Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBE2E1

Gene Name Gene ID Reads Annotation
UBE2E1 ENSGALG00000011286 5483 ubiquitin conjugating enzyme E2 E1 [Source:HGNC Symbol;Acc:HGNC:12477]











Genes with expression patterns similar to UBE2E1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBE2E1 ENSGALG00000011286 5483 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin conjugating enzyme E2 E1 [Source:HGNC Symbol;Acc:HGNC:12477]
2. ETAA1 ENSGALG00000027922 1684 1.619 - - - - - 0.855 0.764 - - - ETAA1, ATR kinase activator [Source:HGNC Symbol;Acc:HGNC:24648]
3. RPE ENSGALG00000002847 7644 1.59 - - - - - - 0.844 0.746 - - ribulose-5-phosphate-3-epimerase, transcript variant X2
4. MTDH ENSGALG00000034050 9525 1.568 - - - - - - 0.817 0.751 - - metadherin [Source:HGNC Symbol;Acc:HGNC:29608]
5. ASB6 ENSGALG00000004378 1080 1.52 - - - - - - 0.790 0.730 - - ankyrin repeat and SOCS box containing 6 [Source:NCBI gene;Acc:417194]
6. TAF8 ENSGALG00000003498 2071 1.506 - - - - - - 0.746 0.760 - - TATA-box binding protein associated factor 8 [Source:NCBI gene;Acc:419929]
7. SMG1 ENSGALG00000006829 1875 1.475 - - - - - - 0.724 0.751 - - SMG1, nonsense mediated mRNA decay associated PI3K related kinase [Source:HGNC Symbol;Acc:HGNC:30045]
8. WDSUB1 ENSGALG00000012574 2038 1.474 - - - - - - 0.731 0.743 - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:NCBI gene;Acc:424331]
9. PIF1 ENSGALG00000009032 2342 1.473 - - - - - - 0.761 0.712 - - PIF1 5'-to-3' DNA helicase [Source:HGNC Symbol;Acc:HGNC:26220]
10. PSMA2 ENSGALG00000039387 23620 1.467 - - 0.706 - - - 0.761 - - - proteasome subunit alpha 2 [Source:NCBI gene;Acc:420772]
11. MPRIP ENSGALG00000004798 6700 1.459 - - - - - - 0.752 0.707 - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
12. HISTH1 ENSGALG00000011747 16825 1.405 - - - - - - 0.704 0.701 - - histone H1
13. C14orf159 C14orf159 7 0.914 - - - - - 0.914 - - - -
14. REM1 ENSGALG00000045602 4 0.903 - - - - - 0.903 - - - - RRAD and GEM like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:15922]
15. LCT ENSGALG00000012260 21 0.903 - - - - - 0.903 - - - - lactase [Source:NCBI gene;Acc:424294]
16. TRPV6 ENSGALG00000014746 3 0.903 - - - - - 0.903 - - - - transient receptor potential cation channel subfamily V member 6 [Source:HGNC Symbol;Acc:HGNC:14006]
17. C15orf60 C15orf60 16 0.903 - - - - - 0.903 - - - -
18. ASB15 ENSGALG00000008814 7 0.903 - - - - - 0.903 - - - - ankyrin repeat and SOCS box containing 15 [Source:HGNC Symbol;Acc:HGNC:19767]
19. HSD11B1b ENSGALG00000001369 1 0.903 - - - - - 0.903 - - - - hydroxysteroid (11-beta) dehydrogenase 1b
20. LOC396365 ENSGALG00000027219 7 0.903 - - - - - 0.903 - - - - preprogastrin
21. CPSF4L ENSGALG00000004441 4 0.903 - - - - - 0.903 - - - - cleavage and polyadenylation specific factor 4 like, transcript variant X2
22. SLC51A ENSGALG00000007478 6 0.903 - - - - - 0.903 - - - - solute carrier family 51 alpha subunit [Source:NCBI gene;Acc:424916]
23. ENSGALG00000008309 ENSGALG00000008309 7 0.903 - - - - - 0.903 - - - -
24. MRAP2 ENSGALG00000015838 7 0.903 - - - - - 0.903 - - - - Gallus gallus melanocortin 2 receptor accessory protein 2 (MRAP2), mRNA. [Source:RefSeq mRNA;Acc:NM_001320907]
25. CHRNB3 ENSGALG00000015384 9 0.903 - - - - - 0.903 - - - - cholinergic receptor nicotinic beta 3 subunit [Source:NCBI gene;Acc:395604]
26. TMEM56 ENSGALG00000005580 10 0.903 - - - - - 0.903 - - - - transmembrane protein 56 [Source:NCBI gene;Acc:424483]
27. ENSGALG00000016499 ENSGALG00000016499 4 0.903 - - - - - 0.903 - - - -
28. C1QTNF4 ENSGALG00000008080 3 0.903 - - - - - 0.903 - - - - C1q and TNF related 4 [Source:HGNC Symbol;Acc:HGNC:14346]
29. ENSGALG00000010218 ENSGALG00000010218 12 0.897 - - - - - 0.897 - - - -
30. IL1RAP ENSGALG00000007253 6 0.897 - - - - - 0.897 - - - - interleukin 1 receptor accessory protein [Source:HGNC Symbol;Acc:HGNC:5995]
31. TGIF2 ENSGALG00000024081 21 0.896 - - - - - 0.896 - - - - TGFB induced factor homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15764]
32. PPARG ENSGALG00000004974 62 0.895 - - - - - 0.895 - - - - peroxisome proliferator-activated receptor gamma [Source:NCBI gene;Acc:373928]
33. CD200R1A CD200R1A 105 0.894 - - - - - 0.894 - - - -
34. NIPAL3 ENSGALG00000004268 37 0.893 - - - - - 0.893 - - - - NIPA like domain containing 3 [Source:HGNC Symbol;Acc:HGNC:25233]
35. FIBCD1 ENSGALG00000003866 2 0.89 - - - - - 0.890 - - - - fibrinogen C domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25922]
36. LUZP2 ENSGALG00000030151 585 0.889 - - - - - 0.889 - - - - leucine zipper protein 2 [Source:NCBI gene;Acc:423001]
37. SGK196 SGK196 83 0.879 - - - - - 0.879 - - - -
38. IKBIP ENSGALG00000026284 31 0.875 - - - - - 0.875 - - - - IKBKB interacting protein [Source:HGNC Symbol;Acc:HGNC:26430]
39. C20orf96 C20orf96 10 0.875 - - - - - 0.875 - - - -
40. MAP3K8 ENSGALG00000007356 188 0.873 - - - - - 0.873 - - - - mitogen-activated protein kinase kinase kinase 8 [Source:HGNC Symbol;Acc:HGNC:6860]
41. ENSGALG00000027143 ENSGALG00000027143 23 0.872 - - - - - 0.872 - - - -
42. CCNJL ENSGALG00000040152 4 0.866 - - - - - 0.866 - - - - cyclin J like [Source:HGNC Symbol;Acc:HGNC:25876]
43. CASP7 ENSGALG00000008933 506 0.863 - - - - - 0.863 - - - - caspase 7 [Source:HGNC Symbol;Acc:HGNC:1508]
44. GHR ENSGALG00000014855 131 0.859 - - - - - 0.859 - - - - growth hormone receptor [Source:NCBI gene;Acc:408184]
45. FER ENSGALG00000000273 80 0.857 - - - - - 0.857 - - - - FER tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3655]
46. DPYSL3 ENSGALG00000007582 7743 0.854 - - - - - - 0.854 - - - dihydropyrimidinase like 3 [Source:NCBI gene;Acc:395154]
47. VPS29 ENSGALG00000004529 22509 0.853 - - - - - - 0.853 - - - VPS29, retromer complex component [Source:NCBI gene;Acc:416867]
48. SRD5A2 ENSGALG00000010625 23 0.852 - - - - - 0.852 - - - - steroid 5 alpha-reductase 2 [Source:HGNC Symbol;Acc:HGNC:11285]
49. ABHD17A ENSGALG00000041163 5578 0.852 - - - - - - 0.852 - - - abhydrolase domain containing 17A [Source:HGNC Symbol;Acc:HGNC:28756]
50. PCDH7 ENSGALG00000033883 6 0.848 - - - - - 0.848 - - - - protocadherin 7 [Source:HGNC Symbol;Acc:HGNC:8659]
51. S100A9 ENSGALG00000024272 103 0.848 - - - - - 0.848 - - - - S100 calcium binding protein A9 [Source:NCBI gene;Acc:426356]
52. CACNA2D3 ENSGALG00000005400 66 0.844 - - - - - 0.844 - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 3 [Source:HGNC Symbol;Acc:HGNC:15460]
53. EIF1AY ENSGALG00000016410 6431 0.843 - - - - - - 0.843 - - - eukaryotic translation initiation factor 1A, Y-linked [Source:NCBI gene;Acc:418606]
54. PARL ENSGALG00000002315 15943 0.842 - - - - - - 0.842 - - - presenilin associated rhomboid like
55. MRPL10 ENSGALG00000014387 12386 0.841 - - - - - - 0.841 - - - mitochondrial ribosomal protein L10 [Source:HGNC Symbol;Acc:HGNC:14055]
56. PARN ENSGALG00000003091 6363 0.839 - - - - - - 0.839 - - - poly(A)-specific ribonuclease [Source:NCBI gene;Acc:416423]
57. CDC42SE2 ENSGALG00000027258 4725 0.839 - - - - - - 0.839 - - - CDC42 small effector 2 [Source:NCBI gene;Acc:768825]
58. CCNK ENSGALG00000011138 6416 0.838 - - - - - - 0.838 - - - cyclin K [Source:NCBI gene;Acc:423446]
59. PLA2G10L ENSGALG00000019233 11 0.836 - - - - - 0.836 - - - - phospholipase A2 group X-like, transcript variant X2
60. URM1 ENSGALG00000004971 17880 0.835 - - - - - - 0.835 - - - ubiquitin related modifier 1 [Source:NCBI gene;Acc:417221]
61. RPS19BP1 ENSGALG00000029810 5768 0.832 - - - - - - 0.832 - - - ribosomal protein S19 binding protein 1 [Source:NCBI gene;Acc:418011]
62. CLDND1 ENSGALG00000039538 5048 0.832 - - - - - - 0.832 - - - claudin domain containing 1 [Source:NCBI gene;Acc:418357]
63. F8 ENSGALG00000005077 56 0.832 - - - - - 0.832 - - - - coagulation factor VIII [Source:HGNC Symbol;Acc:HGNC:3546]
64. NIPA2 ENSGALG00000016737 3792 0.831 - - - - - - 0.831 - - - NIPA magnesium transporter 2 [Source:NCBI gene;Acc:418680]
65. SUFU ENSGALG00000008096 307 0.83 - - - - - 0.830 - - - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
66. BDH2 ENSGALG00000012338 2446 0.828 - - - - - 0.828 - - - - 3-hydroxybutyrate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:32389]
67. CHIC2 ENSGALG00000013931 21 0.828 - - - - - 0.828 - - - - cysteine rich hydrophobic domain 2 [Source:HGNC Symbol;Acc:HGNC:1935]
68. C15orf26 C15orf26 21 0.827 - - - - - 0.827 - - - -
69. RUNX3 ENSGALG00000043372 43 0.827 - - - - - 0.827 - - - - runt related transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:10473]
70. ZYX ENSGALG00000014688 8686 0.827 - - - - - - 0.827 - - - zyxin [Source:NCBI gene;Acc:418300]
71. CCDC101 CCDC101 9111 0.826 - - - - - - 0.826 - - -
72. INTS6 ENSGALG00000017018 3083 0.826 - - - - - - 0.826 - - - integrator complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:14879]
73. TRMT12 ENSGALG00000006773 707 0.824 - - - - - 0.824 - - - - tRNA methyltransferase 12 homolog [Source:HGNC Symbol;Acc:HGNC:26091]
74. GNG13 ENSGALG00000005293, ENSGALG00000038594 73 0.824 - - - - - 0.824 - - - - G protein subunit gamma 13 [Source:NCBI gene;Acc:771014]
75. MED4 ENSGALG00000016995 3309 0.823 - - - - - - 0.823 - - - mediator complex subunit 4 [Source:HGNC Symbol;Acc:HGNC:17903]
76. PRPF40A ENSGALG00000012526 7724 0.823 - - - - - - 0.823 - - - pre-mRNA processing factor 40 homolog A [Source:HGNC Symbol;Acc:HGNC:16463]
77. CANX ENSGALG00000032148 11297 0.822 - - - - - - 0.822 - - - calnexin [Source:NCBI gene;Acc:416288]
78. FASTKD1 ENSGALG00000009841 45 0.821 - - - - - 0.821 - - - - FAST kinase domains 1 [Source:HGNC Symbol;Acc:HGNC:26150]
79. IK ENSGALG00000037172 12100 0.821 - - - - - - 0.821 - - - IK cytokine, down-regulator of HLA II [Source:NCBI gene;Acc:416133]
80. TOP3B ENSGALG00000030051 5953 0.821 - - - - - - 0.821 - - - DNA topoisomerase III beta [Source:NCBI gene;Acc:416771]
81. SHROOM2 ENSGALG00000030802 4517 0.819 - - - - - - 0.819 - - - shroom family member 2 [Source:HGNC Symbol;Acc:HGNC:630]
82. PAPD7 ENSGALG00000013061 2031 0.818 - - - - - - 0.818 - - - poly(A) RNA polymerase D7, non-canonical [Source:NCBI gene;Acc:770425]
83. BMI1 ENSGALG00000041267 6618 0.816 - - - - - - 0.816 - - - BMI1 proto-oncogene, polycomb ring finger [Source:NCBI gene;Acc:493647]
84. SPCS2 ENSGALG00000019036 9496 0.816 - - - - - - 0.816 - - - signal peptidase complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28962]
85. UBE2V2 ENSGALG00000028133 7044 0.816 - - - - - - 0.816 - - - ubiquitin conjugating enzyme E2 V2 [Source:NCBI gene;Acc:421109]
86. PSMD4 ENSGALG00000028505 16 0.816 - - - - - 0.816 - - - - proteasome 26S subunit, non-ATPase 4 [Source:NCBI gene;Acc:100216364]
87. FAM65C 36 0.814 - - - - - 0.814 - - - - family with sequence similarity 65 member C, transcript variant X29
88. SCARB1 ENSGALG00000046226 428 0.814 - - - - - 0.814 - - - - scavenger receptor class B member 1 [Source:HGNC Symbol;Acc:HGNC:1664]
89. PALD1 ENSGALG00000004465 3553 0.814 - - - - - - 0.814 - - - phosphatase domain containing, paladin 1 [Source:NCBI gene;Acc:373898]
90. RBM34 ENSGALG00000029915 5618 0.812 - - - - - - 0.812 - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
91. TDRD1 ENSGALG00000046180 612 0.811 - - - - - 0.811 - - - - tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712]
92. OCRL ENSGALG00000003920 1812 0.81 - - - - - - 0.810 - - - OCRL, inositol polyphosphate-5-phosphatase [Source:HGNC Symbol;Acc:HGNC:8108]
93. DAB2 ENSGALG00000003803 6143 0.809 - - - - - - 0.809 - - - DAB2, clathrin adaptor protein [Source:HGNC Symbol;Acc:HGNC:2662]
94. GINS1 ENSGALG00000008538 4786 0.808 - - - - - - - 0.808 - - GINS complex subunit 1 [Source:NCBI gene;Acc:425297]
95. KIAA2026 ENSGALG00000015050 4659 0.808 - - - - - - 0.808 - - - KIAA2026 [Source:HGNC Symbol;Acc:HGNC:23378]
96. TMEM135 2283 0.808 - - - - - - 0.808 - - - transmembrane protein 135, transcript variant X4
97. ENSGALG00000023084 ENSGALG00000023084 10 0.808 - - - - - 0.808 - - - -
98. HTATSF1 ENSGALG00000006410 3526 0.807 - - - - - - 0.807 - - - HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:HGNC:5276]
99. GGA.8379 GGA.8379 4419 0.807 - - - - - - 0.807 - - -
100. EIF2D ENSGALG00000000856 8348 0.806 - - - - - - 0.806 - - - eukaryotic translation initiation factor 2D [Source:NCBI gene;Acc:419845]

There are 373 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA