGNC Symbol;Acc:HGNC:3493]
8. AXIN1 ENSGALG00000029402 2802 1.554 - - 0.843 - - - 0.711 - - - axin 1 [Source:NCBI gene;Acc:395786]
9. RBM19 ENSGALG00000008289 10702 1.536 - - 0.766 - - - 0.770 - - - RNA binding motif protein 19 [Source:NCBI gene;Acc:417029]
10. LPAR1 ENSGALG00000015729 3874 1.484 - - 0.715 - - - 0.769 - - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
11. CCNK ENSGALG00000011138 6416 1.46 - - 0.716 - - - 0.744 - - - cyclin K [Source:NCBI gene;Acc:423446]
12. RIT1 ENSGALG00000014647 7174 1.421 - - 0.715 - - - 0.706 - - - Ras like without CAAX 1 [Source:NCBI gene;Acc:425068]
13. FAM183A 242 0.964 - - - - - - 0.964 - - - family with sequence similarity 183 member A, transcript variant 2
14. ENSGALG00000013233 ENSGALG00000013233 3265 0.962 - - - - - - 0.962 - - -
15. GAS6 ENSGALG00000016820 481 0.962 - - - - - - 0.962 - - - growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]
16. SDK2 ENSGALG00000031895 2682 0.958 - - - - - - 0.958 - - - sidekick cell adhesion molecule 2 [Source:NCBI gene;Acc:395215]
17. ENTPD8L ENSGALG00000008936 731 0.958 - - - - - - 0.958 - - - ectonucleoside triphosphate diphosphohydrolase 8-like
18. SNORA31 SNORA31 183 0.956 - - - - - - 0.956 - - -
19. SCAF4 ENSGALG00000033965 2027 0.956 - - - - - - 0.956 - - - SR-related CTD associated factor 4 [Source:NCBI gene;Acc:418492]
20. GRB14 ENSGALG00000020703 42 0.956 - - - - - - 0.956 - - - growth factor receptor bound protein 14 [Source:HGNC Symbol;Acc:HGNC:4565]
21. SCUBE1 ENSGALG00000014178 91 0.955 - - - - - - 0.955 - - - signal peptide, CUB domain and EGF like domain containing 1, transcript variant X4
22. NSRP1 ENSGALG00000004186 1683 0.955 - - - - - - 0.955 - - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
23. ENSGALG00000003619 ENSGALG00000003619 58 0.955 - - - - - - 0.955 - - -
24. TCTE1 ENSGALG00000010165 65 0.955 - - - - - - 0.955 - - - t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]
25. METTL24 ENSGALG00000041120 60 0.954 - - - - - - 0.954 - - - methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]
26. HEMK1 ENSGALG00000002253 40 0.954 - - - - - - 0.954 - - - HemK methyltransferase family member 1 [Source:HGNC Symbol;Acc:HGNC:24923]
27. ENSGALG00000016099 ENSGALG00000016099 138 0.953 - - - - - - 0.953 - - -
28. MXRA5 ENSGALG00000016635 352 0.953 - - - - - - 0.953 - - - matrix remodeling associated 5 [Source:HGNC Symbol;Acc:HGNC:7539]
29. DNAJC16 ENSGALG00000032832 750 0.953 - - - - - - 0.953 - - - DnaJ heat shock protein family (Hsp40) member C16 [Source:NCBI gene;Acc:429208]
30. ENSGALG00000026925 ENSGALG00000026925 119 0.953 - - - - - - 0.953 - - -
31. PTN ENSGALG00000040493 864 0.951 - - - - - - 0.951 - - - pleiotrophin [Source:NCBI gene;Acc:418125]
32. MESDC1 1013 0.951 - - - - - - 0.951 - - - mesoderm development candidate 1
33. HESX1 ENSGALG00000005506 203 0.95 - - - - - - 0.950 - - - HESX homeobox 1 [Source:NCBI gene;Acc:395864]
34. SPG11 ENSGALG00000008180 1890 0.95 - - - - - - 0.950 - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
35. TM2D3 ENSGALG00000026271 2566 0.95 - - - - - - 0.950 - - - TM2 domain containing 3 [Source:NCBI gene;Acc:415390]
36. PIK3R3 ENSGALG00000010335 374 0.95 - - - - - - 0.950 - - - phosphoinositide-3-kinase regulatory subunit 3, transcript variant X1
37. SGSM3 ENSGALG00000012033 1839 0.949 - - - - - - 0.949 - - - small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:HGNC:25228]
38. WDSUB1 ENSGALG00000012574 2038 0.948 - - - - - - 0.948 - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
39. SPAG9 ENSGALG00000034001 2314 0.948 - - - - - - 0.948 - - - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
40. LFNG ENSGALG00000038515 5178 0.945 - - - - - - 0.945 - - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:NCBI gene;Acc:395790]
41. UPK3BL ENSGALG00000001885 1650 0.945 - - - - - - 0.945 - - - uroplakin 3B-like
42. CEP290 ENSGALG00000011177 1559 0.945 - - - - - - 0.945 - - - centrosomal protein 290 [Source:HGNC Symbol;Acc:HGNC:29021]
43. PKN3 532 0.944 - - - - - - 0.944 - - - protein kinase N3, transcript variant X2
44. PLCE1 ENSGALG00000039528 151 0.943 - - - - - - 0.943 - - - phospholipase C epsilon 1
45. SULT2B1L1 ENSGALG00000023472 569 0.942 - - 0.942 - - - - - - - sulfotransferase family cytosolic 2B member 1-like 1
46. RAB1A ENSGALG00000031582 6929 0.941 - - - - - - 0.941 - - - RAB1A, member RAS oncogene family [Source:NCBI gene;Acc:421273]
47. C14orf80 C14orf80 1921 0.939 - - - - - - 0.939 - - -
48. MBNL2 ENSGALG00000016890 3162 0.939 - - - - - - 0.939 - - - muscleblind like splicing regulator 2 [Source:NCBI gene;Acc:418784]
49. NUP205 ENSGALG00000011662 4157 0.937 - - - - - - 0.937 - - - nucleoporin 205
50. ENSGALG00000028164 ENSGALG00000028164 3325 0.936 - - - - - - 0.936 - - -
51. AP3M1 ENSGALG00000005070 712 0.936 - - 0.936 - - - - - - - adaptor related protein complex 3 subunit mu 1 [Source:NCBI gene;Acc:423736]
52. MST1 ENSGALG00000002722 994 0.935 - - - - - - 0.935 - - - macrophage stimulating 1 (hepatocyte growth factor-like) [Source:NCBI gene;Acc:396135]
53. FAM193A ENSGALG00000015667 3075 0.935 - - - - - - 0.935 - - - family with sequence similarity 193 member A [Source:HGNC Symbol;Acc:HGNC:16822]
54. C19H17ORF85 C19H17ORF85 2538 0.932 - - 0.932 - - - - - - -
55. TRIM45 ENSGALG00000014818 1258 0.931 - - 0.931 - - - - - - - tripartite motif containing 45 [Source:HGNC Symbol;Acc:HGNC:19018]
56. PGAP2 ENSGALG00000027762 2583 0.931 - - - - - - 0.931 - - - post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:HGNC:17893]
57. SLC25A21 ENSGALG00000010117 536 0.93 - - - - - - 0.930 - - - solute carrier family 25 member 21 [Source:HGNC Symbol;Acc:HGNC:14411]
58. MPST ENSGALG00000040840 2122 0.93 - - - - - - 0.930 - - - mercaptopyruvate sulfurtransferase [Source:NCBI gene;Acc:418048]
59. NCAPG2 ENSGALG00000006525 2319 0.929 - - - - - - 0.929 - - - non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]
60. ZFYVE19 ENSGALG00000008460 2750 0.929 - - - - - - 0.929 - - - zinc finger FYVE-type containing 19 [Source:NCBI gene;Acc:423204]
61. GOLGA2 ENSGALG00000004881 677 0.928 - - 0.928 - - - - - - - golgin A2, transcript variant X7
62. AMMECR1L ENSGALG00000026728 2134 0.928 - - 0.928 - - - - - - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
63. FAM57A ENSGALG00000004820 1492 0.927 - - - - - - 0.927 - - - family with sequence similarity 57 member A [Source:HGNC Symbol;Acc:HGNC:29646]
64. NIN ENSGALG00000012361 2284 0.927 - - - - - - 0.927 - - - ninein [Source:HGNC Symbol;Acc:HGNC:14906]
65. ATP2B2 ENSGALG00000030908 584 0.926 - - 0.926 - - - - - - - ATPase plasma membrane Ca2+ transporting 2 [Source:HGNC Symbol;Acc:HGNC:815]
66. MGLL ENSGALG00000032736 612 0.925 - - - - - - 0.925 - - - monoglyceride lipase [Source:NCBI gene;Acc:416024]
67. SPTY2D1 ENSGALG00000006355 994 0.925 - - 0.925 - - - - - - - SPT2 chromatin protein domain containing 1 [Source:NCBI gene;Acc:423083]
68. SUGP1 ENSGALG00000042132 2771 0.925 - - - - - - 0.925 - - - SURP and G-patch domain containing 1 [Source:NCBI gene;Acc:428349]
69. ACOT9 ENSGALG00000016351 330 0.924 - - 0.924 - - - - - - - acyl-CoA thioesterase 9 [Source:NCBI gene;Acc:418600]
70. TM9SF4 ENSGALG00000006568 567 0.924 - - - - - - 0.924 - - - transmembrane 9 superfamily member 4 [Source:HGNC Symbol;Acc:HGNC:30797]
71. MBTPS1 ENSGALG00000003293 4843 0.923 - - - - - - 0.923 - - - membrane bound transcription factor peptidase, site 1 [Source:HGNC Symbol;Acc:HGNC:15456]
72. CCNE2 ENSGALG00000040794 1229 0.922 - - - - - - 0.922 - - - cyclin E2 [Source:NCBI gene;Acc:420231]
73. ENTPD5 ENSGALG00000010202 69 0.922 - - 0.922 - - - - - - - ectonucleoside triphosphate diphosphohydrolase 5 [Source:HGNC Symbol;Acc:HGNC:3367]
74. RPUSD1 ENSGALG00000005315 651 0.921 - - 0.921 - - - - - - - RNA pseudouridylate synthase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14173]
75. ERMP1 ENSGALG00000000438 1136 0.921 - - - - - - 0.921 - - - endoplasmic reticulum metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:23703]
76. Sep-02 Sep-02 206 0.921 - - 0.921 - - - - - - -
77. ITSN1 ENSGALG00000036677 5727 0.92 - - - - - - 0.920 - - - intersectin 1 [Source:HGNC Symbol;Acc:HGNC:6183]
78. METTL13 ENSGALG00000003206 1503 0.92 - - 0.920 - - - - - - - methyltransferase like 13 [Source:HGNC Symbol;Acc:HGNC:24248]
79. USP54 ENSGALG00000005232 2749 0.919 - - - - - - 0.919 - - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
80. ASB6 ENSGALG00000004378 1080 0.919 - - - - - - 0.919 - - - ankyrin repeat and SOCS box containing 6 [Source:NCBI gene;Acc:417194]
81. CCNL1 ENSGALG00000009699 1033 0.918 - - - - - - 0.918 - - - cyclin L1 [Source:HGNC Symbol;Acc:HGNC:20569]
82. ENSGALG00000002852 ENSGALG00000002852 2687 0.918 - - - - - - 0.918 - - -
83. C8H1ORF52 C8H1ORF52 118 0.918 - - 0.918 - - - - - - -
84. TPR ENSGALG00000005105 2924 0.918 - - - - - - 0.918 - - - translocated promoter region, nuclear basket protein [Source:HGNC Symbol;Acc:HGNC:12017]
85. XPO7 ENSGALG00000001838 1875 0.917 - - - - - - 0.917 - - - exportin 7 [Source:NCBI gene;Acc:426925]
86. ADAMTS2 ENSGALG00000032974 141 0.917 - - 0.917 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]
87. TUBA4A ENSGALG00000000433 1367 0.916 - - - - - - 0.916 - - - tubulin alpha 4a
88. WIPI1 ENSGALG00000004215 3359 0.916 - - - - - - 0.916 - - - WD repeat domain, phosphoinositide interacting 1 [Source:HGNC Symbol;Acc:HGNC:25471]
89. NT5C2 ENSGALG00000008179 1760 0.915 - - - - - - 0.915 - - - 5'-nucleotidase, cytosolic II [Source:NCBI gene;Acc:423871]
90. MGMT ENSGALG00000042949 53 0.915 - - 0.915 - - - - - - - O-6-methylguanine-DNA methyltransferase [Source:HGNC Symbol;Acc:HGNC:7059]
91. POMC ENSGALG00000016600 99 0.915 - - 0.915 - - - - - - - proopiomelanocortin [Source:NCBI gene;Acc:422011]
92. NCAPD3 ENSGALG00000001491 221 0.915 - - 0.915 - - - - - - - non-SMC condensin II complex subunit D3, transcript variant X3
93. KIAA0195 KIAA0195 48 0.915 - - 0.915 - - - - - - -
94. RPIA ENSGALG00000015960 2784 0.915 - - - - - - 0.915 - - - ribose 5-phosphate isomerase A [Source:NCBI gene;Acc:422931]
95. RHOC ENSGALG00000001569 53 0.914 - - 0.914 - - - - - - - ras homolog family member C [Source:NCBI gene;Acc:395869]
96. ENSGALG00000023180 ENSGALG00000023180 83 0.914 - - 0.914 - - - - - - -
97. GBGT1 ENSGALG00000003340 399 0.914 - - 0.914 - - - - - - - globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) [Source:NCBI gene;Acc:417163]
98. PLEKHG5 ENSGALG00000027476 42 0.913 - - 0.913 - - - - - - - pleckstrin homology and RhoGEF domain containing G5 [Source:HGNC Symbol;Acc:HGNC:29105]
99. GRIK3 ENSGALG00000002098 111 0.913 - - 0.913 - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
100. SRPK1 ENSGALG00000037546 1849 0.913 - - - - - - 0.913 - - - SRSF protein kinase 1 [Source:HGNC Symbol;Acc:HGNC:11305]

There are 504 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA