Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBB

Gene Name Gene ID Reads Annotation
UBB ENSGALG00000004509 139598 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]











Genes with expression patterns similar to UBB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBB ENSGALG00000004509 139598 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Gallus gallus ubiquitin B (UBB), mRNA. [Source:RefSeq mRNA;Acc:NM_001353988]
2. YWHAH ENSGALG00000006743 29828 0.964 - - - - - - 0.964 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta [Source:NCBI gene;Acc:416955]
3. PHB2 ENSGALG00000014567 104774 0.958 - - - - - - 0.958 - - - prohibitin 2 [Source:NCBI gene;Acc:771124]
4. CCNB2 ENSGALG00000004161 50324 0.957 - - - - - - 0.957 - - - cyclin B2 [Source:NCBI gene;Acc:415400]
5. HP1BP3 ENSGALG00000010079 33723 0.955 - - - - - - 0.955 - - - heterochromatin protein 1 binding protein 3 [Source:NCBI gene;Acc:425543]
6. RPL23A ENSGALG00000003966 369097 0.952 - - - - - - 0.952 - - - ribosomal protein L23a [Source:HGNC Symbol;Acc:HGNC:10317]
7. RPL30 ENSGALG00000029897 58241 0.946 - - - - - - 0.946 - - - ribosomal protein L30 [Source:NCBI gene;Acc:425416]
8. CHCHD2 ENSGALG00000002495 99536 0.945 - - - - - - 0.945 - - - coiled-coil-helix-coiled-coil-helix domain containing 2 [Source:NCBI gene;Acc:417544]
9. EIF3H ENSGALG00000040522 39919 0.94 - - - - - - 0.940 - - - eukaryotic translation initiation factor 3 subunit H [Source:NCBI gene;Acc:420288]
10. MPHOSPH6 ENSGALG00000031983 17073 0.939 - - - - - - 0.939 - - - M-phase phosphoprotein 6 [Source:NCBI gene;Acc:415811]
11. EEF2 ENSGALG00000033884 62036 0.935 - - - - - - 0.935 - - - eukaryotic translation elongation factor 2 [Source:NCBI gene;Acc:396325]
12. MYH10 ENSGALG00000001183 26889 0.934 - - - - - - 0.934 - - - myosin, heavy chain 10, non-muscle [Source:NCBI gene;Acc:396465]
13. S100A11 ENSGALG00000036711 23454 0.93 - - - - - - 0.930 - - - S100 calcium binding protein A11 [Source:NCBI gene;Acc:396075]
14. COPS5 ENSGALG00000030843 11942 0.925 - - - - - - 0.925 - - - COP9 signalosome subunit 5 [Source:NCBI gene;Acc:426579]
15. KDM2B ENSGALG00000004225 11513 0.923 - - - - - - 0.923 - - - lysine demethylase 2B [Source:HGNC Symbol;Acc:HGNC:13610]
16. RTF1 ENSGALG00000008595 31933 0.92 - - - - - - 0.920 - - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:HGNC Symbol;Acc:HGNC:28996]
17. HSP90AA1 ENSGALG00000033212 55740 0.918 - - - - - - 0.918 - - - heat shock protein 90 alpha family class A member 1 [Source:NCBI gene;Acc:423463]
18. PRKCI ENSGALG00000009364 11574 0.917 - - - - - - 0.917 - - - protein kinase C iota [Source:NCBI gene;Acc:424991]
19. NDUFA5 ENSGALG00000008821 22926 0.917 - - - - - - 0.917 - - - NADH:ubiquinone oxidoreductase subunit A5 [Source:NCBI gene;Acc:417753]
20. STAM ENSGALG00000035287 7649 0.914 - - - - - - 0.914 - - - signal transducing adaptor molecule [Source:HGNC Symbol;Acc:HGNC:11357]
21. KIAA1143 ENSGALG00000035952 6735 0.912 - - - - - - 0.912 - - - KIAA1143 [Source:NCBI gene;Acc:420709]
22. PLEKHH2 ENSGALG00000009947 6384 0.912 - - - - - - 0.912 - - - pleckstrin homology, MyTH4 and FERM domain containing H2 [Source:HGNC Symbol;Acc:HGNC:30506]
23. MYLK ENSGALG00000011708 10434 0.912 - - - - - - 0.912 - - - Gallus gallus myosin light chain kinase (MYLK), transcript variant 1, mRNA. [Source:RefSeq mRNA;Acc:NM_001322361]
24. AIFM1 ENSGALG00000004003 10451 0.91 - - - - - - 0.910 - - - apoptosis inducing factor mitochondria associated 1 [Source:NCBI gene;Acc:428688]
25. DAP ENSGALG00000013002 6815 0.908 - - - - - - 0.908 - - - death associated protein [Source:NCBI gene;Acc:420923]
26. SEC11C ENSGALG00000031663 4266 0.907 - - - - - - 0.907 - - - SEC11 homolog C, signal peptidase complex subunit [Source:HGNC Symbol;Acc:HGNC:23400]
27. MEIS1 ENSGALG00000041626 3865 0.907 - - - - - - 0.907 - - - Meis homeobox 1 [Source:NCBI gene;Acc:395589]
28. TYW3 ENSGALG00000032549 4869 0.906 - - - - - - 0.906 - - - tRNA-yW synthesizing protein 3 homolog [Source:NCBI gene;Acc:424720]
29. ACADSB ENSGALG00000041417 7710 0.905 - - - - - - 0.905 - - - acyl-CoA dehydrogenase short/branched chain [Source:NCBI gene;Acc:423947]
30. CUX1_1 ENSGALG00000021636 3705 0.904 - - - - - - 0.904 - - - cut like homeobox 1 [Source:NCBI gene;Acc:101749861]
31. CFC1 ENSGALG00000012623 3164 0.903 - - - - - - 0.903 - - - cripto, FRL-1, cryptic family 1 [Source:NCBI gene;Acc:395437]
32. NUBP2 ENSGALG00000002316 3643 0.903 - - - - - - 0.903 - - - nucleotide binding protein 2 [Source:NCBI gene;Acc:416402]
33. N6AMT2 N6AMT2 4703 0.902 - - - - - - 0.902 - - -
34. ZFAND1 ENSGALG00000042794 2849 0.901 - - - - - - 0.901 - - - zinc finger AN1-type containing 1 [Source:HGNC Symbol;Acc:HGNC:25858]
35. TTR ENSGALG00000015143 9764 0.897 - - - - - - 0.897 - - - transthyretin [Source:NCBI gene;Acc:396277]
36. ATP2B4 ENSGALG00000003601 3746 0.897 - - - - - - 0.897 - - - ATPase plasma membrane Ca2+ transporting 4 [Source:HGNC Symbol;Acc:HGNC:817]
37. MAPK6 ENSGALG00000031448 28384 0.821 - - - - - - 0.821 - - - mitogen-activated protein kinase 6 [Source:NCBI gene;Acc:415419]
38. HNRNPAB ENSGALG00000014381 41009 0.815 - - - - - - 0.815 - - - heterogeneous nuclear ribonucleoprotein A/B [Source:NCBI gene;Acc:396268]
39. RBX1 ENSGALG00000011993 26090 0.799 - - - - - - 0.799 - - - ring-box 1 [Source:NCBI gene;Acc:418001]
40. RPS16 ENSGALG00000026490 250568 0.794 - - - - - - 0.794 - - - ribosomal protein S16 [Source:HGNC Symbol;Acc:HGNC:10396]
41. RGP1 ENSGALG00000002394 5937 0.775 - - - - - - 0.775 - - - RGP1 homolog, RAB6A GEF complex partner 1 [Source:NCBI gene;Acc:431658]
42. PPDPF ENSGALG00000005849 16711 0.75 - - - - 0.750 - - - - - pancreatic progenitor cell differentiation and proliferation factor [Source:NCBI gene;Acc:419245]
43. OSTC ENSGALG00000010526 19422 0.747 - - - - - 0.747 - - - - oligosaccharyltransferase complex non-catalytic subunit [Source:NCBI gene;Acc:422525]
44. SEC61B ENSGALG00000013569 48883 0.746 - - - - - - - 0.746 - - Sec61 translocon beta subunit [Source:NCBI gene;Acc:420997]
45. WBP4 ENSGALG00000016949 5858 0.736 - - - - 0.736 - - - - - WW domain binding protein 4 [Source:NCBI gene;Acc:418829]
46. TXN ENSGALG00000015704 170016 0.732 - - - - 0.732 - - - - - thioredoxin [Source:NCBI gene;Acc:396437]
47. RPL3 ENSGALG00000012172 118287 0.729 - - - - 0.729 - - - - - ribosomal protein L3 [Source:NCBI gene;Acc:418016]
48. SPOCK1 ENSGALG00000006258 2892 0.719 - - - - - 0.719 - - - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:HGNC Symbol;Acc:HGNC:11251]
49. CADPS 33 0.717 - - - - - 0.717 - - - - calcium dependent secretion activator, transcript variant X19
50. CWC15 ENSGALG00000017207 30922 0.715 - - - - 0.715 - - - - - CWC15 spliceosome associated protein homolog [Source:NCBI gene;Acc:418996]
51. PUM2 ENSGALG00000016481 23625 0.711 - - - - - - 0.711 - - - pumilio RNA binding family member 2 [Source:NCBI gene;Acc:421961]
52. PCDHGC3 ENSGALG00000028565 18583 0.709 - - - - 0.709 - - - - - Gallus gallus protocadherin gamma subfamily A, 2 (PCDHGA2), mRNA. [Source:RefSeq mRNA;Acc:NM_001245037]
53. UGGT2 ENSGALG00000016893 206 0.705 - - - - - 0.705 - - - - UDP-glucose glycoprotein glucosyltransferase 2 [Source:NCBI gene;Acc:418785]
54. NIP7 ENSGALG00000000650 23932 0.705 - - - - - 0.705 - - - - NIP7, nucleolar pre-rRNA processing protein [Source:NCBI gene;Acc:415863]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA