Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBE2N

Gene Name Gene ID Reads Annotation
UBE2N ENSGALG00000030515 32059 ubiquitin conjugating enzyme E2 N [Source:NCBI gene;Acc:417898]











Genes with expression patterns similar to UBE2N

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBE2N ENSGALG00000030515 32059 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin conjugating enzyme E2 N [Source:NCBI gene;Acc:417898]
2. COMMD8 ENSGALG00000026279 13509 1.726 - - - - 0.859 - 0.867 - - - COMM domain containing 8 [Source:NCBI gene;Acc:422769]
3. PRDX4 ENSGALG00000016357 32208 1.586 - - - - 0.830 - 0.756 - - - peroxiredoxin 4 [Source:HGNC Symbol;Acc:HGNC:17169]
4. EXO1 ENSGALG00000010748 7572 1.568 - - - - 0.835 - - 0.733 - - exonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3511]
5. NDUFA11 ENSGALG00000021692 75804 1.557 - - - - 0.714 - 0.843 - - - NADH:ubiquinone oxidoreductase subunit A11
6. JSC JSC 7982 1.499 - - - - 0.776 - - 0.723 - -
7. GARS ENSGALG00000005694 18264 1.412 - - 0.704 - - - - 0.708 - - glycyl-tRNA synthetase [Source:NCBI gene;Acc:428403]
8. ARGLU1 ENSGALG00000016855 25633 0.966 - - - - - - 0.966 - - - arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
9. HNRNPU ENSGALG00000010671 56560 0.966 - - - - - - 0.966 - - - heterogeneous nuclear ribonucleoprotein U [Source:HGNC Symbol;Acc:HGNC:5048]
10. PRDX1 ENSGALG00000010243 151918 0.954 - - - - - - 0.954 - - - peroxiredoxin 1 [Source:NCBI gene;Acc:424598]
11. ST13 ENSGALG00000012007 25670 0.948 - - - - - - 0.948 - - - ST13, Hsp70 interacting protein [Source:NCBI gene;Acc:418003]
12. CCT5 ENSGALG00000013041 56190 0.948 - - - - - - 0.948 - - - chaperonin containing TCP1 subunit 5 [Source:NCBI gene;Acc:420930]
13. TRA2A ENSGALG00000010973 37101 0.943 - - - - - - 0.943 - - - transformer 2 alpha homolog [Source:NCBI gene;Acc:420618]
14. HDLBP ENSGALG00000005823 24636 0.94 - - - - - - 0.940 - - - high density lipoprotein binding protein [Source:NCBI gene;Acc:395984]
15. CKAP4 ENSGALG00000012659 36398 0.935 - - - - - - 0.935 - - - cytoskeleton associated protein 4 [Source:HGNC Symbol;Acc:HGNC:16991]
16. BUB3 ENSGALG00000009681 36055 0.935 - - - - - - 0.935 - - - BUB3, mitotic checkpoint protein [Source:NCBI gene;Acc:423949]
17. ENSGALG00000000360 ENSGALG00000000360 15320 0.934 - - - - - - 0.934 - - -
18. TBL1X ENSGALG00000040006 28597 0.932 - - - - - - 0.932 - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
19. TPI1 ENSGALG00000014526 43273 0.923 - - - - - - 0.923 - - - triosephosphate isomerase 1 [Source:NCBI gene;Acc:396435]
20. BRIX1 ENSGALG00000003373 27878 0.92 - - - - - - 0.920 - - - BRX1, biogenesis of ribosomes [Source:NCBI gene;Acc:427433]
21. PELI1 ENSGALG00000008837 11561 0.919 - - - - - - 0.919 - - - pellino E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:421279]
22. WLS ENSGALG00000011238 20969 0.915 - - - - - - 0.915 - - - wntless Wnt ligand secretion mediator [Source:NCBI gene;Acc:424707]
23. MRPS26 ENSGALG00000014118 27422 0.912 - - - - - - 0.912 - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
24. ZDHHC6 ENSGALG00000008870 16575 0.91 - - - - - - 0.910 - - - zinc finger DHHC-type containing 6 [Source:HGNC Symbol;Acc:HGNC:19160]
25. RPF1 ENSGALG00000008796 9809 0.906 - - - - - - 0.906 - - - ribosome production factor 1 homolog
26. ENSGALG00000013825 ENSGALG00000013825 16473 0.905 - - - - - - 0.905 - - -
27. EZH2 ENSGALG00000043399 15881 0.903 - - - - - - 0.903 - - - enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]
28. ABRACL ENSGALG00000013826 19445 0.902 - - - - - - 0.902 - - - ABRA C-terminal like [Source:NCBI gene;Acc:770205]
29. ACTR6 ENSGALG00000040976 31271 0.9 - - - - - - 0.900 - - - ARP6 actin-related protein 6 homolog [Source:NCBI gene;Acc:395348]
30. RPS25 ENSGALG00000007699 156127 0.899 - - - - - - 0.899 - - - ribosomal protein S25 [Source:HGNC Symbol;Acc:HGNC:10413]
31. CDC5L ENSGALG00000016704 22893 0.898 - - - - - - 0.898 - - - cell division cycle 5 like [Source:HGNC Symbol;Acc:HGNC:1743]
32. MOB4 ENSGALG00000008128 10322 0.898 - - - - - - 0.898 - - - MOB family member 4, phocein [Source:NCBI gene;Acc:429007]
33. DYNLRB1 ENSGALG00000034509 28361 0.894 - - - - 0.894 - - - - - dynein light chain roadblock-type 1
34. PNRC2 ENSGALG00000004122 19228 0.894 - - - - 0.894 - - - - - proline rich nuclear receptor coactivator 2 [Source:NCBI gene;Acc:419688]
35. SNRPB2 28675 0.894 - - - - - - 0.894 - - - small nuclear ribonucleoprotein polypeptide B2
36. CNBP 42704 0.893 - - - - - - 0.893 - - - CCHC-type zinc finger nucleic acid binding protein, transcript variant X7
37. OLA1 ENSGALG00000009325 26414 0.891 - - - - 0.891 - - - - - Obg like ATPase 1 [Source:NCBI gene;Acc:424144]
38. GBAS 18453 0.888 - - - - 0.888 - - - - - glioblastoma amplified sequence
39. MRPS15 ENSGALG00000044433 15356 0.888 - - - - - - 0.888 - - - mitochondrial ribosomal protein S15 [Source:HGNC Symbol;Acc:HGNC:14504]
40. TBCA ENSGALG00000004353 18510 0.886 - - - - 0.886 - - - - - tubulin folding cofactor A [Source:NCBI gene;Acc:416367]
41. PPP3CB ENSGALG00000005243 8794 0.886 - - - - - - 0.886 - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
42. PSMC2 ENSGALG00000008236 25980 0.886 - - - - 0.886 - - - - - proteasome 26S subunit, ATPase 2 [Source:NCBI gene;Acc:417716]
43. RAP1B ENSGALG00000009927 26562 0.885 - - - - 0.885 - - - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
44. MRPS36 ENSGALG00000014789 7584 0.883 - - - - - - 0.883 - - - mitochondrial ribosomal protein S36 [Source:HGNC Symbol;Acc:HGNC:16631]
45. ANLN 10479 0.883 - - - - - - 0.883 - - - anillin actin binding protein, transcript variant X2
46. EXOSC7 ENSGALG00000030084 8654 0.881 - - - - - - 0.881 - - - exosome component 7 [Source:NCBI gene;Acc:420704]
47. LARP1 ENSGALG00000040109 14808 0.88 - - - - 0.880 - - - - - La ribonucleoprotein domain family member 1 [Source:HGNC Symbol;Acc:HGNC:29531]
48. SMC2 ENSGALG00000015691 34013 0.879 - - - - 0.879 - - - - - structural maintenance of chromosomes 2 [Source:NCBI gene;Acc:396156]
49. SRSF3 ENSGALG00000000533 51281 0.879 - - - - 0.879 - - - - - serine and arginine rich splicing factor 3 [Source:NCBI gene;Acc:419815]
50. RPL24 ENSGALG00000015339 227460 0.879 - - - - 0.879 - - - - - ribosomal protein L24 [Source:NCBI gene;Acc:418401]
51. NAA25 ENSGALG00000041821 12729 0.879 - - - - 0.879 - - - - - N(alpha)-acetyltransferase 25, NatB auxiliary subunit [Source:NCBI gene;Acc:416883]
52. TRIB2 ENSGALG00000016457 17641 0.878 - - - - - - 0.878 - - - tribbles pseudokinase 2 [Source:NCBI gene;Acc:378919]
53. RNF13 ENSGALG00000010411 8749 0.878 - - - - - - 0.878 - - - ring finger protein 13 [Source:NCBI gene;Acc:396303]
54. C20H20ORF24 ENSGALG00000001054 22026 0.878 - - - - 0.878 - - - - - chromosome 20 open reading frame, human C20orf24 [Source:NCBI gene;Acc:768550]
55. SEC61G ENSGALG00000037863 83362 0.877 - - - - - - 0.877 - - - Sec61 translocon gamma subunit [Source:NCBI gene;Acc:776639]
56. CHPKCI CHPKCI 36217 0.877 - - - - - - 0.877 - - -
57. PTPN12 9302 0.877 - - - - 0.877 - - - - - protein tyrosine phosphatase, non-receptor type 12
58. CCT4 ENSGALG00000008812 78267 0.876 - - - - 0.876 - - - - - chaperonin containing TCP1 subunit 4 [Source:NCBI gene;Acc:395414]
59. PAPOLA ENSGALG00000033099 20532 0.874 - - - - 0.874 - - - - - poly(A) polymerase alpha [Source:NCBI gene;Acc:395878]
60. HSPA8 ENSGALG00000006512 124825 0.874 - - - - 0.874 - - - - - heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
61. SERBP1 ENSGALG00000011229 30489 0.871 - - - - - - 0.871 - - - SERPINE1 mRNA binding protein 1 [Source:NCBI gene;Acc:424706]
62. STRAP ENSGALG00000013092 13100 0.871 - - - - 0.871 - - - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
63. PSMD13 ENSGALG00000043684 14720 0.869 - - - - - - 0.869 - - - proteasome 26S subunit, non-ATPase 13 [Source:HGNC Symbol;Acc:HGNC:9558]
64. MYBL2 ENSGALG00000003503 15875 0.868 - - - - - - 0.868 - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
65. OGT ENSGALG00000005425 31074 0.867 - - - - 0.867 - - - - - O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]
66. PCBP4 ENSGALG00000027695 7937 0.865 - - - - 0.865 - - - - - poly(rC) binding protein 4 [Source:HGNC Symbol;Acc:HGNC:8652]
67. CTNNBL1 ENSGALG00000006817 6765 0.864 - - - - - - 0.864 - - - catenin beta like 1 [Source:HGNC Symbol;Acc:HGNC:15879]
68. USO1 ENSGALG00000010878 9506 0.863 - - - - - - 0.863 - - - USO1 vesicle transport factor [Source:NCBI gene;Acc:422575]
69. EPHA3 ENSGALG00000015403 9811 0.863 - - - - - - 0.863 - - - EPH receptor A3 [Source:NCBI gene;Acc:396402]
70. SDOS SDOS 66125 0.862 - - - - 0.862 - - - - -
71. RCAN3 ENSGALG00000004282 7778 0.862 - - - - 0.862 - - - - - RCAN family member 3 [Source:NCBI gene;Acc:419698]
72. IGDCC4 ENSGALG00000007410 5457 0.861 - - - - 0.861 - - - - - immunoglobulin superfamily DCC subclass member 4 [Source:HGNC Symbol;Acc:HGNC:13770]
73. IGBP1 ENSGALG00000044628 9200 0.86 - - - - 0.860 - - - - - immunoglobulin (CD79A) binding protein 1, transcript variant X3
74. METTL23 ENSGALG00000001790 7906 0.86 - - - - 0.860 - - - - - methyltransferase like 23 [Source:HGNC Symbol;Acc:HGNC:26988]
75. SKP2 ENSGALG00000003547 14637 0.859 - - - - 0.859 - - - - - S-phase kinase associated protein 2 [Source:NCBI gene;Acc:427437]
76. FHL3 ENSGALG00000035187 9753 0.859 - - - - - - 0.859 - - - four and a half LIM domains 3 [Source:HGNC Symbol;Acc:HGNC:3704]
77. DHFR ENSGALG00000026757 18478 0.859 - - - - 0.859 - - - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
78. NOP58 ENSGALG00000008454 34630 0.858 - - - - 0.858 - - - - - NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]
79. MRPS34 ENSGALG00000001792 14262 0.858 - - - - - - 0.858 - - - mitochondrial ribosomal protein S34 [Source:NCBI gene;Acc:426987]
80. CCAR1 ENSGALG00000004108 13219 0.858 - - - - - - 0.858 - - - cell division cycle and apoptosis regulator 1 [Source:HGNC Symbol;Acc:HGNC:24236]
81. TTF1 4214 0.857 - - - - - - 0.857 - - - transcription termination factor 1
82. AATF ENSGALG00000005420 6501 0.857 - - - - 0.857 - - - - - apoptosis antagonizing transcription factor [Source:NCBI gene;Acc:417653]
83. GFPT1 ENSGALG00000036391 14025 0.857 - - - - 0.857 - - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
84. POLR2B ENSGALG00000011387 4864 0.855 - - - - 0.855 - - - - - RNA polymerase II subunit B [Source:NCBI gene;Acc:422621]
85. ATP2A2 ENSGALG00000032287 12734 0.855 - - - - 0.855 - - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 [Source:NCBI gene;Acc:396446]
86. NOB1 ENSGALG00000000693 15442 0.854 - - - - - - 0.854 - - - NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]
87. MRPL23 ENSGALG00000006561 13737 0.854 - - - - 0.854 - - - - - mitochondrial ribosomal protein L23 [Source:NCBI gene;Acc:374255]
88. POLB ENSGALG00000040828 7462 0.854 - - - - - - 0.854 - - - DNA polymerase beta [Source:HGNC Symbol;Acc:HGNC:9174]
89. LOC424109 ENSGALG00000008738 3932 0.854 - - - - - - 0.854 - - - alpha-aspartyl dipeptidase
90. RANGAP1 ENSGALG00000011966 20170 0.853 - - - - 0.853 - - - - - Ran GTPase activating protein 1 [Source:NCBI gene;Acc:417997]
91. MRPS25 ENSGALG00000008506 12131 0.852 - - - - 0.852 - - - - - mitochondrial ribosomal protein S25 [Source:NCBI gene;Acc:416129]
92. GALNTL4 GALNTL4 3548 0.852 - - - - - - 0.852 - - -
93. CBWD1 ENSGALG00000010147 2765 0.851 - - - - 0.851 - - - - - COBW domain containing 1 [Source:NCBI gene;Acc:427347]
94. ADD3 ENSGALG00000008542 13814 0.85 - - - - 0.850 - - - - - adducin 3 (gamma) [Source:NCBI gene;Acc:373892]
95. MKI67 ENSGALG00000025996 28136 0.85 - - - - 0.850 - - - - - marker of proliferation Ki-67, transcript variant X3
96. POLR2C ENSGALG00000001168 10703 0.849 - - - - - - 0.849 - - - RNA polymerase II subunit C [Source:NCBI gene;Acc:415635]
97. KPNA3 ENSGALG00000017009 17330 0.849 - - - - 0.849 - - - - - karyopherin subunit alpha 3 [Source:NCBI gene;Acc:418870]
98. APITD1 APITD1 11830 0.848 - - - - - - 0.848 - - -
99. FH ENSGALG00000013165 13669 0.848 - - - - 0.848 - - - - - fumarate hydratase [Source:NCBI gene;Acc:420969]
100. MED1 ENSGALG00000001708 9556 0.848 - - - - - - 0.848 - - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]

There are 160 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA