Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBE2D1

Gene Name Gene ID Reads Annotation
UBE2D1 ENSGALG00000021213 5876 ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]











Genes with expression patterns similar to UBE2D1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBE2D1 ENSGALG00000021213 5876 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
2. CHMP6 ENSGALG00000026428 18026 1.783 - - - - - - 0.854 0.929 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
3. ERGIC2 ENSGALG00000007183 12870 1.778 - - - - - - 0.852 0.926 - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
4. RBM17 ENSGALG00000006332 12656 1.769 - - - - 0.977 - 0.792 - - - RNA binding motif protein 17 [Source:HGNC Symbol;Acc:HGNC:16944]
5. TSC22D2 ENSGALG00000027591 6594 1.769 - - - - - - 0.816 0.953 - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
6. SCO1 ENSGALG00000030475 7304 1.757 - - - - - - 0.814 0.943 - - SCO1, cytochrome c oxidase assembly protein [Source:HGNC Symbol;Acc:HGNC:10603]
7. RUVBL1 ENSGALG00000005931 9379 1.742 - - - - - - 0.874 0.868 - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
8. SSR3 ENSGALG00000028683 24334 1.73 - - - - 0.924 - 0.806 - - - signal sequence receptor subunit 3 [Source:NCBI gene;Acc:425027]
9. ATG4C ENSGALG00000010985 6102 1.721 - - - - - - 0.820 0.901 - - autophagy related 4C cysteine peptidase [Source:HGNC Symbol;Acc:HGNC:16040]
10. AHCTF1 ENSGALG00000010630 4809 1.714 - - - - - - 0.784 0.930 - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
11. BCAP29 ENSGALG00000008009 8519 1.697 - - - - - - 0.800 0.897 - - B cell receptor associated protein 29 [Source:NCBI gene;Acc:417702]
12. MRPL20 ENSGALG00000001542 28764 1.696 - - - - - - 0.821 0.875 - - mitochondrial ribosomal protein L20 [Source:NCBI gene;Acc:770979]
13. MED24 ENSGALG00000013506 5403 1.686 - - - - - - 0.766 0.920 - - mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
14. TXNDC5 ENSGALG00000012784 4678 1.682 - - - - - - 0.757 0.925 - - thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
15. PIGK ENSGALG00000009015 7942 1.68 - - - - - - 0.777 0.903 - - phosphatidylinositol glycan anchor biosynthesis class K [Source:NCBI gene;Acc:424556]
16. MBD3 ENSGALG00000001101 37265 1.672 - - - - - - 0.757 0.915 - - methyl-CpG binding domain protein 3 [Source:NCBI gene;Acc:770153]
17. TMEM59 ENSGALG00000010746 4669 1.667 - - - - - - 0.760 0.907 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
18. HNRNPD ENSGALG00000011184 10686 1.66 - - - - - - 0.752 0.908 - - heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
19. HMGB2 ENSGALG00000010745 89235 1.656 - - - - 0.852 - 0.804 - - - high mobility group box 2 [Source:NCBI gene;Acc:396482]
20. SMDT1 ENSGALG00000011897 9360 1.652 - - - - - - 0.734 0.918 - - single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
21. CTSC ENSGALG00000017239 7651 1.652 - - - - - - 0.728 0.924 - - Gallus gallus cathepsin C (CTSC), mRNA. [Source:RefSeq mRNA;Acc:NM_001321554]
22. HPCAL1 ENSGALG00000016443 6633 1.652 - - - - - - 0.714 0.938 - - hippocalcin like 1 [Source:NCBI gene;Acc:396161]
23. CDC42BPA ENSGALG00000009158 3926 1.648 - - - - - - 0.707 0.941 - - CDC42 binding protein kinase alpha [Source:NCBI gene;Acc:416746]
24. BRCC3 ENSGALG00000005383 4844 1.645 - - - - 0.716 - - 0.929 - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
25. RNF214 ENSGALG00000036993 3729 1.639 - - - - - - 0.737 0.902 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
26. TBL1XR1 ENSGALG00000039182 16983 1.634 - - - - - - 0.766 0.868 - - transducin beta like 1 X-linked receptor 1 [Source:NCBI gene;Acc:426284]
27. VCAN ENSGALG00000015624 11489 1.627 - - - - - - 0.717 0.910 - - versican [Source:NCBI gene;Acc:395565]
28. MED28 ENSGALG00000007138 7686 1.589 - - - - - - 0.799 0.790 - - mediator complex subunit 28 [Source:HGNC Symbol;Acc:HGNC:24628]
29. SPG21 ENSGALG00000007262 8050 1.587 - - - - - - 0.719 0.868 - - SPG21, maspardin [Source:NCBI gene;Acc:415526]
30. LIMD1 ENSGALG00000035623 7282 1.581 - - - - - - 0.728 0.853 - - LIM domains containing 1 [Source:HGNC Symbol;Acc:HGNC:6612]
31. CHN1 ENSGALG00000009293 6415 1.577 - - - - - - 0.859 - - 0.718 chimerin 1 [Source:NCBI gene;Acc:429021]
32. NAA38 ENSGALG00000045783 11229 1.574 - - - - - - 0.774 0.800 - - N(alpha)-acetyltransferase 38, NatC auxiliary subunit, transcript variant X3
33. LEPREL4 LEPREL4 5609 1.569 - - - - - - 0.735 0.834 - -
34. RNPS1 ENSGALG00000009288 13588 1.554 - - - - - - 0.834 0.720 - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
35. AKAP1 ENSGALG00000005575 12051 1.538 - - - - 0.701 - 0.837 - - - A-kinase anchoring protein 1 [Source:HGNC Symbol;Acc:HGNC:367]
36. PAXIP1 ENSGALG00000036064 3120 1.508 - - - - 0.704 - 0.804 - - - PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]
37. ADSL ENSGALG00000012034 10280 1.5 - - - - 0.710 - 0.790 - - - adenylosuccinate lyase [Source:NCBI gene;Acc:396540]
38. MRPL53 ENSGALG00000037867 6100 1.497 - - - - - - 0.791 - 0.706 - mitochondrial ribosomal protein L53 [Source:NCBI gene;Acc:420196]
39. MPPED1 ENSGALG00000014186 5726 1.482 - - - - 0.704 - 0.778 - - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
40. PDHA1 ENSGALG00000016430 7070 1.474 - - - - - - 0.729 0.745 - - pyruvate dehydrogenase E1 alpha 1 subunit [Source:NCBI gene;Acc:418610]
41. COPG2 ENSGALG00000008144 4542 1.467 - - - - 0.721 - 0.746 - - - coatomer protein complex subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:2237]
42. GLB1L2 ENSGALG00000001604 4057 1.459 - - - - 0.705 - 0.754 - - - galactosidase beta 1 like 2 [Source:HGNC Symbol;Acc:HGNC:25129]
43. TMEM167A ENSGALG00000027332 13862 1.452 - - - - 0.702 - 0.750 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
44. GPALPP1 ENSGALG00000031567 4221 1.448 - - - - 0.705 - 0.743 - - - GPALPP motifs containing 1 [Source:NCBI gene;Acc:418842]
45. FAM18B1 ENSGALG00000001335 5177 1.442 - - - - 0.709 - 0.733 - - - family with sequence similarity 18, member B1 [Source:NCBI gene;Acc:417324]
46. PPDPF ENSGALG00000005849 16711 1.435 - - - - - - 0.705 0.730 - - pancreatic progenitor cell differentiation and proliferation factor [Source:NCBI gene;Acc:419245]
47. NMT1 ENSGALG00000000857 5770 1.433 - - - - 0.716 - 0.717 - - - N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:7857]
48. PPP4R2 ENSGALG00000007810 15127 0.962 - - - - 0.962 - - - - - protein phosphatase 4 regulatory subunit 2 [Source:NCBI gene;Acc:416098]
49. CHMP3 ENSGALG00000015805 11581 0.957 - - - - - - - 0.957 - - charged multivesicular body protein 3
50. CKAP2 ENSGALG00000017025 25020 0.952 - - - - - - - 0.952 - - cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
51. NDUFB3 ENSGALG00000008239 15511 0.952 - - - - - - - 0.952 - - NADH:ubiquinone oxidoreductase subunit B3 [Source:NCBI gene;Acc:424078]
52. MRPS23 ENSGALG00000005559 10360 0.947 - - - - - - - 0.947 - - mitochondrial ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:14509]
53. BID ENSGALG00000013039 12427 0.944 - - - - - - - 0.944 - - BH3 interacting domain death agonist [Source:NCBI gene;Acc:395236]
54. MRPL18 ENSGALG00000011625 7855 0.942 - - - - - - - 0.942 - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
55. SNAI2 ENSGALG00000030902 8201 0.937 - - - - - - - 0.937 - - snail family transcriptional repressor 2
56. SNAP29 ENSGALG00000040128 3581 0.937 - - - - - - - 0.937 - - synaptosome associated protein 29 [Source:NCBI gene;Acc:416766]
57. LATS2 4776 0.936 - - - - - - - 0.936 - - large tumor suppressor kinase 2
58. ENSGALG00000003150 ENSGALG00000003150 10001 0.934 - - - - - - - 0.934 - -
59. ZNF326 ENSGALG00000006113 15141 0.934 - - - - - - - 0.934 - - zinc finger protein 326 [Source:NCBI gene;Acc:424512]
60. MARC1 ENSGALG00000009453 5675 0.934 - - - - - - - 0.934 - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
61. BAG3 ENSGALG00000009433 6152 0.931 - - - - - - - 0.931 - - BCL2 associated athanogene 3 [Source:HGNC Symbol;Acc:HGNC:939]
62. FXR1 ENSGALG00000008864 10250 0.93 - - - - - - - 0.930 - - FMR1 autosomal homolog 1 [Source:NCBI gene;Acc:424968]
63. DPYD ENSGALG00000005509 4115 0.93 - - - - - - - 0.930 - - dihydropyrimidine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3012]
64. GFPT1 ENSGALG00000036391 14025 0.93 - - - - - - - 0.930 - - glutamine--fructose-6-phosphate transaminase 1 [Source:NCBI gene;Acc:419514]
65. FBXO33 ENSGALG00000010192 2917 0.93 - - - - - - - 0.930 - - F-box protein 33 [Source:HGNC Symbol;Acc:HGNC:19833]
66. CENPH ENSGALG00000014788 10601 0.928 - - - - - - - 0.928 - - centromere protein H [Source:NCBI gene;Acc:395316]
67. LIG3 ENSGALG00000002288 7198 0.926 - - - - - - - 0.926 - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
68. MAST2 ENSGALG00000010313 2975 0.925 - - - - - - - 0.925 - - microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]
69. SLC35E3 ENSGALG00000009940 8560 0.923 - - - - - - - 0.923 - - solute carrier family 35 member E3 [Source:NCBI gene;Acc:417842]
70. MAPK9 ENSGALG00000039099 5467 0.922 - - - - - - - 0.922 - - mitogen-activated protein kinase 9 [Source:NCBI gene;Acc:395983]
71. MTERFD1 MTERFD1 3640 0.922 - - - - - - - 0.922 - -
72. TRIM24 ENSGALG00000012823 2725 0.922 - - - - - - - 0.922 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
73. PGAM5 ENSGALG00000002137 7700 0.921 - - - - - - - 0.921 - - PGAM family member 5, mitochondrial serine/threonine protein phosphatase [Source:HGNC Symbol;Acc:HGNC:28763]
74. NDUFAF1 ENSGALG00000008587 14779 0.917 - - - - - - - 0.917 - - NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
75. RDM1 ENSGALG00000000243 3388 0.917 - - - - - - - 0.917 - - RAD52 motif containing 1 [Source:NCBI gene;Acc:395228]
76. GLG1 ENSGALG00000039818 6221 0.914 - - - - - - - 0.914 - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]
77. SRP72 ENSGALG00000011403 13666 0.914 - - - - - - - 0.914 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
78. PPCS ENSGALG00000004882 5759 0.914 - - - - - - - 0.914 - - phosphopantothenoylcysteine synthetase [Source:HGNC Symbol;Acc:HGNC:25686]
79. PEO1 PEO1 6747 0.913 - - - - - - - 0.913 - -
80. CEP170 ENSGALG00000010733 4177 0.913 - - - - - - - 0.913 - - centrosomal protein 170 [Source:HGNC Symbol;Acc:HGNC:28920]
81. EFTUD2 ENSGALG00000000988 17913 0.912 - - - - - - - 0.912 - - elongation factor Tu GTP binding domain containing 2 [Source:NCBI gene;Acc:428281]
82. TCEA1 ENSGALG00000015274 2706 0.911 - - - - - - - 0.911 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]
83. ECHS1 ENSGALG00000024271 9364 0.911 - - - - - - - 0.911 - - enoyl-CoA hydratase, short chain 1 [Source:NCBI gene;Acc:770828]
84. KDM4A ENSGALG00000010074 7219 0.911 - - - - - - - 0.911 - - lysine demethylase 4A
85. NET1 ENSGALG00000008437 9850 0.911 - - - - - - - 0.911 - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
86. PPP2CA ENSGALG00000006462 26306 0.91 - - - - 0.910 - - - - - protein phosphatase 2 catalytic subunit alpha [Source:NCBI gene;Acc:416318]
87. BCLAF1 ENSGALG00000013935 7596 0.909 - - - - - - - 0.909 - - BCL2 associated transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:16863]
88. ARFRP1 ENSGALG00000006101 3743 0.909 - - - - - - - 0.909 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
89. SLC25A1 ENSGALG00000041760 4744 0.908 - - - - - - - 0.908 - - solute carrier family 25 member 1, transcript variant X2
90. XPO6 ENSGALG00000035360 7042 0.907 - - - - - - - 0.907 - - exportin 6 [Source:HGNC Symbol;Acc:HGNC:19733]
91. CAMSAP2 ENSGALG00000002145 6109 0.907 - - - - - - - 0.907 - - calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
92. VGLL4 ENSGALG00000004937 3762 0.906 - - - - - - - 0.906 - - vestigial like family member 4 [Source:NCBI gene;Acc:415962]
93. NDUFS6 ENSGALG00000013191 15874 0.905 - - - - - - - 0.905 - - NADH:ubiquinone oxidoreductase subunit S6 [Source:HGNC Symbol;Acc:HGNC:7713]
94. SMIM12 ENSGALG00000030261 5860 0.904 - - - - - - - 0.904 - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
95. RNF144A ENSGALG00000028709 2855 0.903 - - - - - - - 0.903 - - ring finger protein 144A, transcript variant X1
96. NAE1 ENSGALG00000038957 13777 0.903 - - - - - - - 0.903 - - NEDD8 activating enzyme E1 subunit 1 [Source:NCBI gene;Acc:415792]
97. CPQ ENSGALG00000030866 3962 0.902 - - - - - - - 0.902 - - carboxypeptidase Q [Source:NCBI gene;Acc:420238]
98. UCK2 ENSGALG00000003510 2512 0.901 - - - - - - - 0.901 - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
99. NCAM1 ENSGALG00000007839 19929 0.901 - - - - - - - 0.901 - - Gallus gallus neural cell adhesion molecule 1 (NCAM1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001242604]
100. FGFR1OP ENSGALG00000011423 2418 0.9 - - - - - - - 0.900 - - FGFR1 oncogene partner [Source:HGNC Symbol;Acc:HGNC:17012]

There are 934 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA