Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for U4atac

Gene Name Gene ID Reads Annotation
U4atac U4atac 23











Genes with expression patterns similar to U4atac

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. U4atac U4atac 23 5 - - 1.000 1.000 1.000 1.000 - - - 1.000
2. LRRC47 7 1.858 - - 0.858 - - 1.000 - - - - leucine rich repeat containing 47
3. TIMD4 ENSGALG00000003876 61 1.838 - - - - 0.932 0.906 - - - - T-cell immunoglobulin and mucin domain containing 4 [Source:NCBI gene;Acc:416250]
4. SERAC1 ENSGALG00000013732 24 1.706 - - 0.961 - - 0.745 - - - - serine active site containing 1 [Source:HGNC Symbol;Acc:HGNC:21061]
5. BEGAIN ENSGALG00000011236 35 1 - - - - - 1.000 - - - - brain enriched guanylate kinase associated [Source:HGNC Symbol;Acc:HGNC:24163]
6. GHSR ENSGALG00000027947 24 1 - - - - - 1.000 - - - - growth hormone secretagogue receptor [Source:NCBI gene;Acc:378911]
7. TEX33 ENSGALG00000012490 11 1 - - - - 1.000 - - - - - testis expressed 33, transcript variant X2
8. ENSGALG00000009227 ENSGALG00000009227 2 1 - - - - - 1.000 - - - -
9. FTO ENSGALG00000041036 11 1 - - - - 1.000 - - - - - FTO, alpha-ketoglutarate dependent dioxygenase [Source:NCBI gene;Acc:415718]
10. PET112 PET112 38 1 - - - - 1.000 - - - - -
11. CLDN1 ENSGALG00000026862 28 1 - - - - 1.000 - - - - - claudin 1 [Source:NCBI gene;Acc:424910]
12. C3orf58 ENSGALG00000002347 27 1 - - - - 1.000 - - - - - chromosome 3 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:28490]
13. SUSD4 ENSGALG00000009388 48 1 - - - - - 1.000 - - - - sushi domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25470]
14. NLGN3 ENSGALG00000005553 4 1 - - - - - 1.000 - - - - neuroligin 3 [Source:NCBI gene;Acc:770104]
15. ENSGALG00000020459 ENSGALG00000020459 3 1 - - - - - 1.000 - - - -
16. SLC24A1 ENSGALG00000007495 3 1 - - - - - 1.000 - - - - solute carrier family 24 member 1 [Source:NCBI gene;Acc:414892]
17. ENSGALG00000016257 ENSGALG00000016257 4 1 - - - - - 1.000 - - - -
18. ATP12A ENSGALG00000006469 7 1 - - - - - 1.000 - - - - ATPase H+/K+ transporting non-gastric alpha2 subunit [Source:NCBI gene;Acc:419743]
19. GPR6 ENSGALG00000015068 2 1 - - - - - 1.000 - - - - G protein-coupled receptor 6 [Source:HGNC Symbol;Acc:HGNC:4515]
20. ENSGALG00000017269 ENSGALG00000017269 13 1 - - - - - 1.000 - - - -
21. GLYCTK ENSGALG00000004018 5 1 - - - - 1.000 - - - - - glycerate kinase [Source:HGNC Symbol;Acc:HGNC:24247]
22. OCM ENSGALG00000003462 6 1 - - - - - 1.000 - - - - oncomodulin [Source:NCBI gene;Acc:386586]
23. POMT1 ENSGALG00000003757 38 1 - - - - - 1.000 - - - - protein O-mannosyltransferase 1 [Source:NCBI gene;Acc:417175]
24. ENSGALG00000025883 ENSGALG00000025883 6 1 - - - - - 1.000 - - - -
25. GPR103 GPR103 18 1 - - - - 1.000 - - - - -
26. OVCH2 ENSGALG00000005318 8 1 - - - - - 1.000 - - - - ovochymase 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:29970]
27. VIT ENSGALG00000010583 16 1 - - - - 1.000 - - - - - vitrin [Source:NCBI gene;Acc:421471]
28. C16orf11 C16orf11 2 1 - - - - - 1.000 - - - -
29. NIPA1 ENSGALG00000039811 20 0.999 - - - - - 0.999 - - - - NIPA magnesium transporter 1 [Source:HGNC Symbol;Acc:HGNC:17043]
30. OR14I1 OR14I1 14 0.999 - - - - - 0.999 - - - -
31. CAPN6 ENSGALG00000008006 16 0.998 - - - - - 0.998 - - - - calpain 6 [Source:HGNC Symbol;Acc:HGNC:1483]
32. WNT3 ENSGALG00000001079 8 0.997 - - - - 0.997 - - - - - Wnt family member 3 [Source:NCBI gene;Acc:374142]
33. ZNF22 ZNF22 25 0.992 - - - - - 0.992 - - - -
34. ENSGALG00000023463 ENSGALG00000023463 2 0.99 - - - - - 0.990 - - - -
35. OSTF1 ENSGALG00000017447 39 0.987 - - - - - 0.987 - - - - osteoclast stimulating factor 1 [Source:NCBI gene;Acc:427258]
36. DAZL ENSGALG00000011243 34 0.987 - - - - 0.987 - - - - - deleted in azoospermia like [Source:NCBI gene;Acc:374054]
37. ENSGALG00000018621 ENSGALG00000018621 8 0.986 - - - - - 0.986 - - - -
38. IL20RA ENSGALG00000013869 15 0.986 - - - - - 0.986 - - - - interleukin 20 receptor subunit alpha [Source:HGNC Symbol;Acc:HGNC:6003]
39. ENSGALG00000028652 ENSGALG00000028652 65 0.979 - - - - 0.979 - - - - -
40. GAN ENSGALG00000013437 11 0.978 - - 0.978 - - - - - - - gigaxonin [Source:HGNC Symbol;Acc:HGNC:4137]
41. GPD1L2 ENSGALG00000012061 31 0.978 - - 0.978 - - - - - - - glycerol-3-phosphate dehydrogenase 1-like 2
42. ENSGALG00000026347 ENSGALG00000026347 2 0.978 - - 0.978 - - - - - - -
43. LRP3 ENSGALG00000004853 13 0.978 - - 0.978 - - - - - - - LDL receptor related protein 3 [Source:HGNC Symbol;Acc:HGNC:6695]
44. CNGA2 ENSGALG00000007282 2 0.978 - - 0.978 - - - - - - - cyclic nucleotide gated channel alpha 2 [Source:HGNC Symbol;Acc:HGNC:2149]
45. TLL2 ENSGALG00000005519 10 0.978 - - 0.978 - - - - - - - tolloid like 2 [Source:HGNC Symbol;Acc:HGNC:11844]
46. FHL2 ENSGALG00000016797 11 0.978 - - 0.978 - - - - - - - four and a half LIM domains 2 [Source:HGNC Symbol;Acc:HGNC:3703]
47. SNX8 ENSGALG00000004255 4 0.978 - - 0.978 - - - - - - - sorting nexin 8 [Source:HGNC Symbol;Acc:HGNC:14972]
48. ZMAT4 ENSGALG00000003470 2 0.978 - - 0.978 - - - - - - - zinc finger matrin-type 4 [Source:HGNC Symbol;Acc:HGNC:25844]
49. POMGNT2 ENSGALG00000011518 36 0.978 - - 0.978 - - - - - - - protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) [Source:NCBI gene;Acc:428446]
50. CLRN2 ENSGALG00000027453 3 0.978 - - 0.978 - - - - - - - clarin 2 [Source:HGNC Symbol;Acc:HGNC:33939]
51. LOXHD1 ENSGALG00000037829 3 0.978 - - 0.978 - - - - - - - lipoxygenase homology domains 1 [Source:HGNC Symbol;Acc:HGNC:26521]
52. TNFAIP3 ENSGALG00000013861 11 0.978 - - 0.978 - - - - - - - TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]
53. ENSGALG00000009041 ENSGALG00000009041 27 0.978 - - 0.978 - - - - - - -
54. GNAI1 ENSGALG00000008382 195 0.976 - - - - - 0.976 - - - - G protein subunit alpha i1 [Source:NCBI gene;Acc:396368]
55. MDM4 ENSGALG00000000636 91 0.975 - - - - - 0.975 - - - - MDM4, p53 regulator [Source:HGNC Symbol;Acc:HGNC:6974]
56. TRPC6 ENSGALG00000029416 281 0.973 - - - - - 0.973 - - - - transient receptor potential cation channel subfamily C member 6 [Source:HGNC Symbol;Acc:HGNC:12338]
57. LRRC49 ENSGALG00000004059 29 0.973 - - 0.973 - - - - - - - leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:HGNC:25965]
58. CHRNA3 ENSGALG00000003014 6 0.972 - - - - - 0.972 - - - - cholinergic receptor nicotinic alpha 3 subunit [Source:NCBI gene;Acc:386578]
59. NUDT2 ENSGALG00000027295 15 0.971 - - - - - 0.971 - - - - nudix hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:8049]
60. PLXNC1 ENSGALG00000011309 69 0.968 - - - - 0.968 - - - - - plexin C1 [Source:HGNC Symbol;Acc:HGNC:9106]
61. PDGFRL ENSGALG00000013617 11 0.967 - - - - - 0.967 - - - - platelet derived growth factor receptor like [Source:HGNC Symbol;Acc:HGNC:8805]
62. ZP2 ENSGALG00000002428 10 0.966 - - - - 0.966 - - - - - zona pellucida glycoprotein 2 [Source:NCBI gene;Acc:427006]
63. UBE2L6 ENSGALG00000046098 393 0.964 - - - - - 0.964 - - - - ubiquitin-conjugating enzyme E2L 6, transcript variant X3
64. PIGM ENSGALG00000010768 41 0.962 - - - - - 0.962 - - - - phosphatidylinositol glycan anchor biosynthesis class M [Source:NCBI gene;Acc:428583]
65. SYCP1 ENSGALG00000002511 13 0.962 - - 0.962 - - - - - - - synaptonemal complex protein 1 [Source:HGNC Symbol;Acc:HGNC:11487]
66. SLC17A6 ENSGALG00000039254 16 0.961 - - 0.961 - - - - - - - solute carrier family 17 member 6 [Source:NCBI gene;Acc:422971]
67. PTRF 7 0.96 - - - - - 0.960 - - - - polymerase I and transcript release factor
68. HOXB13 ENSGALG00000033154 71 0.959 - - 0.959 - - - - - - - homeobox B13 [Source:HGNC Symbol;Acc:HGNC:5112]
69. C2CD3 ENSGALG00000017314 13 0.955 - - - - - 0.955 - - - - C2 calcium dependent domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24564]
70. JADE3 ENSGALG00000016727 55 0.953 - - - - - 0.953 - - - - jade family PHD finger 3 [Source:HGNC Symbol;Acc:HGNC:22982]
71. SLC20A1 ENSGALG00000013740 40 0.953 - - - - - 0.953 - - - - solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]
72. SLAMF8 ENSGALG00000027712 39 0.951 - - - - - 0.951 - - - - SLAM family member 8 [Source:NCBI gene;Acc:768588]
73. NIPAL4 ENSGALG00000039687 29 0.951 - - - - 0.951 - - - - - NIPA like domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28018]
74. CALR3 ENSGALG00000003914 8 0.946 - - 0.946 - - - - - - - calreticulin 3 [Source:HGNC Symbol;Acc:HGNC:20407]
75. SLC35A5 11 0.943 - - - - - 0.943 - - - - solute carrier family 35 member A5, transcript variant X6
76. LRRIQ1 147 0.941 - - - - - 0.941 - - - - leucine rich repeats and IQ motif containing 1, transcript variant X2
77. BSDC1 ENSGALG00000003405 3701 0.94 - - - - - 0.940 - - - - BSD domain containing 1 [Source:NCBI gene;Acc:419658]
78. MOGAT2 ENSGALG00000014170 10 0.94 - - - - - 0.940 - - - - monoacylglycerol O-acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:23248]
79. B4GALNT3 ENSGALG00000012988 12 0.939 - - 0.939 - - - - - - - beta-1,4-N-acetyl-galactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:24137]
80. TRPM1 ENSGALG00000003849 5 0.939 - - 0.939 - - - - - - - transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146]
81. SLC35A3 12 0.939 - - 0.939 - - - - - - - solute carrier family 35 member A3, transcript variant X7
82. ENSGALG00000001323 ENSGALG00000001323 3 0.939 - - 0.939 - - - - - - -
83. HACL1 ENSGALG00000011211 51 0.938 - - - - - 0.938 - - - - 2-hydroxyacyl-CoA lyase 1 [Source:NCBI gene;Acc:420638]
84. RREB1 ENSGALG00000012799 125 0.937 - - - - 0.937 - - - - - ras responsive element binding protein 1 [Source:NCBI gene;Acc:395920]
85. TNPO1 ENSGALG00000015014 57 0.934 - - 0.934 - - - - - - - transportin 1 [Source:HGNC Symbol;Acc:HGNC:6401]
86. DYNC2LI1 ENSGALG00000009954 38 0.934 - - - - - 0.934 - - - - dynein cytoplasmic 2 light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:24595]
87. GPR85 ENSGALG00000009439 23 0.934 - - - - 0.934 - - - - - G protein-coupled receptor 85 [Source:HGNC Symbol;Acc:HGNC:4536]
88. SNX18 ENSGALG00000014914 7 0.931 - - 0.931 - - - - - - - sorting nexin 18 [Source:HGNC Symbol;Acc:HGNC:19245]
89. PLEKHJ1 ENSGALG00000000835 55 0.929 - - - - - 0.929 - - - - pleckstrin homology domain containing J1 [Source:NCBI gene;Acc:428324]
90. GCM2 ENSGALG00000012768 6 0.927 - - 0.927 - - - - - - - glial cells missing homolog 2 [Source:NCBI gene;Acc:428478]
91. WDR78 ENSGALG00000045792 6 0.926 - - - - - 0.926 - - - - WD repeat domain 78 [Source:HGNC Symbol;Acc:HGNC:26252]
92. TACR3 ENSGALG00000010596 31 0.923 - - - - - 0.923 - - - - Gallus gallus tachykinin receptor 3 (TACR3), mRNA. [Source:RefSeq mRNA;Acc:NM_001318454]
93. ENSGALG00000019430 ENSGALG00000019430 32 0.919 - - - - 0.919 - - - - -
94. EVC2 ENSGALG00000015029 51 0.916 - - - - 0.916 - - - - - EvC ciliary complex subunit 2 [Source:NCBI gene;Acc:770095]
95. RC3H2 ENSGALG00000001253 18 0.916 - - - - - 0.916 - - - - ring finger and CCCH-type domains 2 [Source:HGNC Symbol;Acc:HGNC:21461]
96. GLP2R ENSGALG00000041800 10 0.912 - - - - - 0.912 - - - - glucagon-like peptide 2 receptor [Source:NCBI gene;Acc:427787]
97. C1QB ENSGALG00000004771 368 0.911 - - - - 0.911 - - - - - complement C1q B chain [Source:HGNC Symbol;Acc:HGNC:1242]
98. DCUN1D3 ENSGALG00000002267 6 0.91 - - 0.910 - - - - - - - defective in cullin neddylation 1 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28734]
99. MGAT4C ENSGALG00000000225, ENSGALG00000028360 358 0.909 - - - - - 0.909 - - - - MGAT4 family member C [Source:HGNC Symbol;Acc:HGNC:30871]
100. PLXNB1 23 0.909 - - 0.909 - - - - - - - plexin B1, transcript variant X2

There are 249 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA