Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBE2L3

Gene Name Gene ID Reads Annotation
UBE2L3 ENSGALG00000036739 21401 ubiquitin conjugating enzyme E2 L3 [Source:NCBI gene;Acc:416769]











Genes with expression patterns similar to UBE2L3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBE2L3 ENSGALG00000036739 21401 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin conjugating enzyme E2 L3 [Source:NCBI gene;Acc:416769]
2. EIF1B ENSGALG00000038646 9508 1.745 - - - - - - 0.989 0.756 - - eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:HGNC:30792]
3. TIMM10 ENSGALG00000004845 31395 1.61 - - 0.785 - - - - 0.825 - - translocase of inner mitochondrial membrane 10 [Source:NCBI gene;Acc:425202]
4. PTDSS1 ENSGALG00000030185 5515 1.498 - - 0.737 - - - - 0.761 - - phosphatidylserine synthase 1 [Source:NCBI gene;Acc:428374]
5. IFT20 ENSGALG00000005707 23973 0.994 - - - - - - 0.994 - - - intraflagellar transport 20 [Source:HGNC Symbol;Acc:HGNC:30989]
6. RAP1B ENSGALG00000009927 26562 0.993 - - - - - - 0.993 - - - RAP1B, member of RAS oncogene family [Source:NCBI gene;Acc:417840]
7. DAPK3 ENSGALG00000037733 6215 0.992 - - - - - - 0.992 - - - death-associated protein kinase 3, transcript variant X2
8. LRPPRC ENSGALG00000009967 17091 0.992 - - - - - - 0.992 - - - leucine rich pentatricopeptide repeat containing [Source:HGNC Symbol;Acc:HGNC:15714]
9. SLC9A3R1 ENSGALG00000007650 13053 0.992 - - - - - - 0.992 - - - SLC9A3 regulator 1 [Source:NCBI gene;Acc:422108]
10. DHFR ENSGALG00000026757 18478 0.992 - - - - - - 0.992 - - - dihydrofolate reductase [Source:NCBI gene;Acc:427317]
11. CNOT6 ENSGALG00000034316 10496 0.991 - - - - - - 0.991 - - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
12. MATR3 ENSGALG00000002478 12793 0.99 - - - - - - 0.990 - - - matrin 3 [Source:NCBI gene;Acc:373948]
13. MCM3 ENSGALG00000016676 16934 0.99 - - - - - - 0.990 - - - minichromosome maintenance complex component 3 [Source:NCBI gene;Acc:422043]
14. ARHGAP32 ENSGALG00000043511 7916 0.99 - - - - - - 0.990 - - - Rho GTPase activating protein 32 [Source:HGNC Symbol;Acc:HGNC:17399]
15. CCNYL1 ENSGALG00000008485 11958 0.99 - - - - - - 0.990 - - - cyclin Y like 1
16. TMEM18 ENSGALG00000028744 11779 0.99 - - - - - - 0.990 - - - transmembrane protein 18 [Source:NCBI gene;Acc:421911]
17. C9orf64 ENSGALG00000012589 6097 0.989 - - - - - - 0.989 - - - chromosome 9 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:28144]
18. RAB12 ENSGALG00000033608 14160 0.989 - - - - - - 0.989 - - - RAB12, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:31332]
19. DNAJC7 ENSGALG00000042796 14597 0.989 - - - - - - 0.989 - - - DnaJ heat shock protein family (Hsp40) member C7 [Source:NCBI gene;Acc:428312]
20. HDAC8 ENSGALG00000004825 12066 0.989 - - - - - - 0.989 - - - histone deacetylase 8, transcript variant X2
21. GPC1 ENSGALG00000040316 13364 0.989 - - - - - - 0.989 - - - glypican 1 [Source:NCBI gene;Acc:424770]
22. WDHD1 ENSGALG00000012199 3570 0.988 - - - - - - 0.988 - - - WD repeat and HMG-box DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23170]
23. CTBPL ENSGALG00000007642 14238 0.988 - - - - - - 0.988 - - - C-terminal binding protein-like [Source:NCBI gene;Acc:416354]
24. FAM192A ENSGALG00000021473 10213 0.988 - - - - - - 0.988 - - - family with sequence similarity 192 member A [Source:NCBI gene;Acc:415647]
25. Sep-06 Sep-06 5961 0.987 - - - - - - 0.987 - - -
26. FAT1 ENSGALG00000013579 6030 0.987 - - - - - - 0.987 - - - FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]
27. USPL1 ENSGALG00000017079 6263 0.987 - - - - - - 0.987 - - - ubiquitin specific peptidase like 1 [Source:NCBI gene;Acc:395436]
28. CORO1C ENSGALG00000004901 7055 0.986 - - - - - - 0.986 - - - coronin 1C [Source:NCBI gene;Acc:416893]
29. CXCL12 ENSGALG00000041346 4128 0.986 - - - - - - 0.986 - - - C-X-C motif chemokine ligand 12 [Source:NCBI gene;Acc:395180]
30. EIF3D ENSGALG00000012529 40887 0.985 - - - - - - 0.985 - - - eukaryotic translation initiation factor 3 subunit D [Source:HGNC Symbol;Acc:HGNC:3278]
31. ZEB1 ENSGALG00000007260 9277 0.985 - - - - - - 0.985 - - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
32. LRPAP1 ENSGALG00000015612 3526 0.984 - - - - - - 0.984 - - - LDL receptor related protein associated protein 1 [Source:NCBI gene;Acc:395936]
33. MCM6 ENSGALG00000012348 12523 0.984 - - - - - - 0.984 - - - minichromosome maintenance complex component 6 [Source:NCBI gene;Acc:424295]
34. VSX1 ENSGALG00000037576 1517 0.984 - - - - - - 0.984 - - - visual system homeobox 1 [Source:NCBI gene;Acc:395537]
35. EFTUD2 ENSGALG00000000988 17913 0.983 - - - - - - 0.983 - - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
36. SMARCE1 ENSGALG00000003882 49063 0.983 - - - - - - 0.983 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
37. RNF141 ENSGALG00000029586 4962 0.983 - - - - - - 0.983 - - - ring finger protein 141 [Source:NCBI gene;Acc:423039]
38. CDCA4 ENSGALG00000011692 10381 0.982 - - - - - - 0.982 - - - cell division cycle associated 4 [Source:NCBI gene;Acc:423500]
39. C15H12ORF49 C15H12ORF49 13250 0.982 - - - - - - 0.982 - - -
40. ZNF644 ENSGALG00000034253 28348 0.98 - - - - - - 0.980 - - - zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]
41. PPIG ENSGALG00000009839 24114 0.977 - - - - - - 0.977 - - - peptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]
42. HNRNPH3 ENSGALG00000003947 28724 0.976 - - - - - - 0.976 - - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
43. INTS4 ENSGALG00000000091 5965 0.975 - - - - - - 0.975 - - - integrator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:25048]
44. PDLIM4 ENSGALG00000039872 7823 0.97 - - - - - - 0.970 - - - PDZ and LIM domain 4 [Source:NCBI gene;Acc:395643]
45. HNRNPM ENSGALG00000000377 40684 0.969 - - - - - - 0.969 - - - heterogeneous nuclear ribonucleoprotein M [Source:NCBI gene;Acc:420054]
46. LUM ENSGALG00000011271 44020 0.846 - - - - - - 0.846 - - - lumican [Source:NCBI gene;Acc:417891]
47. SECISBP2 ENSGALG00000010694 6990 0.846 - - 0.846 - - - - - - - SECIS binding protein 2 [Source:HGNC Symbol;Acc:HGNC:30972]
48. RPL3 ENSGALG00000012172 118287 0.845 - - - - - - 0.845 - - - ribosomal protein L3 [Source:NCBI gene;Acc:418016]
49. TMEM9B ENSGALG00000005908 14074 0.841 - - - - - - - 0.841 - - TMEM9 domain family member B [Source:HGNC Symbol;Acc:HGNC:1168]
50. INPP5F ENSGALG00000009445 1911 0.836 - - 0.836 - - - - - - - inositol polyphosphate-5-phosphatase F [Source:HGNC Symbol;Acc:HGNC:17054]
51. SUB1 ENSGALG00000003248 56412 0.833 - - - - - - 0.833 - - - SUB1 homolog, transcriptional regulator [Source:NCBI gene;Acc:427425]
52. GPBP1L1 ENSGALG00000010276 10253 0.833 - - 0.833 - - - - - - - GC-rich promoter binding protein 1 like 1 [Source:NCBI gene;Acc:424603]
53. ACTL6A ENSGALG00000009061 13013 0.828 - - 0.828 - - - - - - - actin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]
54. DLX5 ENSGALG00000009129 1395 0.824 - - 0.824 - - - - - - - distal-less homeobox 5 [Source:NCBI gene;Acc:373969]
55. MAST4 ENSGALG00000014784 4153 0.822 - - 0.822 - - - - - - - microtubule associated serine/threonine kinase family member 4 [Source:HGNC Symbol;Acc:HGNC:19037]
56. ANGPTL2 ENSGALG00000000927 2580 0.82 - - - - - - - 0.820 - - angiopoietin-like 2 [Source:NCBI gene;Acc:776031]
57. RILPL2 ENSGALG00000003321 5632 0.819 - - - - - - - 0.819 - - Rab interacting lysosomal protein like 2 [Source:HGNC Symbol;Acc:HGNC:28787]
58. TPMT ENSGALG00000012687 9537 0.816 - - - - - - - 0.816 - - thiopurine S-methyltransferase [Source:HGNC Symbol;Acc:HGNC:12014]
59. LMO4 ENSGALG00000006252 3686 0.815 - - 0.815 - - - - - - - LIM domain only 4 [Source:NCBI gene;Acc:373901]
60. VMA21 ENSGALG00000009065 6432 0.813 - - - - - - - 0.813 - - VMA21, vacuolar ATPase assembly factor [Source:NCBI gene;Acc:422385]
61. EIF4E2 ENSGALG00000007919 8163 0.811 - - - - - - - 0.811 - - eukaryotic translation initiation factor 4E family member 2 [Source:HGNC Symbol;Acc:HGNC:3293]
62. BOD1L1 ENSGALG00000026470 9250 0.808 - - - - - - - 0.808 - - biorientation of chromosomes in cell division 1 like 1 [Source:HGNC Symbol;Acc:HGNC:31792]
63. MAK16 ENSGALG00000001663 7455 0.807 - - 0.807 - - - - - - - MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]
64. ITPR1 ENSGALG00000008294 1226 0.807 - - 0.807 - - - - - - - inositol 1,4,5-trisphosphate receptor type 1 [Source:NCBI gene;Acc:395412]
65. MCM2 ENSGALG00000006037 13458 0.807 - - - - - - - 0.807 - - minichromosome maintenance complex component 2 [Source:NCBI gene;Acc:416027]
66. DGCR2 ENSGALG00000005891 8405 0.805 - - - - - - - 0.805 - - DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:HGNC:2845]
67. NCAPD2 ENSGALG00000039448 8658 0.805 - - - - - - - 0.805 - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
68. ARF6 ENSGALG00000026944 22014 0.805 - - - - - - - 0.805 - - ADP ribosylation factor 6 [Source:NCBI gene;Acc:428927]
69. HNRNPAB ENSGALG00000014381 41009 0.804 - - - - - - - 0.804 - - heterogeneous nuclear ribonucleoprotein A/B [Source:NCBI gene;Acc:396268]
70. SETD3 ENSGALG00000034802 4125 0.802 - - 0.802 - - - - - - - SET domain containing 3 [Source:NCBI gene;Acc:423445]
71. CDV3 ENSGALG00000032316 693 0.8 - - 0.800 - - - - - - - CDV3 homolog [Source:NCBI gene;Acc:420693]
72. FAM134A 1600 0.799 - - 0.799 - - - - - - - family with sequence similarity 134 member A
73. CYFIP1 ENSGALG00000016736 6701 0.799 - - - - - - - 0.799 - - cytoplasmic FMR1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:13759]
74. URI1 ENSGALG00000004506 6024 0.798 - - - - - - - 0.798 - - URI1, prefoldin like chaperone [Source:HGNC Symbol;Acc:HGNC:13236]
75. IMPA1 ENSGALG00000034487 3691 0.796 - - - - - - - 0.796 - - inositol monophosphatase 1 [Source:HGNC Symbol;Acc:HGNC:6050]
76. PPP1R7 ENSGALG00000031766 22187 0.795 - - - - - - - 0.795 - - protein phosphatase 1 regulatory subunit 7 [Source:NCBI gene;Acc:424844]
77. TXNDC12 ENSGALG00000010569 13822 0.794 - - 0.794 - - - - - - - thioredoxin domain containing 12 [Source:NCBI gene;Acc:772208]
78. SSU72 ENSGALG00000001489 7589 0.793 - - - - - - - 0.793 - - SSU72 homolog, RNA polymerase II CTD phosphatase [Source:NCBI gene;Acc:419410]
79. HADHA ENSGALG00000016536 3791 0.793 - - - - - - - 0.793 - - hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha [Source:NCBI gene;Acc:395929]
80. FBF1 ENSGALG00000002179 1738 0.792 - - 0.792 - - - - - - - Fas binding factor 1 [Source:NCBI gene;Acc:770159]
81. TSG101 ENSGALG00000006312 8289 0.791 - - - - - - - 0.791 - - tumor susceptibility gene 101 [Source:NCBI gene;Acc:423082]
82. ENSGALG00000028359 ENSGALG00000028359 479 0.791 - - 0.791 - - - - - - -
83. CROT ENSGALG00000008813 8052 0.791 - - 0.791 - - - - - - - carnitine O-octanoyltransferase [Source:HGNC Symbol;Acc:HGNC:2366]
84. FBXO34 ENSGALG00000032563 656 0.791 - - 0.791 - - - - - - - F-box protein 34 [Source:NCBI gene;Acc:423554]
85. NAA16 ENSGALG00000032808 3366 0.791 - - 0.791 - - - - - - - N(alpha)-acetyltransferase 16, NatA auxiliary subunit [Source:HGNC Symbol;Acc:HGNC:26164]
86. ING4 ENSGALG00000014457 5561 0.791 - - - - - - - 0.791 - - inhibitor of growth family member 4 [Source:NCBI gene;Acc:418281]
87. RWDD3 ENSGALG00000038421 10909 0.79 - - - - - - - 0.790 - - RWD domain containing 3 [Source:NCBI gene;Acc:424481]
88. RHOT1 ENSGALG00000003397 5149 0.789 - - 0.789 - - - - - - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
89. SLC4A1AP ENSGALG00000010047 3171 0.789 - - - - - - - 0.789 - - solute carrier family 4 member 1 adaptor protein [Source:HGNC Symbol;Acc:HGNC:13813]
90. PSTK 2511 0.789 - - - - - - - 0.789 - - phosphoseryl-tRNA kinase, transcript variant X1
91. CDC42SE2 ENSGALG00000027258 4725 0.788 - - - - - - - 0.788 - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
92. CASP1 ENSGALG00000001049 1067 0.786 - - 0.786 - - - - - - - caspase 1, transcript variant X2
93. NME3 ENSGALG00000027635 5974 0.786 - - - - - - - 0.786 - - NME/NM23 nucleoside diphosphate kinase 3 [Source:NCBI gene;Acc:416399]
94. LGALS3 ENSGALG00000012173 3306 0.784 - - 0.784 - - - - - - - galectin 3 [Source:NCBI gene;Acc:373917]
95. OGFOD3 ENSGALG00000001618 2438 0.784 - - - - - - - 0.784 - - 2-oxoglutarate and iron dependent oxygenase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26174]
96. IP6K1 ENSGALG00000002510 827 0.784 - - 0.784 - - - - - - - inositol hexakisphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:18360]
97. SIK1 ENSGALG00000041988 2179 0.784 - - - - - - - 0.784 - - salt inducible kinase 1 [Source:NCBI gene;Acc:395417]
98. EVC ENSGALG00000015037 1963 0.784 - - - - - - - 0.784 - - EvC ciliary complex subunit 1 [Source:NCBI gene;Acc:422851]
99. MAP3K7 ENSGALG00000015596 15164 0.783 - - - - - - - 0.783 - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
100. OSGEPL1 ENSGALG00000037727 1879 0.783 - - 0.783 - - - - - - - O-sialoglycoprotein endopeptidase like 1 [Source:HGNC Symbol;Acc:HGNC:23075]

There are 233 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA