Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBE2B

Gene Name Gene ID Reads Annotation
UBE2B ENSGALG00000032664 6069 ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]











Genes with expression patterns similar to UBE2B

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBE2B ENSGALG00000032664 6069 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 ubiquitin conjugating enzyme E2 B [Source:HGNC Symbol;Acc:HGNC:12473]
2. IFT81 ENSGALG00000003854 2534 1.877 - - 0.889 - - - - 0.988 - - intraflagellar transport 81 [Source:NCBI gene;Acc:416839]
3. WDR92 ENSGALG00000008760 3934 1.838 - - 0.851 - - - - 0.987 - - WD repeat domain 92 [Source:NCBI gene;Acc:769534]
4. SURF6 ENSGALG00000038413 11178 1.797 - - 0.812 - - - - 0.985 - - surfeit 6 [Source:NCBI gene;Acc:417160]
5. PES1 ENSGALG00000007778 12248 1.76 - - - - - - 0.773 0.987 - - pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]
6. CMPK CMPK 9569 1.757 - - - - - - 0.776 0.981 - -
7. FZD6 ENSGALG00000030626 3336 1.73 - - 0.750 - - - - 0.980 - - frizzled class receptor 6 [Source:NCBI gene;Acc:378788]
8. CASK ENSGALG00000042400 8485 1.72 - - - - - - 0.794 0.926 - - calcium/calmodulin dependent serine protein kinase [Source:HGNC Symbol;Acc:HGNC:1497]
9. NEK1 ENSGALG00000009683 4305 1.712 - - 0.730 - - - - 0.982 - - NIMA related kinase 1 [Source:HGNC Symbol;Acc:HGNC:7744]
10. FOXK2 ENSGALG00000001577 6346 1.703 - - 0.790 - - - - 0.913 - - forkhead box K2 [Source:HGNC Symbol;Acc:HGNC:6036]
11. TET1 ENSGALG00000031604 13002 1.693 - - - - - - 0.775 0.918 - - tet methylcytosine dioxygenase 1 [Source:HGNC Symbol;Acc:HGNC:29484]
12. ASF1A ENSGALG00000014887 11319 1.686 - - - - - - 0.767 0.919 - - anti-silencing function 1A histone chaperone [Source:NCBI gene;Acc:723780]
13. WDR61 ENSGALG00000003221 11352 1.682 - - - - - - 0.709 0.973 - - WD repeat domain 61 [Source:NCBI gene;Acc:415359]
14. EHMT1 ENSGALG00000033678 5720 1.673 - - - - - - 0.759 0.914 - - euchromatic histone lysine methyltransferase 1 [Source:NCBI gene;Acc:417250]
15. ACTN1 ENSGALG00000042458 10477 1.663 - - - - - - 0.745 0.918 - - actinin, alpha 1 [Source:NCBI gene;Acc:373918]
16. DKC1 ENSGALG00000005054 30350 1.639 - - - - - - 0.795 0.844 - - dyskerin pseudouridine synthase 1 [Source:NCBI gene;Acc:422196]
17. SHMT1 ENSGALG00000005046 1430 1.627 - - 0.884 - - - 0.743 - - - serine hydroxymethyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10850]
18. TMEM167A ENSGALG00000027332 13862 1.626 - - 0.791 - - - 0.835 - - - transmembrane protein 167A [Source:NCBI gene;Acc:770790]
19. PTCD3 ENSGALG00000015773 3059 1.615 - - 0.878 - - - 0.737 - - - pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]
20. FAM168B ENSGALG00000002172 12162 1.614 - - 0.771 - - - - 0.843 - - family with sequence similarity 168 member B [Source:HGNC Symbol;Acc:HGNC:27016]
21. CDC40 ENSGALG00000015061 6118 1.608 - - - - - - 0.755 0.853 - - cell division cycle 40 [Source:NCBI gene;Acc:421760]
22. SMC4 ENSGALG00000009553 15715 1.606 - - 0.781 - - - 0.825 - - - structural maintenance of chromosomes 4 [Source:NCBI gene;Acc:395189]
23. NDUFC2 ENSGALG00000029172 26136 1.601 - - 0.880 - - - 0.721 - - - NADH:ubiquinone oxidoreductase subunit C2 [Source:NCBI gene;Acc:404751]
24. FARSB ENSGALG00000005236 10738 1.601 - - - - - - 0.789 0.812 - - phenylalanyl-tRNA synthetase subunit beta [Source:NCBI gene;Acc:424812]
25. UBR2 ENSGALG00000009906 7717 1.593 - - 0.807 - - - 0.786 - - - ubiquitin protein ligase E3 component n-recognin 2 [Source:HGNC Symbol;Acc:HGNC:21289]
26. GTF2H2 ENSGALG00000002399 2361 1.589 - - 0.884 - - - 0.705 - - - general transcription factor IIH subunit 2, transcript variant X2
27. CDC45 ENSGALG00000001616 8432 1.571 - - 0.772 - - - 0.799 - - - cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]
28. UBE2E3 ENSGALG00000020793 9517 1.57 - - 0.843 - - - 0.727 - - - ubiquitin conjugating enzyme E2 E3 [Source:NCBI gene;Acc:424122]
29. TMEM184C ENSGALG00000010019 7856 1.569 - - - - - - 0.760 0.809 - - transmembrane protein 184C [Source:NCBI gene;Acc:422469]
30. NUPL1 NUPL1 8197 1.564 - - 0.741 - - - 0.823 - - -
31. CHN1 ENSGALG00000009293 6415 1.559 - - 0.746 - - - 0.813 - - - chimerin 1 [Source:NCBI gene;Acc:429021]
32. NAV2 ENSGALG00000003999 6587 1.554 - - - - - - 0.765 0.789 - - neuron navigator 2 [Source:HGNC Symbol;Acc:HGNC:15997]
33. CCDC88C ENSGALG00000040156 6191 1.551 - - 0.799 - - - 0.752 - - - coiled-coil domain containing 88C [Source:HGNC Symbol;Acc:HGNC:19967]
34. AGFG1 ENSGALG00000003052 4766 1.549 - - 0.751 - - - 0.798 - - - ArfGAP with FG repeats 1 [Source:HGNC Symbol;Acc:HGNC:5175]
35. ENSGALG00000014171 ENSGALG00000014171 10383 1.546 - - - - - - 0.718 0.828 - -
36. SP3 ENSGALG00000031796 8997 1.539 - - 0.800 - - - 0.739 - - - Sp3 transcription factor [Source:NCBI gene;Acc:395302]
37. GABARAPL2 ENSGALG00000003208 9195 1.539 - - 0.718 - - - 0.821 - - - GABA type A receptor associated protein like 2 [Source:HGNC Symbol;Acc:HGNC:13291]
38. ZNHIT3 ENSGALG00000026031 8652 1.538 - - 0.761 - - - 0.777 - - - zinc finger HIT-type containing 3 [Source:HGNC Symbol;Acc:HGNC:12309]
39. CARS ENSGALG00000006427 7660 1.531 - - - - - - 0.734 0.797 - - cysteinyl-tRNA synthetase [Source:NCBI gene;Acc:423086]
40. PSMB2 ENSGALG00000026421 51885 1.531 - - 0.729 - - - 0.802 - - - proteasome subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:9539]
41. SPCS1 ENSGALG00000001655 7718 1.529 - - 0.718 - - - 0.811 - - - signal peptidase complex subunit 1 [Source:NCBI gene;Acc:415899]
42. NCAPD2 ENSGALG00000039448 8658 1.526 - - 0.802 - - - 0.724 - - - non-SMC condensin I complex subunit D2 [Source:NCBI gene;Acc:418275]
43. C6ORF162 C6ORF162 4217 1.524 - - 0.771 - - - 0.753 - - -
44. SPDL1 ENSGALG00000001942 4403 1.523 - - 0.805 - - - 0.718 - - - spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]
45. BMS1 ENSGALG00000002624 8339 1.517 - - 0.729 - - - 0.788 - - - BMS1, ribosome biogenesis factor [Source:NCBI gene;Acc:423633]
46. XRCC5 ENSGALG00000011492 6802 1.508 - - 0.730 - - - 0.778 - - - X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]
47. OTUD6B ENSGALG00000041337 15657 1.503 - - 0.781 - - - - 0.722 - - OTU domain containing 6B [Source:NCBI gene;Acc:420222]
48. PTK2 ENSGALG00000031741 13103 1.501 - - - - - - 0.712 0.789 - - protein tyrosine kinase 2 [Source:NCBI gene;Acc:396416]
49. AHCTF1 ENSGALG00000010630 4809 1.5 - - 0.711 - - - 0.789 - - - AT-hook containing transcription factor 1 [Source:NCBI gene;Acc:421484]
50. ATG5 ENSGALG00000015387 7752 1.494 - - 0.761 - - - 0.733 - - - autophagy related 5 [Source:NCBI gene;Acc:421784]
51. SPCS3 ENSGALG00000010839 19106 1.49 - - 0.729 - - - 0.761 - - - signal peptidase complex subunit 3 [Source:NCBI gene;Acc:396234]
52. HCFC2 ENSGALG00000029616 4525 1.488 - - 0.762 - - - 0.726 - - - host cell factor C2 [Source:HGNC Symbol;Acc:HGNC:24972]
53. GLI3 ENSGALG00000040266 9981 1.487 - - - - - - 0.759 0.728 - - GLI family zinc finger 3 [Source:NCBI gene;Acc:420769]
54. ACTR8 ENSGALG00000005385 3647 1.487 - - 0.761 - - - 0.726 - - - ARP8 actin related protein 8 homolog [Source:HGNC Symbol;Acc:HGNC:14672]
55. NFI1 NFI1 6210 1.484 - - 0.736 - - - 0.748 - - -
56. MARC1 ENSGALG00000009453 5675 1.473 - - 0.761 - - - 0.712 - - - mitochondrial amidoxime reducing component 1 [Source:NCBI gene;Acc:428563]
57. UTP6 ENSGALG00000003260 4909 1.458 - - 0.741 - - - 0.717 - - - UTP6, small subunit processome component [Source:NCBI gene;Acc:417405]
58. DCUN1D1 ENSGALG00000008807 6545 1.449 - - 0.749 - - - 0.700 - - - defective in cullin neddylation 1 domain containing 1 [Source:NCBI gene;Acc:424963]
59. DNM1L ENSGALG00000012929 6174 1.439 - - 0.705 - - - 0.734 - - - dynamin 1 like [Source:NCBI gene;Acc:418132]
60. AVENAII AVENAII 4552 1.432 - - 0.714 - - - 0.718 - - -
61. SCML2 ENSGALG00000016537 9348 1.431 - - 0.730 - - - 0.701 - - - Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]
62. HCCS ENSGALG00000005571 4939 1.419 - - 0.706 - - - 0.713 - - - holocytochrome c synthase [Source:NCBI gene;Acc:424482]
63. EMC7 ENSGALG00000009637 4969 0.991 - - - - - - - 0.991 - - ER membrane protein complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:24301]
64. TBC1D1 ENSGALG00000039380 4423 0.991 - - - - - - - 0.991 - - TBC1 domain family member 1 [Source:NCBI gene;Acc:426162]
65. EIF1AY ENSGALG00000016410 6431 0.99 - - - - - - - 0.990 - - eukaryotic translation initiation factor 1A, Y-linked [Source:NCBI gene;Acc:418606]
66. C4orf46 ENSGALG00000009432 3255 0.988 - - - - - - - 0.988 - - chromosome 4 open reading frame 46 [Source:HGNC Symbol;Acc:HGNC:27320]
67. ATOX1 ENSGALG00000004176 16486 0.987 - - - - - - - 0.987 - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
68. ZEB1 ENSGALG00000007260 9277 0.987 - - - - - - - 0.987 - - zinc finger E-box binding homeobox 1 [Source:NCBI gene;Acc:396029]
69. DEK ENSGALG00000012684 14179 0.987 - - - - - - - 0.987 - - DEK proto-oncogene [Source:NCBI gene;Acc:420828]
70. SOX9 ENSGALG00000004386 14802 0.987 - - - - - - - 0.987 - - SRY (sex determining region Y)-box 9 [Source:NCBI gene;Acc:374148]
71. SDHA ENSGALG00000013167 6509 0.987 - - - - - - - 0.987 - - succinate dehydrogenase complex flavoprotein subunit A [Source:NCBI gene;Acc:395758]
72. DCTN6 ENSGALG00000010298 7507 0.986 - - - - - - - 0.986 - - dynactin subunit 6 [Source:NCBI gene;Acc:771257]
73. ELP3 ENSGALG00000016624 4483 0.986 - - - - - - - 0.986 - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
74. MED1 ENSGALG00000001708 9556 0.984 - - - - - - - 0.984 - - mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]
75. BCL2L1 ENSGALG00000006211 2490 0.984 - - - - - - - 0.984 - - BCL2 like 1 [Source:NCBI gene;Acc:373954]
76. VPS39 ENSGALG00000008991 4018 0.984 - - - - - - - 0.984 - - VPS39, HOPS complex subunit [Source:NCBI gene;Acc:423230]
77. PDS5B ENSGALG00000017070 3998 0.984 - - - - - - - 0.984 - - PDS5 cohesin associated factor B [Source:NCBI gene;Acc:418910]
78. ANKRD49 ENSGALG00000017210 3247 0.983 - - - - - - - 0.983 - - ankyrin repeat domain 49 [Source:HGNC Symbol;Acc:HGNC:25970]
79. ARPC5L ENSGALG00000001014 5642 0.983 - - - - - - - 0.983 - - actin related protein 2/3 complex subunit 5 like [Source:HGNC Symbol;Acc:HGNC:23366]
80. HEXA ENSGALG00000043828 4789 0.982 - - - - - - - 0.982 - - hexosaminidase subunit alpha [Source:NCBI gene;Acc:415320]
81. CHEK2 ENSGALG00000005695 1558 0.982 - - - - - - - 0.982 - - checkpoint kinase 2 [Source:NCBI gene;Acc:768913]
82. TAB2 ENSGALG00000012356 3467 0.982 - - - - - - - 0.982 - - TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17075]
83. UQCC UQCC 5913 0.982 - - - - - - - 0.982 - -
84. POLR2H ENSGALG00000008534 21521 0.981 - - - - - - - 0.981 - - RNA polymerase II subunit H [Source:NCBI gene;Acc:424954]
85. STXBP3 ENSGALG00000002001 1740 0.981 - - - - - - - 0.981 - - syntaxin binding protein 3 [Source:NCBI gene;Acc:424341]
86. GTF2H1 ENSGALG00000042340 1553 0.981 - - - - - - - 0.981 - - general transcription factor IIH subunit 1 [Source:NCBI gene;Acc:423081]
87. PDIA3 ENSGALG00000008348 4982 0.981 - - - - - - - 0.981 - - protein disulfide isomerase family A member 3 [Source:NCBI gene;Acc:373899]
88. DUSP3 ENSGALG00000035369 1790 0.98 - - - - - - - 0.980 - - dual specificity phosphatase 3
89. ERICH1 ENSGALG00000031021 1495 0.98 - - - - - - - 0.980 - - glutamate rich 1 [Source:NCBI gene;Acc:421904]
90. LUC7L2 ENSGALG00000036238 11817 0.98 - - - - - - - 0.980 - - LUC7 like 2, pre-mRNA splicing factor [Source:NCBI gene;Acc:417971]
91. C20ORF7 C20ORF7 2383 0.98 - - - - - - - 0.980 - -
92. EFNB1 ENSGALG00000036539 2706 0.98 - - - - - - - 0.980 - - ephrin B1 [Source:NCBI gene;Acc:395896]
93. XPOT ENSGALG00000009835 2953 0.98 - - - - - - - 0.980 - - exportin for tRNA [Source:NCBI gene;Acc:417824]
94. FAM69B ENSGALG00000002437 1253 0.979 - - - - - - - 0.979 - - family with sequence similarity 69 member B [Source:HGNC Symbol;Acc:HGNC:28290]
95. C12orf45 C12orf45 2445 0.979 - - - - - - - 0.979 - -
96. PIK3C2B ENSGALG00000037043 4522 0.979 - - - - - - - 0.979 - - phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]
97. FPGS ENSGALG00000042460 1749 0.979 - - - - - - - 0.979 - - folylpolyglutamate synthase [Source:HGNC Symbol;Acc:HGNC:3824]
98. PDE4B ENSGALG00000011094 1871 0.977 - - - - - - - 0.977 - - phosphodiesterase 4B [Source:NCBI gene;Acc:424700]
99. CRADD ENSGALG00000011297 1653 0.977 - - - - - - - 0.977 - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:NCBI gene;Acc:417900]
100. ERAL1 ENSGALG00000003995 1114 0.977 - - - - - - - 0.977 - - Era like 12S mitochondrial rRNA chaperone 1 [Source:NCBI gene;Acc:374084]

There are 960 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA