Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBE2D3

Gene Name Gene ID Reads Annotation
UBE2D3 ENSGALG00000012311 39831 ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]











Genes with expression patterns similar to UBE2D3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBE2D3 ENSGALG00000012311 39831 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
2. SEPHS1 ENSGALG00000014575 10701 2.627 - - - - 0.945 - 0.975 0.707 - - selenophosphate synthetase 1 [Source:NCBI gene;Acc:426612]
3. TMF1 ENSGALG00000013408 3344 1.891 - - - - 0.935 - 0.956 - - - TATA element modulatory factor 1 [Source:HGNC Symbol;Acc:HGNC:11870]
4. RALGDS ENSGALG00000003412 4478 1.891 - - - - 0.932 - 0.959 - - - ral guanine nucleotide dissociation stimulator, transcript variant X10
5. VPS13B 2293 1.747 - - - - - - 0.958 0.789 - - vacuolar protein sorting 13 homolog B
6. RBM6 ENSGALG00000035578 1690 1.73 - - - - 0.934 - - 0.796 - - RNA binding motif protein 6 [Source:NCBI gene;Acc:415931]
7. RHOT1 ENSGALG00000003397 5149 1.722 - - - - 0.929 - - 0.793 - - ras homolog family member T1 [Source:NCBI gene;Acc:417410]
8. LGALS1 ENSGALG00000012420 13993 1.713 - - - - 0.927 - - 0.786 - - galectin 1 [Source:NCBI gene;Acc:396491]
9. SMARCB1 ENSGALG00000005983 20548 1.694 - - - - 0.846 - 0.848 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [Source:NCBI gene;Acc:769489]
10. ENSGALG00000021397 ENSGALG00000021397 51155 0.988 - - - - - - 0.988 - - -
11. ARHGDIA ENSGALG00000008443 39103 0.984 - - - - - - 0.984 - - - Rho GDP dissociation inhibitor alpha [Source:NCBI gene;Acc:769231]
12. NDUFA4 ENSGALG00000025999 53323 0.982 - - - - - - 0.982 - - - NDUFA4, mitochondrial complex associated [Source:NCBI gene;Acc:772135]
13. SPPL2A ENSGALG00000031348 16700 0.978 - - - - - - 0.978 - - - signal peptide peptidase like 2A [Source:NCBI gene;Acc:415450]
14. CHTOP ENSGALG00000042129 24112 0.975 - - - - - - 0.975 - - - chromatin target of PRMT1 [Source:HGNC Symbol;Acc:HGNC:24511]
15. ANXA2 ENSGALG00000003770 18252 0.975 - - - - - - 0.975 - - - annexin A2 [Source:NCBI gene;Acc:396297]
16. AP1M1 ENSGALG00000003959 31761 0.974 - - - - - - 0.974 - - - adaptor related protein complex 1 subunit mu 1 [Source:NCBI gene;Acc:420149]
17. OGT ENSGALG00000005425 31074 0.973 - - - - - - 0.973 - - - O-linked N-acetylglucosamine (GlcNAc) transferase [Source:HGNC Symbol;Acc:HGNC:8127]
18. STRAP ENSGALG00000013092 13100 0.973 - - - - - - 0.973 - - - serine/threonine kinase receptor associated protein [Source:NCBI gene;Acc:418175]
19. UBE2I ENSGALG00000006428 18421 0.972 - - - - - - 0.972 - - - ubiquitin conjugating enzyme E2 I [Source:NCBI gene;Acc:374123]
20. KIF23 ENSGALG00000008095 9919 0.971 - - - - - - 0.971 - - - kinesin family member 23 [Source:NCBI gene;Acc:415567]
21. DIABLO ENSGALG00000004412 9499 0.968 - - - - - - 0.968 - - - diablo IAP-binding mitochondrial protein, transcript variant X3
22. RND3 ENSGALG00000026313 9271 0.968 - - - - - - 0.968 - - - Rho family GTPase 3 [Source:HGNC Symbol;Acc:HGNC:671]
23. NCL ENSGALG00000032930 66655 0.966 - - - - - - 0.966 - - - nucleolin [Source:NCBI gene;Acc:396201]
24. ZNF462 ENSGALG00000015451 12653 0.965 - - - - - - 0.965 - - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
25. CCT8 ENSGALG00000015821 12161 0.965 - - - - - - 0.965 - - - chaperonin containing TCP1 subunit 8 [Source:NCBI gene;Acc:418486]
26. C4H8ORF40 C4H8ORF40 6145 0.963 - - - - - - 0.963 - - -
27. TRAPPC8 ENSGALG00000015157 4308 0.963 - - - - - - 0.963 - - - trafficking protein particle complex 8, transcript variant X5
28. ARG2 ENSGALG00000009519 19523 0.963 - - - - - - 0.963 - - - arginase 2 [Source:NCBI gene;Acc:423272]
29. ANO5 ENSGALG00000003748 3959 0.961 - - - - - - 0.961 - - - anoctamin 5 [Source:NCBI gene;Acc:422973]
30. C5H15ORF57 C5H15ORF57 4113 0.96 - - - - - - 0.960 - - -
31. LYN ENSGALG00000042321 3539 0.959 - - - - - - 0.959 - - - LYN proto-oncogene, Src family tyrosine kinase [Source:NCBI gene;Acc:421127]
32. PRKX ENSGALG00000042759 2418 0.959 - - - - - - 0.959 - - - protein kinase X-linked [Source:HGNC Symbol;Acc:HGNC:9441]
33. CAMK2D ENSGALG00000041635 3384 0.959 - - - - - - 0.959 - - - calcium/calmodulin dependent protein kinase II delta [Source:NCBI gene;Acc:422688]
34. RBM24 ENSGALG00000012712 4138 0.959 - - - - - - 0.959 - - - RNA binding motif protein 24 [Source:NCBI gene;Acc:420846]
35. SGK1 ENSGALG00000013971 2608 0.958 - - - - - - 0.958 - - - serum/glucocorticoid regulated kinase 1 [Source:NCBI gene;Acc:395133]
36. TF ENSGALG00000006453 14007 0.958 - - - - - - 0.958 - - - transferrin (ovotransferrin) [Source:NCBI gene;Acc:396241]
37. ENSGALG00000027132 ENSGALG00000027132 1704 0.957 - - - - - - 0.957 - - -
38. PUF60 ENSGALG00000039901 26902 0.957 - - - - - - 0.957 - - - poly(U) binding splicing factor 60 [Source:NCBI gene;Acc:426402]
39. WWP1 ENSGALG00000041795 2291 0.957 - - - - - - 0.957 - - - WW domain containing E3 ubiquitin protein ligase 1 [Source:NCBI gene;Acc:420212]
40. C10orf54 C10orf54 2444 0.956 - - - - - - 0.956 - - -
41. COMMD2 ENSGALG00000028001 18981 0.956 - - - - 0.956 - - - - - COMM domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24993]
42. NEK6 ENSGALG00000001118 20333 0.954 - - - - 0.954 - - - - - NIMA related kinase 6 [Source:NCBI gene;Acc:417101]
43. SERPINE2 ENSGALG00000005135 16108 0.953 - - - - - - 0.953 - - - serpin family E member 2 [Source:NCBI gene;Acc:424805]
44. DENR ENSGALG00000003795 30805 0.952 - - - - 0.952 - - - - - density regulated re-initiation and release factor [Source:NCBI gene;Acc:771794]
45. PSMG3 ENSGALG00000004203 11240 0.951 - - - - 0.951 - - - - - proteasome assembly chaperone 3 [Source:NCBI gene;Acc:416463]
46. ACAT2 ENSGALG00000011659 12825 0.95 - - - - 0.950 - - - - - acetyl-CoA acetyltransferase 2 [Source:NCBI gene;Acc:421587]
47. SDC3 ENSGALG00000035184 14096 0.95 - - - - - - 0.950 - - - syndecan 3 [Source:NCBI gene;Acc:396343]
48. TM9SF3 ENSGALG00000005534 15290 0.949 - - - - 0.949 - - - - - transmembrane 9 superfamily member 3
49. SPRED1 ENSGALG00000028203 6520 0.949 - - - - 0.949 - - - - - sprouty related EVH1 domain containing 1 [Source:NCBI gene;Acc:423292]
50. HARS ENSGALG00000035080 11602 0.948 - - - - 0.948 - - - - - histidyl-tRNA synthetase [Source:NCBI gene;Acc:416132]
51. PBRM1 ENSGALG00000037455 6450 0.948 - - - - 0.948 - - - - - polybromo 1 [Source:NCBI gene;Acc:396074]
52. PRCC ENSGALG00000040696 9346 0.948 - - - - 0.948 - - - - - proline rich mitotic checkpoint control factor [Source:HGNC Symbol;Acc:HGNC:9343]
53. WDR92 ENSGALG00000008760 3934 0.948 - - - - 0.948 - - - - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
54. LMAN2 ENSGALG00000033232 11740 0.947 - - - - 0.947 - - - - - lectin, mannose binding 2 [Source:HGNC Symbol;Acc:HGNC:16986]
55. NARS ENSGALG00000040506 9506 0.947 - - - - 0.947 - - - - - asparaginyl-tRNA synthetase [Source:NCBI gene;Acc:426856]
56. RPL22 ENSGALG00000000719 74238 0.947 - - - - 0.947 - - - - - ribosomal protein L22 [Source:NCBI gene;Acc:373937]
57. TIMMDC1 ENSGALG00000024480 9337 0.947 - - - - 0.947 - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:NCBI gene;Acc:418453]
58. MINOS1 ENSGALG00000004039 37740 0.946 - - - - 0.946 - - - - - mitochondrial inner membrane organizing system 1 [Source:NCBI gene;Acc:419474]
59. LZIC ENSGALG00000002616 9052 0.945 - - - - 0.945 - - - - - leucine zipper and CTNNBIP1 domain containing [Source:NCBI gene;Acc:419445]
60. TBRG4 ENSGALG00000038102 9269 0.945 - - - - - - 0.945 - - - transforming growth factor beta regulator 4 [Source:HGNC Symbol;Acc:HGNC:17443]
61. MED21 ENSGALG00000027435 5766 0.945 - - - - 0.945 - - - - - mediator complex subunit 21 [Source:HGNC Symbol;Acc:HGNC:11473]
62. NUP88 ENSGALG00000032280 9847 0.944 - - - - 0.944 - - - - - nucleoporin 88 [Source:HGNC Symbol;Acc:HGNC:8067]
63. STARD3NL ENSGALG00000033038 4851 0.944 - - - - 0.944 - - - - - STARD3 N-terminal like [Source:HGNC Symbol;Acc:HGNC:19169]
64. ENSGALG00000027854 ENSGALG00000027854 5007 0.944 - - - - 0.944 - - - - -
65. ZC3H6 ENSGALG00000008269 10353 0.943 - - - - 0.943 - - - - - zinc finger CCCH-type containing 6 [Source:NCBI gene;Acc:421230]
66. EDNRA ENSGALG00000010013 2472 0.943 - - - - 0.943 - - - - - endothelin receptor type A [Source:NCBI gene;Acc:373908]
67. DLD ENSGALG00000007931 11011 0.943 - - - - 0.943 - - - - - dihydrolipoamide dehydrogenase [Source:NCBI gene;Acc:417699]
68. CDKN1B ENSGALG00000022980 4606 0.943 - - - - 0.943 - - - - - cyclin dependent kinase inhibitor 1B [Source:NCBI gene;Acc:374106]
69. SNX14 ENSGALG00000015831 2554 0.943 - - - - 0.943 - - - - - sorting nexin 14 [Source:NCBI gene;Acc:421832]
70. RAD23B ENSGALG00000015540 10828 0.943 - - - - 0.943 - - - - - RAD23 homolog B, nucleotide excision repair protein [Source:HGNC Symbol;Acc:HGNC:9813]
71. SRP19 ENSGALG00000000218 14207 0.942 - - - - 0.942 - - - - - signal recognition particle 19 [Source:HGNC Symbol;Acc:HGNC:11300]
72. SPEN ENSGALG00000036932 9688 0.942 - - - - 0.942 - - - - - spen family transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:17575]
73. MRPL16 ENSGALG00000029419 8033 0.942 - - - - 0.942 - - - - - mitochondrial ribosomal protein L16 [Source:HGNC Symbol;Acc:HGNC:14476]
74. DGKZ ENSGALG00000008380 5389 0.942 - - - - 0.942 - - - - - diacylglycerol kinase zeta [Source:NCBI gene;Acc:423197]
75. CHMP5 ENSGALG00000013160 13347 0.942 - - - - 0.942 - - - - - charged multivesicular body protein 5 [Source:NCBI gene;Acc:420968]
76. NDUFS4 ENSGALG00000028026 25876 0.941 - - - - 0.941 - - - - - NADH:ubiquinone oxidoreductase subunit S4 [Source:HGNC Symbol;Acc:HGNC:7711]
77. Mar-05 Mar-05 6330 0.941 - - - - 0.941 - - - - -
78. PCMT1 ENSGALG00000012388 7778 0.941 - - - - - - 0.941 - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase [Source:NCBI gene;Acc:428607]
79. PSMD3 ENSGALG00000033162 25615 0.941 - - - - 0.941 - - - - - proteasome 26S subunit, non-ATPase 3 [Source:NCBI gene;Acc:426133]
80. RNF4 ENSGALG00000015668 15780 0.94 - - - - 0.940 - - - - - ring finger protein 4 [Source:NCBI gene;Acc:422886]
81. MYBL2 ENSGALG00000003503 15875 0.94 - - - - 0.940 - - - - - MYB proto-oncogene like 2 [Source:NCBI gene;Acc:396258]
82. BRF1 ENSGALG00000011705 3406 0.94 - - - - 0.940 - - - - - BRF1, RNA polymerase III transcription initiation factor subunit [Source:HGNC Symbol;Acc:HGNC:11551]
83. RBM34 ENSGALG00000029915 5618 0.94 - - - - 0.940 - - - - - RNA binding motif protein 34 [Source:HGNC Symbol;Acc:HGNC:28965]
84. KIF11 ENSGALG00000030597 5528 0.939 - - - - 0.939 - - - - - kinesin family member 11 [Source:NCBI gene;Acc:423809]
85. IARS2 ENSGALG00000009566 4599 0.939 - - - - 0.939 - - - - - isoleucyl-tRNA synthetase 2, mitochondrial [Source:NCBI gene;Acc:421346]
86. HSF2 ENSGALG00000038420 5259 0.939 - - - - 0.939 - - - - - heat shock transcription factor 2 [Source:NCBI gene;Acc:421724]
87. FNDC5 ENSGALG00000003567 3328 0.939 - - - - 0.939 - - - - - Gallus gallus fibronectin type III domain containing 5 (FNDC5), mRNA. [Source:RefSeq mRNA;Acc:NM_001318986]
88. ASAP2 ENSGALG00000016419 1393 0.939 - - - - 0.939 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [Source:HGNC Symbol;Acc:HGNC:2721]
89. SYNE1 ENSGALG00000013505 2324 0.939 - - - - 0.939 - - - - - spectrin repeat containing, nuclear envelope 1, transcript variant X3
90. PITHD1 ENSGALG00000003986 11470 0.939 - - - - 0.939 - - - - - PITH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25022]
91. ACTG1_1 ENSGALG00000001381 64662 0.938 - - - - 0.938 - - - - - Actin, gamma 1 [Source:NCBI gene;Acc:415296]
92. C9orf85 ENSGALG00000026001 4110 0.938 - - - - 0.938 - - - - - chromosome 9 open reading frame 85 [Source:HGNC Symbol;Acc:HGNC:28784]
93. SAP30 ENSGALG00000036252 2032 0.938 - - - - 0.938 - - - - - Sin3A associated protein 30 [Source:HGNC Symbol;Acc:HGNC:10532]
94. COQ5 ENSGALG00000007185 5614 0.938 - - - - 0.938 - - - - - coenzyme Q5, methyltransferase [Source:NCBI gene;Acc:416975]
95. ETS1 ENSGALG00000001143 7284 0.938 - - - - 0.938 - - - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:NCBI gene;Acc:396235]
96. ENSGALG00000006569 ENSGALG00000006569 2169 0.938 - - - - 0.938 - - - - -
97. MARC1 ENSGALG00000009453 5675 0.938 - - - - 0.938 - - - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
98. PHTF1 ENSGALG00000001845 3276 0.938 - - - - 0.938 - - - - - putative homeodomain transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:8939]
99. CDCA7 ENSGALG00000040833 7484 0.937 - - - - 0.937 - - - - - cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]
100. NDUFV1 ENSGALG00000042809 6222 0.937 - - - - 0.937 - - - - - NADH:ubiquinone oxidoreductase core subunit V1 [Source:NCBI gene;Acc:430210]

There are 203 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA