Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBE3A

Gene Name Gene ID Reads Annotation
UBE3A ENSGALG00000034944 5196 ubiquitin protein ligase E3A [Source:HGNC Symbol;Acc:HGNC:12496]











Genes with expression patterns similar to UBE3A

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBE3A ENSGALG00000034944 5196 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin protein ligase E3A [Source:HGNC Symbol;Acc:HGNC:12496]
2. CDC7 ENSGALG00000006051 3996 1.59 - - - - - - 0.751 0.839 - - cell division cycle 7 [Source:HGNC Symbol;Acc:HGNC:1745]
3. SFRP2 ENSGALG00000009241 4716 1.576 - - - - - - 0.732 0.844 - - secreted frizzled related protein 2 [Source:NCBI gene;Acc:395546]
4. CCDC88C ENSGALG00000040156 6191 1.567 - - 0.837 - - - 0.730 - - - coiled-coil domain containing 88C [Source:HGNC Symbol;Acc:HGNC:19967]
5. TMEM168 ENSGALG00000009443 2452 1.565 - - - - - - 0.729 0.836 - - transmembrane protein 168, transcript variant X1
6. TGS1 ENSGALG00000015340 5897 1.556 - - - 0.734 - - - 0.822 - - trimethylguanosine synthase 1 [Source:NCBI gene;Acc:421126]
7. TK2 ENSGALG00000034216 5394 1.533 - - - 0.743 - - 0.790 - - - thymidine kinase 2, mitochondrial [Source:NCBI gene;Acc:427551]
8. ENSGALG00000004132 ENSGALG00000004132 9287 1.46 - - - 0.720 - - 0.740 - - -
9. MRPL40 ENSGALG00000001587 20893 1.459 - - - 0.700 - - 0.759 - - - mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]
10. SCPEP1 ENSGALG00000003185 2322 1.458 - - - 0.747 - - 0.711 - - - serine carboxypeptidase 1 [Source:NCBI gene;Acc:417403]
11. VPS13D ENSGALG00000034777 2350 1.452 - - 0.717 - - - 0.735 - - - vacuolar protein sorting 13 homolog D [Source:HGNC Symbol;Acc:HGNC:23595]
12. PANK1 ENSGALG00000006431 2910 1.443 - - 0.718 0.725 - - - - - - pantothenate kinase 1 [Source:HGNC Symbol;Acc:HGNC:8598]
13. EAPP ENSGALG00000010007 5080 1.443 - - 0.702 - - - 0.741 - - - E2F associated phosphoprotein [Source:NCBI gene;Acc:423319]
14. UBE2E3 ENSGALG00000020793 9517 1.435 - - 0.733 - - - 0.702 - - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
15. STRAP ENSGALG00000013092 13100 1.428 - - - 0.717 - - - 0.711 - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
16. CUL3 ENSGALG00000005108 9571 1.419 - - - 0.701 - - 0.718 - - - cullin 3 [Source:HGNC Symbol;Acc:HGNC:2553]
17. WHSC2 WHSC2 3673 0.986 - - - - - - - 0.986 - -
18. PROSC 6856 0.985 - - - - - - - 0.985 - - proline synthetase cotranscribed homolog (bacterial), transcript variant X1
19. PFKP ENSGALG00000006939 10149 0.984 - - - - - - - 0.984 - - phosphofructokinase, platelet [Source:NCBI gene;Acc:428411]
20. LATS1 ENSGALG00000012386 3455 0.958 - - - - - - - 0.958 - - large tumor suppressor kinase 1 [Source:HGNC Symbol;Acc:HGNC:6514]
21. ODC1 ENSGALG00000016444 20119 0.919 - - - - - - - 0.919 - - ornithine decarboxylase 1 [Source:NCBI gene;Acc:421937]
22. C6H10ORF32 C6H10ORF32 7694 0.909 - - - - - - - 0.909 - -
23. CD2AP ENSGALG00000016720 8852 0.899 - - - - - - - 0.899 - - Gallus gallus CD2 associated protein (CD2AP), mRNA. [Source:RefSeq mRNA;Acc:NM_001318403]
24. ACTL6A ENSGALG00000009061 13013 0.882 - - - - - - - 0.882 - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
25. NDUFA8 ENSGALG00000040987 49453 0.864 - - - - - - - 0.864 - - NADH:ubiquinone oxidoreductase subunit A8 [Source:NCBI gene;Acc:417112]
26. UTP20 ENSGALG00000011643 3012 0.85 - - - - - - - 0.850 - - UTP20, small subunit processome component [Source:HGNC Symbol;Acc:HGNC:17897]
27. EIF2A ENSGALG00000010401 2201 0.85 - - - - - - - 0.850 - - eukaryotic translation initiation factor 2A [Source:NCBI gene;Acc:425042]
28. RAB9A ENSGALG00000016579 3262 0.848 - - - - - - - 0.848 - - RAB9A, member RAS oncogene family [Source:NCBI gene;Acc:418635]
29. RPP38 ENSGALG00000008794 1057 0.848 - - - - - - - 0.848 - - ribonuclease P/MRP subunit p38 [Source:NCBI gene;Acc:420530]
30. USP25 ENSGALG00000015693 2567 0.848 - - - - - - - 0.848 - - ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:HGNC:12624]
31. CA9 ENSGALG00000021340 1431 0.848 - - - - - - - 0.848 - - carbonic anhydrase 9 [Source:HGNC Symbol;Acc:HGNC:1383]
32. TBC1D32 ENSGALG00000014876 681 0.848 - - - - - - - 0.848 - - TBC1 domain family member 32 [Source:HGNC Symbol;Acc:HGNC:21485]
33. TMF1 ENSGALG00000013408 3344 0.848 - - - - - - - 0.848 - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
34. BFAR ENSGALG00000003111 1778 0.847 - - - - - - - 0.847 - - bifunctional apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:17613]
35. TATDN1 ENSGALG00000041072 1585 0.847 - - - - - - - 0.847 - - TatD DNase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24220]
36. ENSGALG00000012564 ENSGALG00000012564 426 0.847 - - - - - - - 0.847 - -
37. ACSBG2 ENSGALG00000001749 1681 0.847 - - - - - - - 0.847 - - acyl-CoA synthetase bubblegum family member 2 [Source:NCBI gene;Acc:420090]
38. AP1S2 ENSGALG00000016551 421 0.847 - - - - - - - 0.847 - - adaptor related protein complex 1 subunit sigma 2 [Source:NCBI gene;Acc:418621]
39. JARID2 ENSGALG00000012702 4280 0.847 - - - - - - - 0.847 - - jumonji and AT-rich interaction domain containing 2 [Source:NCBI gene;Acc:420839]
40. USP54 ENSGALG00000005232 2749 0.846 - - - - - - - 0.846 - - ubiquitin specific peptidase 54 [Source:HGNC Symbol;Acc:HGNC:23513]
41. APC ENSGALG00000000220 1266 0.846 - - - - - - - 0.846 - - APC, WNT signaling pathway regulator, transcript variant X12
42. SLC16A2 ENSGALG00000007748 446 0.846 - - - - - - - 0.846 - - Gallus gallus solute carrier family 16 member 2 (SLC16A2), mRNA. [Source:RefSeq mRNA;Acc:NM_001321737]
43. CCM2 ENSGALG00000005612 323 0.846 - - - - - - - 0.846 - - CCM2 scaffold protein [Source:NCBI gene;Acc:420410]
44. C3H6ORF154 C3H6ORF154 1078 0.846 - - - - - - - 0.846 - -
45. CTTN ENSGALG00000007700 709 0.846 - - - - - - - 0.846 - - cortactin [Source:NCBI gene;Acc:396455]
46. IRF2BPL ENSGALG00000041616 2835 0.845 - - - - - - - 0.845 - - interferon regulatory factor 2 binding protein like [Source:HGNC Symbol;Acc:HGNC:14282]
47. RGCC ENSGALG00000016954 1282 0.845 - - - - - - - 0.845 - - regulator of cell cycle [Source:HGNC Symbol;Acc:HGNC:20369]
48. GOLGA1 ENSGALG00000001025 334 0.845 - - - - - - - 0.845 - - golgin A1 [Source:HGNC Symbol;Acc:HGNC:4424]
49. SLC38A11 ENSGALG00000011052 386 0.845 - - - - - - - 0.845 - - solute carrier family 38 member 11 [Source:HGNC Symbol;Acc:HGNC:26836]
50. MAN2A2 ENSGALG00000033790 2717 0.845 - - - - - - - 0.845 - - mannosidase alpha class 2A member 2 [Source:HGNC Symbol;Acc:HGNC:6825]
51. MSC ENSGALG00000037777 1109 0.845 - - - - - - - 0.845 - - musculin [Source:HGNC Symbol;Acc:HGNC:7321]
52. RAB35 ENSGALG00000007308 6300 0.845 - - - - - - - 0.845 - - RAB35, member RAS oncogene family [Source:NCBI gene;Acc:416983]
53. NPHP3 ENSGALG00000034586 1465 0.845 - - - - - - - 0.845 - - nephrocystin 3, transcript variant X1
54. ITPR1 ENSGALG00000008294 1226 0.844 - - - - - - - 0.844 - - inositol 1,4,5-trisphosphate receptor type 1 [Source:NCBI gene;Acc:395412]
55. LONRF2 ENSGALG00000016768 193 0.844 - - - - - - - 0.844 - - LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]
56. PIGG ENSGALG00000015349 314 0.844 - - - - - - - 0.844 - - phosphatidylinositol glycan anchor biosynthesis class G [Source:HGNC Symbol;Acc:HGNC:25985]
57. MSANTD1 ENSGALG00000015628 154 0.844 - - - - - - - 0.844 - - Myb/SANT DNA binding domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33741]
58. HES5 ENSGALG00000001141 6514 0.844 - - - - - - - 0.844 - - hes family bHLH transcription factor 5 [Source:NCBI gene;Acc:419392]
59. KIAA1191 ENSGALG00000003370 2599 0.844 - - - - - - - 0.844 - - KIAA1191 [Source:NCBI gene;Acc:416230]
60. OXSR1 ENSGALG00000005979 2905 0.843 - - - - - - - 0.843 - - oxidative stress responsive 1
61. ATG13 ENSGALG00000008347 7374 0.842 - - - - - - - 0.842 - - autophagy related 13 [Source:HGNC Symbol;Acc:HGNC:29091]
62. WDFY1 ENSGALG00000005158 2512 0.842 - - - - - - - 0.842 - - WD repeat and FYVE domain containing 1 [Source:NCBI gene;Acc:424806]
63. LPAR1 ENSGALG00000015729 3874 0.842 - - - - - - - 0.842 - - lysophosphatidic acid receptor 1 [Source:NCBI gene;Acc:427339]
64. DFFA ENSGALG00000002820 2046 0.841 - - - - - - - 0.841 - - DNA fragmentation factor subunit alpha [Source:HGNC Symbol;Acc:HGNC:2772]
65. GCN1L1 GCN1L1 4601 0.841 - - - - - - - 0.841 - -
66. BET1 ENSGALG00000024485 2451 0.841 - - - - - - - 0.841 - - Bet1 golgi vesicular membrane trafficking protein [Source:NCBI gene;Acc:420563]
67. COPG2 ENSGALG00000008144 4542 0.839 - - - - - - - 0.839 - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
68. HSBP1 ENSGALG00000043039 2365 0.839 - - - - - - - 0.839 - - heat shock factor binding protein 1 [Source:NCBI gene;Acc:415813]
69. TMEM135 2283 0.838 - - - - - - - 0.838 - - transmembrane protein 135, transcript variant X4
70. FBXO28 ENSGALG00000009331 2871 0.838 - - - - - - - 0.838 - - F-box protein 28 [Source:HGNC Symbol;Acc:HGNC:29046]
71. EMG1 ENSGALG00000014568 8102 0.837 - - - - - - - 0.837 - - EMG1, N1-specific pseudouridine methyltransferase [Source:NCBI gene;Acc:418292]
72. KLF5 ENSGALG00000016927 1080 0.835 - - - - - - - 0.835 - - Kruppel like factor 5 [Source:HGNC Symbol;Acc:HGNC:6349]
73. ACOT13 ENSGALG00000013632 5550 0.835 - - - - - - - 0.835 - - acyl-CoA thioesterase 13 [Source:HGNC Symbol;Acc:HGNC:20999]
74. PMPCB ENSGALG00000008280 6357 0.835 - - - - - - - 0.835 - - peptidase, mitochondrial processing beta subunit [Source:NCBI gene;Acc:417718]
75. HSD17B2 ENSGALG00000005467 275 0.834 - - - - - - - 0.834 - - hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]
76. NFU1 ENSGALG00000030200 6882 0.833 - - - - - - - 0.833 - - NFU1 iron-sulfur cluster scaffold [Source:NCBI gene;Acc:419513]
77. UBR2 ENSGALG00000009906 7717 0.831 - - - - - - - 0.831 - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
78. MGAT4B ENSGALG00000005924 2663 0.83 - - - - - - - 0.830 - - alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B [Source:HGNC Symbol;Acc:HGNC:7048]
79. OSR2 ENSGALG00000037695 2010 0.83 - - - - - - - 0.830 - - odd-skipped related transciption factor 2 [Source:NCBI gene;Acc:771523]
80. MYBBP1A ENSGALG00000001363 10331 0.829 - - - - - - - 0.829 - - MYB binding protein 1a [Source:HGNC Symbol;Acc:HGNC:7546]
81. GALNT1 ENSGALG00000013135 13583 0.826 - - - - - - 0.826 - - - polypeptide N-acetylgalactosaminyltransferase 1 [Source:NCBI gene;Acc:420955]
82. AFAP1L2 ENSGALG00000008999 1305 0.825 - - - - - - - 0.825 - - actin filament associated protein 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25901]
83. AP3S1 ENSGALG00000002341 12388 0.824 - - - - - - - 0.824 - - adaptor related protein complex 3 sigma 1 subunit [Source:NCBI gene;Acc:427389]
84. CCNH ENSGALG00000015641 8051 0.824 - - - - - - 0.824 - - - cyclin H [Source:HGNC Symbol;Acc:HGNC:1594]
85. DGCR6 ENSGALG00000027369 7882 0.823 - - - - - - 0.823 - - - DiGeorge syndrome critical region gene 6 [Source:NCBI gene;Acc:395907]
86. CXorf56 ENSGALG00000008652 7848 0.82 - - - - - - - 0.820 - - chromosome X open reading frame 56 [Source:HGNC Symbol;Acc:HGNC:26239]
87. SIGMAR1 ENSGALG00000028996 12267 0.82 - - - - - - - 0.820 - - sigma non-opioid intracellular receptor 1 [Source:NCBI gene;Acc:100859748]
88. COMMD4 ENSGALG00000001572 31664 0.819 - - - - - - - 0.819 - - COMM domain containing 4 [Source:NCBI gene;Acc:770048]
89. WDR36 ENSGALG00000000247 11277 0.819 - - - - - - - 0.819 - - WD repeat domain 36 [Source:NCBI gene;Acc:415609]
90. P4HA1 ENSGALG00000004325 4703 0.818 - - - - - - 0.818 - - - prolyl 4-hydroxylase subunit alpha 1 [Source:NCBI gene;Acc:423704]
91. CDC23 ENSGALG00000007610 11945 0.818 - - - - - - - 0.818 - - cell division cycle 23 [Source:HGNC Symbol;Acc:HGNC:1724]
92. LMAN2 ENSGALG00000033232 11740 0.817 - - - - - - - 0.817 - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
93. DOCK7 6385 0.813 - - - - - - - 0.813 - - dedicator of cytokinesis 7, transcript variant X3
94. NKRF ENSGALG00000008645 3531 0.813 - - - - - - 0.813 - - - NFKB repressing factor [Source:NCBI gene;Acc:422370]
95. BPTF ENSGALG00000038222 7521 0.812 - - - - - - - 0.812 - - bromodomain PHD finger transcription factor [Source:HGNC Symbol;Acc:HGNC:3581]
96. CENPW ENSGALG00000027454 7517 0.811 - - - - - - 0.811 - - - centromere protein W [Source:NCBI gene;Acc:421716]
97. DDX47 ENSGALG00000011794 4255 0.811 - - - - - - - 0.811 - - DEAD-box helicase 47 [Source:NCBI gene;Acc:417959]
98. HECTD1 ENSGALG00000009946 1946 0.81 - - - - - - - 0.810 - - HECT domain E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:20157]
99. LYPD6B ENSGALG00000028759 831 0.809 - - - - - - - 0.809 - - LY6/PLAUR domain containing 6B [Source:HGNC Symbol;Acc:HGNC:27018]
100. CYP51A1 ENSGALG00000009365 6996 0.808 - - - - - - - 0.808 - - cytochrome P450 family 51 subfamily A member 1 [Source:NCBI gene;Acc:420548]

There are 407 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA