Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for U4_1

Gene Name Gene ID Reads Annotation
U4_1 U4_1 2










Genes with expression patterns similar to U4_1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. U4_1 U4_1 2 5 - - 1.000 - 1.000 - 1.000 1.000 1.000
2. znf536 ENSDARG00000103648 6 2 - - - - 1.000 - 1.000 - - zinc finger protein 536 [Source:ZFIN;Acc:ZDB-GENE-030616-624]
3. fam19a1 7 2 - - - - 1.000 - - - 1.000 family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
4. ZSWIM2 ENSDARG00000075700 8 2 - - - - 1.000 - 1.000 - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
5. nog3 ENSDARG00000053528, ENSDARG00000116141, ENSDARG00000116361 1 2 - - 1.000 - - - - - 1.000 noggin 3 [Source:ZFIN;Acc:ZDB-GENE-990714-8]
6. sh2d4b sh2d4b 1 2 - - 1.000 - - - - - 1.000
7. BEGAIN_1 BEGAIN_1 7 2 - - 1.000 - 1.000 - - - -
8. si:dkeyp-68a7.5 si:dkeyp-68a7.5 6 2 - - 1.000 - - - - - 1.000
9. STRC ENSDARG00000105391 10 1.97 - - 1.000 - - - - - 0.970 stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
10. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1.889 - - 0.889 - - - - - 1.000 solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
11. foxa_1 ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 1 1.839 - - - - 1.000 - - 0.839 - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
12. nptx2b ENSDARG00000045164 5 1.837 - - - - 1.000 - - - 0.837 neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
13. pou4f3 ENSDARG00000006206 8 1.821 - - 1.000 - - - - - 0.821 POU class 4 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-24]
14. si:dkey-4c15.9 ENSDARG00000092152 1 1.805 - - - - 1.000 - - - 0.805 si:dkey-4c15.9 [Source:ZFIN;Acc:ZDB-GENE-050420-80]
15. CR382327.1 ENSDARG00000088739 56 1.801 - - - - - - 1.000 - 0.801
16. si:dkey-30c15.12 ENSDARG00000058546 12 1.751 - - 0.751 - - - - - 1.000 si:dkey-30c15.12 [Source:ZFIN;Acc:ZDB-GENE-060503-920]
17. CD109 ENSDARG00000060609 34 1.728 - - 0.904 - - - 0.824 - - CD109 molecule [Source:ZFIN;Acc:ZDB-GENE-120215-253]
18. trh ENSDARG00000006868 31 1.716 - - 0.950 - - - 0.766 - - thyrotropin-releasing hormone [Source:ZFIN;Acc:ZDB-GENE-020930-1]
19. CR352265.1 ENSDARG00000062758 39 1.695 - - 0.917 - - - - - 0.778
20. BX927317.2 ENSDARG00000101263 4 1 - - - - 1.000 - - - -
21. ZCCHC6 2 1 - - - - 1.000 - - - - zinc finger, CCHC domain containing 6
22. BX571760.2 BX571760.2 1 1 - - - - 1.000 - - - -
23. tyro3 ENSDARG00000005356 4 1 - - 1.000 - - - - - - TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
24. si:dkeyp-34c12.1 ENSDARG00000071083, ENSDARG00000113229 6 1 - - 1.000 - - - - - - si:dkeyp-34c12.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5347]
25. si:dkey-92j16.1 si:dkey-92j16.1 1 1 - - - - 1.000 - - - -
26. GPC5 GPC5 11 1 - - - - - - 1.000 - -
27. XRCC2 ENSDARG00000013933 15 1 - - - - - - - - 1.000 X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
28. CABZ01087111.1 CABZ01087111.1 42 1 - - 1.000 - - - - - -
29. kif17 ENSDARG00000055238 12 1 - - - - - - 1.000 - - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
30. si:ch73-27e22.2 ENSDARG00000092266 8 1 - - - - - - - - 1.000 si:ch73-27e22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-230]
31. PDE9A ENSDARG00000060280 58 1 - - - - - - 1.000 - - phosphodiesterase 9A [Source:ZFIN;Acc:ZDB-GENE-130920-1]
32. b3gnt9 ENSDARG00000041616 0 1 - - 1.000 - - - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 [Source:ZFIN;Acc:ZDB-GENE-060503-611]
33. cacna1aa ENSDARG00000037905 4 1 - - - - 1.000 - - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
34. CR812472.3 ENSDARG00000109834 0 1 - - - - - - - - 1.000 platelet-derived growth factor beta polypeptide b [Source:NCBI gene;Acc:796490]
35. U1_7 U1_7 0 1 - - 1.000 - - - - - -
36. ENSDARG00000092956 ENSDARG00000092956 1 1 - - - - - - 1.000 - -
37. si:dkey-85n7.7 ENSDARG00000095893 0 1 - - - - 1.000 - - - - si:dkey-85n7.7 [Source:ZFIN;Acc:ZDB-GENE-110408-52]
38. plekha7b ENSDARG00000062220, ENSDARG00000110462 11 1 - - 1.000 - - - - - - pleckstrin homology domain containing, family A member 7b [Source:ZFIN;Acc:ZDB-GENE-091014-2]
39. CR855307.2 CR855307.2 1 1 - - 1.000 - - - - - -
40. zgc:194189 ENSDARG00000008010 26 1 - - - - 1.000 - - - - zgc:194189 [Source:ZFIN;Acc:ZDB-GENE-081022-71]
41. lipt2 ENSDARG00000069852 14 1 - - - - 1.000 - - - - lipoyl(octanoyl) transferase 2 [Source:ZFIN;Acc:ZDB-GENE-060312-18]
42. abcc13 ENSDARG00000062519 2 1 - - - - 1.000 - - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 13 [Source:ZFIN;Acc:ZDB-GENE-050517-26]
43. wu:fb37b09 wu:fb37b09 10685 1 - - - - - - 1.000 - -
44. hsf5 ENSDARG00000104686 9 1 - - 1.000 - - - - - - heat shock transcription factor family member 5 [Source:ZFIN;Acc:ZDB-GENE-070410-42]
45. CABZ01112049.1 ENSDARG00000098538 0 1 - - - - 1.000 - - - - intestinal mucin-like protein [Source:NCBI gene;Acc:100332723]
46. si:dkey-14a7.4 si:dkey-14a7.4 5 1 - - - - 1.000 - - - -
47. zgc:162322 zgc:162322 1 1 - - 1.000 - - - - - -
48. ZNF70_7 ZNF70_7 0 1 - - 1.000 - - - - - -
49. si:ch211-210g13.5 ENSDARG00000062575 1 1 - - - - 1.000 - - - - si:ch211-210g13.5 [Source:ZFIN;Acc:ZDB-GENE-030131-5675]
50. pappab ENSDARG00000059858 11 1 - - - - - - 1.000 - - pregnancy-associated plasma protein A, pappalysin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-71]
51. SNORA53 SNORA53 10 1 - - 1.000 - - - - - -
52. CR356247.1 CR356247.1 2 1 - - 1.000 - - - - - -
53. si:dkey-285e18.5 ENSDARG00000093665 5 1 - - - - 1.000 - - - - si:dkey-285e18.5 [Source:ZFIN;Acc:ZDB-GENE-120703-44]
54. sst3 61 1 - - - - - - 1.000 - - somatostatin 3
55. si:ch211-285c6.2 ENSDARG00000079234 1 1 - - 1.000 - - - - - - si:ch211-285c6.2 [Source:ZFIN;Acc:ZDB-GENE-040724-168]
56. si:dkey-211e20.3 si:dkey-211e20.3 1 1 - - 1.000 - - - - - -
57. slc2a11l ENSDARG00000062873 1 1 - - 1.000 - - - - - - solute carrier family 2 (facilitated glucose transporter), member 11-like [Source:ZFIN;Acc:ZDB-GENE-061215-118]
58. rap2ab ENSDARG00000040246 63 1 - - - - - - 1.000 - - RAP2A, member of RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-090312-116]
59. tirap ENSDARG00000074371 10 1 - - - - - - - - 1.000 toll-interleukin 1 receptor (TIR) domain containing adaptor protein [Source:ZFIN;Acc:ZDB-GENE-040219-4]
60. RBM11 ENSDARG00000090202 15 1 - - - - 1.000 - - - - RNA binding motif protein 11 [Source:ZFIN;Acc:ZDB-GENE-091204-317]
61. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1 - - - - - - 1.000 - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
62. taf4b ENSDARG00000075732 3 1 - - - - 1.000 - - - - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
63. si:ch73-366i20.1_1 ENSDARG00000092949 1 1 - - - - 1.000 - - - - si:ch73-366i20.1 [Source:ZFIN;Acc:ZDB-GENE-070912-338]
64. pax4 ENSDARG00000021336 29 1 - - - - - - 1.000 - - paired box 4 [Source:ZFIN;Acc:ZDB-GENE-041210-244]
65. si:ch211-145h19.2 7 1 - - - - - - - - 1.000 si:ch211-145h19.2
66. SBSPON ENSDARG00000110160 2 1 - - - - - - - - 1.000 somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
67. adamtsl2 ENSDARG00000074033 0 1 - - - - - - - - 1.000 ADAMTS-like 2 [Source:ZFIN;Acc:ZDB-GENE-070705-558]
68. znf423 ENSDARG00000095732 13 1 - - - - - - 1.000 - - zinc finger protein 423 [Source:ZFIN;Acc:ZDB-GENE-030131-4368]
69. KSR1_1 KSR1_1 1 1 - - - - - - 1.000 - -
70. csrnp1b ENSDARG00000038429 10 1 - - - - 1.000 - - - - cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]
71. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - 1.000 - - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
72. si:ch211-161m3.4 ENSDARG00000103375 10 1 - - - - 1.000 - - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
73. cd74b ENSDARG00000036628 8 1 - - - - - - 1.000 - - CD74 molecule, major histocompatibility complex, class II invariant chain b [Source:ZFIN;Acc:ZDB-GENE-990910-10]
74. si:ch211-106n13.3 ENSDARG00000052633 3 1 - - - - - - 1.000 - - si:ch211-106n13.3 [Source:ZFIN;Acc:ZDB-GENE-030131-9088]
75. fam131ba ENSDARG00000070952 26 1 - - - - 1.000 - - - - family with sequence similarity 131, member Ba [Source:ZFIN;Acc:ZDB-GENE-060503-616]
76. si:ch211-269m17.1 si:ch211-269m17.1 1 1 - - - - - - - - 1.000
77. ppp4r1 ENSDARG00000101316 1 1 - - - - - - - - 1.000 protein phosphatase 4, regulatory subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-753]
78. zgc:110353 ENSDARG00000039443 80 1 - - - - - - 1.000 - - zgc:110353 [Source:ZFIN;Acc:ZDB-GENE-050417-310]
79. gabra3 ENSDARG00000090883 0 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
80. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 - - 1.000 - - - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
81. CABZ01089223.1 CABZ01089223.1 0 1 - - - - 1.000 - - - -
82. CABZ01090980.1 CABZ01090980.1 6 1 - - - - 1.000 - - - -
83. mink1 ENSDARG00000035360, ENSDARG00000112785 13 1 - - - - - - 1.000 - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
84. FYB FYB 3 1 - - - - - - 1.000 - -
85. gata2b ENSDARG00000009094 16 1 - - 1.000 - - - - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
86. si:ch211-113a14.26_4 31 1 - - - - - - 1.000 - - si:ch211-113a14.26
87. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 - - 1.000 - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
88. ubb ENSDARG00000093313, ENSDARG00000112953 4 1 - - - - 1.000 - - - - ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
89. SLC4A3 ENSDARG00000104005 2 1 - - 1.000 - - - - - - solute carrier family 4 (anion exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-141006-1]
90. cdc42ep2 ENSDARG00000053959 32 1 - - - - - - 1.000 - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
91. si:dkey-233e3.5 si:dkey-233e3.5 7 1 - - - - 1.000 - - - -
92. csf3r ENSDARG00000045959 4 1 - - 1.000 - - - - - - colony stimulating factor 3 receptor (granulocyte) [Source:ZFIN;Acc:ZDB-GENE-080104-4]
93. si:ch211-255l14.3 si:ch211-255l14.3 2 1 - - - - - - 1.000 - -
94. CT573468.1 CT573468.1 283 1 - - - - - - - - 1.000
95. si:dkey-30c15.9 si:dkey-30c15.9 4 1 - - - - - - 1.000 - -
96. CT027705.3 CT027705.3 9 1 - - - - 1.000 - - - -
97. si:dkey-57i11.4 si:dkey-57i11.4 0 1 - - - - 1.000 - - - -
98. prnpb ENSDARG00000044048, ENSDARG00000115858 9 1 - - - - - - 1.000 - - prion protein b [Source:ZFIN;Acc:ZDB-GENE-041221-2]
99. FP016199.1 FP016199.1 43 1 - - - - - - 1.000 - -
100. aasdh ENSDARG00000022730 13 1 - - - - - - 1.000 - - aminoadipate-semialdehyde dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-041210-322]

There are 662 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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