Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for UBAP1

Gene Name Gene ID Reads Annotation
UBAP1 ENSGALG00000021378 11 ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:12461]











Genes with expression patterns similar to UBAP1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. UBAP1 ENSGALG00000021378 11 6 - - 1.000 1.000 1.000 1.000 1.000 1.000 - - ubiquitin associated protein 1 [Source:HGNC Symbol;Acc:HGNC:12461]
2. FZD10 ENSGALG00000042003 11 2 - - - 1.000 - - 1.000 - - - frizzled class receptor 10 [Source:NCBI gene;Acc:373885]
3. PRSS56 ENSGALG00000045413 17 2 - - - 1.000 - 1.000 - - - - serine protease 56 [Source:HGNC Symbol;Acc:HGNC:39433]
4. C1orf112 ENSGALG00000032743 8 1.86 - - - 1.000 0.860 - - - - - chromosome 1 open reading frame 112 [Source:HGNC Symbol;Acc:HGNC:25565]
5. ARHGAP31 ENSGALG00000015077 19 1.86 - - - 1.000 0.860 - - - - - Rho GTPase activating protein 31 [Source:HGNC Symbol;Acc:HGNC:29216]
6. C7orf57 C7orf57 1 1.854 - - 0.854 - - 1.000 - - - -
7. GLRA4 ENSGALG00000004936 23 1.854 - - - - - 0.854 1.000 - - - glycine receptor alpha 4 [Source:HGNC Symbol;Acc:HGNC:31715]
8. LOC100859020 ENSGALG00000027645 1 1.854 - - 0.854 - - 1.000 - - - - rab9 effector protein with kelch motifs-like, transcript variant X3
9. TTC29 ENSGALG00000010009 4 1.828 - - - - 0.860 - - 0.968 - - tetratricopeptide repeat domain 29 [Source:HGNC Symbol;Acc:HGNC:29936]
10. TSNAXIP1 ENSGALG00000001533 9 1.765 - - - 0.765 - 1.000 - - - - translin associated factor X interacting protein 1, transcript variant X2
11. K123 ENSGALG00000041978 16 1 - - - - - - 1.000 - - - K123 protein [Source:NCBI gene;Acc:395873]
12. TNN ENSGALG00000004538 21 1 - - - - - - 1.000 - - - tenascin N [Source:HGNC Symbol;Acc:HGNC:22942]
13. AOX1 ENSGALG00000008185 14 1 - - - - - 1.000 - - - - aldehyde oxidase 1 [Source:NCBI gene;Acc:424071]
14. ZC3H7B ENSGALG00000011965 6 1 - - - - - 1.000 - - - - zinc finger CCCH-type containing 7B [Source:HGNC Symbol;Acc:HGNC:30869]
15. SARM1 ENSGALG00000003595 15 1 - - - 1.000 - - - - - - sterile alpha and TIR motif containing 1 [Source:HGNC Symbol;Acc:HGNC:17074]
16. C22orf23 ENSGALG00000012293 21 1 - - - - - 1.000 - - - - chromosome 22 open reading frame 23 [Source:HGNC Symbol;Acc:HGNC:18589]
17. CCL5 ENSGALG00000043603 10 1 - - - - - - 1.000 - - - chemokine (C-C motif) ligand 5 [Source:NCBI gene;Acc:417465]
18. BCMO1 BCMO1 35 1 - - - - - - 1.000 - - -
19. ETNK2 ENSGALG00000000557 4 1 - - - 1.000 - - - - - - ethanolamine kinase 2 [Source:HGNC Symbol;Acc:HGNC:25575]
20. NOG ENSGALG00000003114 12 1 - - - - - - 1.000 - - - noggin [Source:NCBI gene;Acc:373912]
21. LRFN2 ENSGALG00000010050 28 1 - - - - - - 1.000 - - - leucine rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:HGNC:21226]
22. PKN2 ENSGALG00000006237 37 1 - - - - - - 1.000 - - - protein kinase N2 [Source:HGNC Symbol;Acc:HGNC:9406]
23. DPP10 ENSGALG00000012156 20 1 - - - 1.000 - - - - - - dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
24. ADAMTS18 ENSGALG00000005347 17 1 - - - - - 1.000 - - - - ADAM metallopeptidase with thrombospondin type 1 motif 18 [Source:HGNC Symbol;Acc:HGNC:17110]
25. Mar-04 Mar-04 7 1 - - - - - - 1.000 - - -
26. MC5R ENSGALG00000032087 2 1 - - - - - - 1.000 - - - melanocortin 5 receptor [Source:NCBI gene;Acc:421047]
27. CLRN2 ENSGALG00000027453 3 1 - - - - - - 1.000 - - - clarin 2 [Source:HGNC Symbol;Acc:HGNC:33939]
28. LPAR5 ENSGALG00000014455 10 1 - - - - - - 1.000 - - - lysophosphatidic acid receptor 5 [Source:HGNC Symbol;Acc:HGNC:13307]
29. SLCO2A1 ENSGALG00000006471 18 1 - - - - - - 1.000 - - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
30. RIPPLY1 RIPPLY1 34 1 - - - - - 1.000 - - - -
31. NDEL1 ENSGALG00000001163 16 1 - - - - - - 1.000 - - - Gallus gallus nudE neurodevelopment protein 1-like 1 (NDEL1), mRNA. [Source:RefSeq mRNA;Acc:NM_001030696]
32. SIX4 ENSGALG00000017389 10 1 - - - - - 1.000 - - - - SIX homeobox 4 [Source:HGNC Symbol;Acc:HGNC:10890]
33. FCHSD1 ENSGALG00000002622 6 1 - - - - - 1.000 - - - - FCH and double SH3 domains 1 [Source:HGNC Symbol;Acc:HGNC:25463]
34. ENSGALG00000022751 ENSGALG00000022751 1 1 - - - 1.000 - - - - - -
35. CMBL ENSGALG00000013033 3 1 - - - - - - 1.000 - - - carboxymethylenebutenolidase homolog, transcript variant X4
36. NKAIN4 ENSGALG00000005774 10 1 - - - - - 1.000 - - - - sodium/potassium transporting ATPase interacting 4 [Source:HGNC Symbol;Acc:HGNC:16191]
37. PCYT1B 190 1 - - - - - - 1.000 - - - phosphate cytidylyltransferase 1, choline, beta, transcript variant X4
38. TMTC1 ENSGALG00000012956 160 1 - - - - - - 1.000 - - - transmembrane and tetratricopeptide repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:24099]
39. WNT11B ENSGALG00000004401 0 1 - - - - - 1.000 - - - - wingless-type MMTV integration site family, member 11b [Source:NCBI gene;Acc:100170842]
40. USP49 ENSGALG00000003461 10 1 - - - 1.000 - - - - - - ubiquitin specific peptidase 49 [Source:HGNC Symbol;Acc:HGNC:20078]
41. CSMD3 ENSGALG00000031578 23 1 - - - - - - 1.000 - - - CUB and Sushi multiple domains 3 [Source:HGNC Symbol;Acc:HGNC:19291]
42. JDP2 ENSGALG00000010322 11 1 - - - - - - 1.000 - - - Jun dimerization protein 2 [Source:NCBI gene;Acc:423363]
43. FAM187A ENSGALG00000000918 1 1 - - - 1.000 - - - - - - family with sequence similarity 187 member A, transcript variant X2
44. OBSL1 ENSGALG00000011242 22 1 - - - - - - 1.000 - - - obscurin like 1 [Source:HGNC Symbol;Acc:HGNC:29092]
45. PTBP3 ENSGALG00000015669 16 1 - - - 1.000 - - - - - - polypyrimidine tract binding protein 3 [Source:HGNC Symbol;Acc:HGNC:10253]
46. BHLHE23 ENSGALG00000005718 0 1 - - - - - 1.000 - - - - basic helix-loop-helix family member e23 [Source:NCBI gene;Acc:395165]
47. SESN3 ENSGALG00000017204 7 1 - - - - - - 1.000 - - - sestrin 3, transcript variant X2
48. AJAP1 ENSGALG00000027265 11 1 - - - - - - 1.000 - - - adherens junctions associated protein 1 [Source:HGNC Symbol;Acc:HGNC:30801]
49. ADAM20 ENSGALG00000013838, ENSGALG00000021341 5 1 - - - - - 1.000 - - - - ADAM metallopeptidase domain 20 [Source:HGNC Symbol;Acc:HGNC:199]
50. CACNG3 ENSGALG00000038087 12 1 - - - 1.000 - - - - - - calcium voltage-gated channel auxiliary subunit gamma 3 [Source:NCBI gene;Acc:395378]
51. ENSGALG00000026637 ENSGALG00000026637 12 1 - - - - - - 1.000 - - -
52. ZHX1 ENSGALG00000034999 21 1 - - - - - - 1.000 - - - zinc fingers and homeoboxes 1 [Source:HGNC Symbol;Acc:HGNC:12871]
53. TIMP2 ENSGALG00000027070 33 1 - - - - - - 1.000 - - - TIMP metallopeptidase inhibitor 2 [Source:NCBI gene;Acc:374178]
54. ENSGALG00000024063 ENSGALG00000024063 0 1 - - - - - 1.000 - - - -
55. CAD19 CAD19 17 1 - - - 1.000 - - - - - -
56. RCOR1 ENSGALG00000011384 22 1 - - - - - - 1.000 - - - REST corepressor 1 [Source:HGNC Symbol;Acc:HGNC:17441]
57. DSG1 ENSGALG00000017398 1 1 - - - - - 1.000 - - - - desmoglein 1 [Source:HGNC Symbol;Acc:HGNC:3048]
58. ZBTB21 ENSGALG00000016147 13 1 - - - 1.000 - - - - - - zinc finger and BTB domain containing 21 [Source:HGNC Symbol;Acc:HGNC:13083]
59. LAMP3 ENSGALG00000008759 2 1 - - - 1.000 - - - - - - lysosomal associated membrane protein 3 [Source:NCBI gene;Acc:424961]
60. MEGF9 3 1 - - - - - 1.000 - - - - multiple EGF-like-domains 9
61. GRAP ENSGALG00000005094 0 1 - - - - - 1.000 - - - - GRB2 related adaptor protein [Source:NCBI gene;Acc:416523]
62. Metazoa Metazoa 5 1 - - - 1.000 - - - - - -
63. ROS1 ENSGALG00000014913 7 1 - - - - - - 1.000 - - - ROS proto-oncogene 1, receptor tyrosine kinase [Source:NCBI gene;Acc:396192]
64. SNX13 ENSGALG00000010840 13 1 - - - - - - 1.000 - - - sorting nexin 13 [Source:NCBI gene;Acc:420598]
65. THRSP ENSGALG00000035803 2 1 - - - - - 1.000 - - - - thyroid hormone responsive [Source:NCBI gene;Acc:404755]
66. SUFU ENSGALG00000008096 307 1 - - - - - - 1.000 - - - SUFU negative regulator of hedgehog signaling [Source:NCBI gene;Acc:374118]
67. ENSGALG00000010222 ENSGALG00000010222 4 1 - - - - - 1.000 - - - -
68. CNDP1 ENSGALG00000013697 7 1 - - - - - - 1.000 - - - carnosine dipeptidase 1 [Source:HGNC Symbol;Acc:HGNC:20675]
69. ARHGDIG ENSGALG00000036819 18 1 - - - - - - 1.000 - - - Rho GDP dissociation inhibitor gamma [Source:HGNC Symbol;Acc:HGNC:680]
70. C2orf71 1 1 - - - 1.000 - - - - - - chromosome 2 open reading frame 71
71. TRIM66 ENSGALG00000005958 5 1 - - - 1.000 - - - - - - tripartite motif containing 66 [Source:HGNC Symbol;Acc:HGNC:29005]
72. SLC36A4 ENSGALG00000017227 3 1 - - - - - 1.000 - - - - solute carrier family 36 member 4 [Source:HGNC Symbol;Acc:HGNC:19660]
73. NTRK3 ENSGALG00000040241 3 1 - - - - - 1.000 - - - - neurotrophic receptor tyrosine kinase 3 [Source:NCBI gene;Acc:396081]
74. MMP9 ENSGALG00000006992 78 1 - - - - - - 1.000 - - - matrix metallopeptidase 9 [Source:NCBI gene;Acc:395387]
75. ENSGALG00000027796 ENSGALG00000027796 7 1 - - - - - - 1.000 - - -
76. SYT10 ENSGALG00000012911 17 1 - - - - - 1.000 - - - - synaptotagmin 10 [Source:HGNC Symbol;Acc:HGNC:19266]
77. ASL1 ENSGALG00000002558 78 1 - - - - - 1.000 - - - - argininosuccinate lyase 1 [Source:NCBI gene;Acc:396498]
78. KCNAB1 5 1 - - - - - 1.000 - - - - potassium voltage-gated channel subfamily A member regulatory beta subunit 1, transcript variant X1
79. GRIN2A ENSGALG00000007278 17 1 - - - - - 1.000 - - - - glutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]
80. TNFRSF9 9 1 - - - - - - 1.000 - - - tumor necrosis factor receptor superfamily member 9
81. B4GALT2 ENSGALG00000010094 36 1 - - - 1.000 - - - - - - beta-1,4-galactosyltransferase 2 [Source:NCBI gene;Acc:396122]
82. MOG ENSGALG00000022875 9 1 - - - - - 1.000 - - - - myelin oligodendrocyte glycoprotein, transcript variant X50
83. LOC100858814 ENSGALG00000028210 3 1 - - - 1.000 - - - - - - adenine phosphoribosyltransferase-like, transcript variant X1
84. SEC14L3 ENSGALG00000007840 2 1 - - - - - 1.000 - - - - SEC14 like lipid binding 3, transcript variant X2
85. CA8 ENSGALG00000039145 109 1 - - - - - - 1.000 - - - carbonic anhydrase 8 [Source:HGNC Symbol;Acc:HGNC:1382]
86. ENSGALG00000027018 ENSGALG00000027018 12 1 - - - - - 1.000 - - - -
87. ENSGALG00000014107 ENSGALG00000014107 6 1 - - - - - 1.000 - - - -
88. SORCS2 ENSGALG00000015554 7 1 - - - - - - 1.000 - - - sortilin related VPS10 domain containing receptor 2 [Source:HGNC Symbol;Acc:HGNC:16698]
89. STARD10 ENSGALG00000002577 245 1 - - - - - - 1.000 - - - StAR related lipid transfer domain containing 10
90. FAM208B 24 1 - - - - - - 1.000 - - - family with sequence similarity 208 member B, transcript variant X3
91. CRHBP ENSGALG00000014994 8 1 - - - - - 1.000 - - - - corticotropin releasing hormone binding protein [Source:HGNC Symbol;Acc:HGNC:2356]
92. ABCG4 ENSGALG00000006795 1 1 - - - - - 1.000 - - - - ATP binding cassette subfamily G member 4 [Source:HGNC Symbol;Acc:HGNC:13884]
93. FMO3 ENSGALG00000040573 26 1 - - - - - 1.000 - - - - flavin containing monooxygenase 3 [Source:NCBI gene;Acc:395267]
94. ACKR4 ENSGALG00000041491 7 1 - - - - - 1.000 - - - - atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]
95. COL25A1 ENSGALG00000039411 5 1 - - - - - - 1.000 - - - collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]
96. gga-mir-92 gga-mir-92 0 1 - - - - - 1.000 - - - -
97. CDCP2 ENSGALG00000010752 4 1 - - - 1.000 - - - - - - CUB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:27297]
98. F7 ENSGALG00000016833 4 1 - - - - - 1.000 - - - - coagulation factor VII [Source:NCBI gene;Acc:395086]
99. MBL2 ENSGALG00000002507 17 1 - - - 1.000 - - - - - - mannose binding lectin 2 [Source:NCBI gene;Acc:374267]
100. C1orf168 C1orf168 98 1 - - - - - - 1.000 - - -

There are 260 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA