Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBE2F

Gene Name Gene ID Reads Annotation
UBE2F ENSGALG00000003812 13874 ubiquitin conjugating enzyme E2 F (putative) [Source:NCBI gene;Acc:424015]











Genes with expression patterns similar to UBE2F

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBE2F ENSGALG00000003812 13874 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin conjugating enzyme E2 F (putative) [Source:NCBI gene;Acc:424015]
2. AES ENSGALG00000029503 17676 1.807 - - - - - - 0.845 0.962 - - amino-terminal enhancer of split [Source:HGNC Symbol;Acc:HGNC:307]
3. PRCC ENSGALG00000040696 9346 1.696 - - - - - - 0.773 0.923 - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
4. ID1 ENSGALG00000034661 44524 1.676 - - - - - - 0.804 0.872 - - inhibitor of DNA binding 1, HLH protein [Source:NCBI gene;Acc:395282]
5. SHROOM2 ENSGALG00000030802 4517 1.665 - - - - - - 0.735 0.930 - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
6. DPYSL2 ENSGALG00000000227 9668 1.655 - - - - - - 0.739 0.916 - - dihydropyrimidinase like 2 [Source:NCBI gene;Acc:395155]
7. ACO2 ENSGALG00000011950 30387 1.653 - - - - - - 0.734 0.919 - - aconitase 2 [Source:NCBI gene;Acc:374009]
8. BRMS1L ENSGALG00000010093 4964 1.643 - - - - - - 0.702 0.941 - - BRMS1 like transcriptional repressor [Source:NCBI gene;Acc:423328]
9. UPF3B ENSGALG00000008618 12350 1.641 - - - - - - 0.717 0.924 - - UPF3B, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:20439]
10. PPP1CC ENSGALG00000004571 14748 1.595 - - - - - - 0.710 0.885 - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
11. MRPL14 ENSGALG00000010285 11820 1.58 - - - - - - 0.707 0.873 - - mitochondrial ribosomal protein L14 [Source:HGNC Symbol;Acc:HGNC:14279]
12. RSL1D1 ENSGALG00000033690 13638 1.528 - - - - - - 0.716 0.812 - - ribosomal L1 domain containing 1 [Source:NCBI gene;Acc:416416]
13. RCHY1 ENSGALG00000023335 12947 1.518 - - - - - - 0.782 0.736 - - ring finger and CHY zinc finger domain containing 1 [Source:NCBI gene;Acc:771726]
14. GMNN ENSGALG00000013626 15838 1.497 - - - - - - 0.726 0.771 - - geminin, DNA replication inhibitor [Source:NCBI gene;Acc:421004]
15. GTPBP4 ENSGALG00000006703 16183 1.489 - - 0.757 - - - 0.732 - - - GTP binding protein 4 [Source:NCBI gene;Acc:420458]
16. FAM122A ENSGALG00000006127 9630 0.978 - - - - - - - 0.978 - - family with sequence similarity 122A [Source:NCBI gene;Acc:422237]
17. IDI1 ENSGALG00000006723 7761 0.976 - - - - - - - 0.976 - - isopentenyl-diphosphate delta isomerase 1, transcript variant X1
18. RFC4 ENSGALG00000008703 5842 0.972 - - - - - - - 0.972 - - replication factor C subunit 4 [Source:NCBI gene;Acc:424958]
19. MAP2 ENSGALG00000002789 6597 0.97 - - - - - - - 0.970 - - microtubule associated protein 2, transcript variant X33
20. KIF2C ENSGALG00000010120 8999 0.949 - - - - - - - 0.949 - - kinesin family member 2C, transcript variant X1
21. COPS3 ENSGALG00000004834 16012 0.947 - - - - - - - 0.947 - - COP9 signalosome subunit 3 [Source:NCBI gene;Acc:416504]
22. CYB5B ENSGALG00000000660 9733 0.946 - - - - - - - 0.946 - - cytochrome b5 type B [Source:NCBI gene;Acc:415865]
23. ENSGALG00000002595 ENSGALG00000002595 32163 0.943 - - - - - - - 0.943 - -
24. PDIA5 ENSGALG00000011689 6913 0.943 - - - - - - - 0.943 - - protein disulfide isomerase family A member 5 [Source:HGNC Symbol;Acc:HGNC:24811]
25. CAT ENSGALG00000030187 7534 0.94 - - - - - - - 0.940 - - catalase [Source:NCBI gene;Acc:423600]
26. FAM136A ENSGALG00000042163 39487 0.939 - - - - - - - 0.939 - - family with sequence similarity 136 member A [Source:NCBI gene;Acc:426296]
27. ARID4A ENSGALG00000012037 8554 0.939 - - - - - - - 0.939 - - AT-rich interaction domain 4A [Source:NCBI gene;Acc:423541]
28. SLC25A14 ENSGALG00000004063 5574 0.939 - - - - - - - 0.939 - - solute carrier family 25 member 14 [Source:NCBI gene;Acc:422141]
29. CAPZA1 ENSGALG00000001547 24242 0.937 - - - - - - - 0.937 - - capping actin protein of muscle Z-line alpha subunit 1 [Source:NCBI gene;Acc:396521]
30. ARFGAP3 ENSGALG00000014140 4612 0.936 - - - - - - - 0.936 - - ADP ribosylation factor GTPase activating protein 3 [Source:NCBI gene;Acc:418224]
31. NOVA1 ENSGALG00000009850 7584 0.936 - - - - - - - 0.936 - - uncharacterized LOC423300 [Source:NCBI gene;Acc:423300]
32. ISCA1 ENSGALG00000012606 10342 0.936 - - - - - - - 0.936 - - iron-sulfur cluster assembly 1 [Source:NCBI gene;Acc:427463]
33. GNG10 ENSGALG00000015683 6905 0.935 - - - - - - - 0.935 - - G protein subunit gamma 10 [Source:NCBI gene;Acc:769603]
34. LGMN ENSGALG00000010811 7401 0.935 - - - - - - - 0.935 - - legumain [Source:HGNC Symbol;Acc:HGNC:9472]
35. MFF ENSGALG00000003079 5289 0.935 - - - - - - - 0.935 - - mitochondrial fission factor [Source:HGNC Symbol;Acc:HGNC:24858]
36. OTUD4 ENSGALG00000009968 3919 0.933 - - - - - - - 0.933 - - OTU deubiquitinase 4 [Source:HGNC Symbol;Acc:HGNC:24949]
37. MRPS31 ENSGALG00000017033 9287 0.933 - - - - - - - 0.933 - - mitochondrial ribosomal protein S31 [Source:HGNC Symbol;Acc:HGNC:16632]
38. CEP192 ENSGALG00000035625 2270 0.933 - - - - - - - 0.933 - - centrosomal protein 192 [Source:HGNC Symbol;Acc:HGNC:25515]
39. LYRM4 ENSGALG00000027339 2917 0.932 - - - - - - - 0.932 - - LYR motif containing 4 [Source:NCBI gene;Acc:420874]
40. MRPS7 ENSGALG00000007999 5445 0.932 - - - - - - - 0.932 - - mitochondrial ribosomal protein S7 [Source:NCBI gene;Acc:422122]
41. TNFRSF11B ENSGALG00000043167 911 0.932 - - - - - - - 0.932 - - TNF receptor superfamily member 11b [Source:NCBI gene;Acc:378803]
42. SGCE ENSGALG00000009670 3070 0.931 - - - - - - - 0.931 - - sarcoglycan epsilon [Source:HGNC Symbol;Acc:HGNC:10808]
43. KCNK5 ENSGALG00000034077 3233 0.931 - - - - - - - 0.931 - - potassium two pore domain channel subfamily K member 5 [Source:HGNC Symbol;Acc:HGNC:6280]
44. TRIM9 ENSGALG00000012367 1267 0.931 - - - - - - - 0.931 - - tripartite motif containing 9 [Source:HGNC Symbol;Acc:HGNC:16288]
45. GOT2 ENSGALG00000002321 4961 0.931 - - - - - - - 0.931 - - glutamic-oxaloacetic transaminase 2 [Source:NCBI gene;Acc:396533]
46. L3HYPDH ENSGALG00000012011 2212 0.931 - - - - - - - 0.931 - - trans-L-3-hydroxyproline dehydratase [Source:HGNC Symbol;Acc:HGNC:20488]
47. WDR91 ENSGALG00000011724 5787 0.931 - - - - - - - 0.931 - - WD repeat domain 91 [Source:NCBI gene;Acc:417939]
48. KPNA1 ENSGALG00000014426 2724 0.93 - - - - - - - 0.930 - - karyopherin subunit alpha 1 [Source:NCBI gene;Acc:418271]
49. PM20D1 ENSGALG00000000724 2108 0.93 - - - - - - - 0.930 - - peptidase M20 domain containing 1 [Source:NCBI gene;Acc:419838]
50. CCDC167 ENSGALG00000010151 3567 0.93 - - - - - - - 0.930 - - coiled-coil domain containing 167 [Source:NCBI gene;Acc:421433]
51. SERPINH1 ENSGALG00000011214 15311 0.93 - - - - - - - 0.930 - - serpin family H member 1 [Source:NCBI gene;Acc:396228]
52. TCTEX1D2 ENSGALG00000027722 2201 0.929 - - - - - - - 0.929 - - Tctex1 domain containing 2
53. EPM2A ENSGALG00000012275 872 0.929 - - - - - - - 0.929 - - EPM2A, laforin glucan phosphatase [Source:NCBI gene;Acc:421611]
54. TLE3 ENSGALG00000008120 2655 0.929 - - - - - - - 0.929 - - transducin like enhancer of split 3, transcript variant X10
55. RAB24 ENSGALG00000002984 6264 0.929 - - - - - - - 0.929 - - RAB24, member RAS oncogene family [Source:NCBI gene;Acc:427627]
56. ELMO2 ENSGALG00000007246 4569 0.929 - - - - - - - 0.929 - - engulfment and cell motility 2 [Source:HGNC Symbol;Acc:HGNC:17233]
57. POLR3H ENSGALG00000011947 2899 0.929 - - - - - - - 0.929 - - RNA polymerase III subunit H [Source:NCBI gene;Acc:417990]
58. PRKAR2A ENSGALG00000007023 909 0.929 - - - - - - - 0.929 - - protein kinase cAMP-dependent type II regulatory subunit alpha [Source:HGNC Symbol;Acc:HGNC:9391]
59. C26H6ORF106 C26H6ORF106 2168 0.929 - - - - - - - 0.929 - -
60. COL14A1 ENSGALG00000037675 2652 0.928 - - - - - - - 0.928 - - collagen type XIV alpha 1 chain [Source:NCBI gene;Acc:396276]
61. CLIP1 ENSGALG00000004467 1058 0.928 - - - - - - - 0.928 - - CAP-Gly domain containing linker protein 1 [Source:NCBI gene;Acc:395784]
62. TNPO3 ENSGALG00000039420 5178 0.928 - - - - - - - 0.928 - - transportin 3 [Source:HGNC Symbol;Acc:HGNC:17103]
63. HHIP ENSGALG00000009948 1536 0.928 - - - - - - - 0.928 - - hedgehog interacting protein [Source:HGNC Symbol;Acc:HGNC:14866]
64. EEFSEC ENSGALG00000038684 298 0.927 - - - - - - - 0.927 - - eukaryotic elongation factor, selenocysteine-tRNA specific [Source:HGNC Symbol;Acc:HGNC:24614]
65. B9D1 ENSGALG00000005096 760 0.927 - - - - - - - 0.927 - - B9 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24123]
66. ANGIOPOIETIN-2 ANGIOPOIETIN-2 920 0.926 - - - - - - - 0.926 - -
67. RPB6 RPB6 9517 0.926 - - - - - - - 0.926 - -
68. NMD3 ENSGALG00000009533 8726 0.924 - - - - - - - 0.924 - - NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]
69. BMP5 ENSGALG00000016293 2119 0.923 - - - - - - - 0.923 - - bone morphogenetic protein 5 [Source:NCBI gene;Acc:396053]
70. TRMT10A ENSGALG00000012264 2467 0.918 - - - - - - - 0.918 - - tRNA methyltransferase 10A [Source:HGNC Symbol;Acc:HGNC:28403]
71. CNOT6 ENSGALG00000034316 10496 0.918 - - - - - - - 0.918 - - CCR4-NOT transcription complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14099]
72. ATPAF1 ENSGALG00000010444 3677 0.917 - - - - - - - 0.917 - - ATP synthase mitochondrial F1 complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18803]
73. CNDP2 ENSGALG00000019514 19531 0.915 - - - - - - - 0.915 - - carnosine dipeptidase 2 [Source:NCBI gene;Acc:421013]
74. PTP4A1 ENSGALG00000016271 23953 0.91 - - - - - - - 0.910 - - protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
75. NAT10 ENSGALG00000014573 12754 0.89 - - - - - - - 0.890 - - N-acetyltransferase 10 [Source:NCBI gene;Acc:426609]
76. GSTO1 ENSGALG00000008409 7561 0.887 - - - - - - - 0.887 - - glutathione S-transferase omega 1 [Source:NCBI gene;Acc:423881]
77. NXN 20202 0.88 - - - - - - 0.880 - - - nucleoredoxin, transcript variant X1
78. BDH1_1 ENSGALG00000023601 6109 0.879 - - - - - - - 0.879 - - 3-hydroxybutyrate dehydrogenase, type 1
79. N6AMT2 N6AMT2 4703 0.873 - - - - - - - 0.873 - -
80. MRPL38 ENSGALG00000002194 6648 0.87 - - - - - - - 0.870 - - mitochondrial ribosomal protein L38 [Source:NCBI gene;Acc:770172]
81. DGKZ ENSGALG00000008380 5389 0.866 - - - - - - - 0.866 - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
82. PHLDA2 ENSGALG00000032687 7733 0.862 - - - - - - - 0.862 - - pleckstrin homology like domain family A member 2 [Source:NCBI gene;Acc:423088]
83. ATG12 ENSGALG00000002345 3607 0.861 - - - - - - - 0.861 - - autophagy related 12 [Source:HGNC Symbol;Acc:HGNC:588]
84. CAP1 ENSGALG00000036294 18598 0.859 - - - - - - 0.859 - - - cyclase associated actin cytoskeleton regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:20040]
85. PAX1 ENSGALG00000039040 3339 0.852 - - - - - - - 0.852 - - paired box 1 [Source:HGNC Symbol;Acc:HGNC:8615]
86. CSNK1G1 ENSGALG00000030812 31618 0.851 - - - - - - - 0.851 - - casein kinase 1 gamma 1 [Source:NCBI gene;Acc:415328]
87. RRP9 ENSGALG00000043359 9747 0.851 - - - - - - 0.851 - - - ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]
88. GNL3 ENSGALG00000001613 10911 0.849 - - - - - - 0.849 - - - G protein nucleolar 3 [Source:HGNC Symbol;Acc:HGNC:29931]
89. EIF4E2 ENSGALG00000007919 8163 0.845 - - - - - - 0.845 - - - eukaryotic translation initiation factor 4E family member 2 [Source:HGNC Symbol;Acc:HGNC:3293]
90. EIF2B EIF2B 28702 0.842 - - - - - - 0.842 - - -
91. GSPT1 15580 0.841 - - - - - - 0.841 - - - G1 to S phase transition 1, transcript variant X1
92. MCTS1 ENSGALG00000008517 27514 0.84 - - - - - - 0.840 - - - MCTS1, re-initiation and release factor [Source:NCBI gene;Acc:422363]
93. WDR61 ENSGALG00000003221 11352 0.84 - - - - - - 0.840 - - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
94. DDX19B ENSGALG00000039967 49600 0.839 - - - - - - 0.839 - - - ATP-dependent RNA helicase DDX19B [Source:NCBI gene;Acc:426504]
95. ARPC1A ENSGALG00000004693 11583 0.839 - - - - - - 0.839 - - - actin related protein 2/3 complex subunit 1A [Source:NCBI gene;Acc:770269]
96. TOMM20 ENSGALG00000035299 23431 0.836 - - - - - - 0.836 - - - translocase of outer mitochondrial membrane 20 [Source:HGNC Symbol;Acc:HGNC:20947]
97. PARG ENSGALG00000002117 8702 0.836 - - - - - - 0.836 - - - poly(ADP-ribose) glycohydrolase [Source:HGNC Symbol;Acc:HGNC:8605]
98. MOSPD1 ENSGALG00000006132 8503 0.834 - - - - - - 0.834 - - - motile sperm domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25235]
99. UQCRC1 ENSGALG00000005789 23201 0.832 - - - - - - 0.832 - - - ubiquinol-cytochrome c reductase core protein 1 [Source:HGNC Symbol;Acc:HGNC:12585]
100. SMU1 ENSGALG00000002014 8136 0.831 - - - - - - 0.831 - - - SMU1, DNA replication regulator and spliceosomal factor [Source:NCBI gene;Acc:427377]

There are 338 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA