Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for U3_9

Gene Name Gene ID Reads Annotation
U3_9 U3_9 4










Genes with expression patterns similar to U3_9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. U3_9 U3_9 4 2 1.000 - - - 1.000 - - - -
2. si:dkey-52j6.1 si:dkey-52j6.1 3 1 - - - - 1.000 - - - -
3. SLC25A22_1 SLC25A22_1 3 1 - - - - 1.000 - - - -
4. CDHR5 CDHR5 2 1 - - - - 1.000 - - - -
5. XYLT2 ENSDARG00000059557 1 1 - - - - 1.000 - - - - xylosyltransferase II [Source:ZFIN;Acc:ZDB-GENE-081022-125]
6. v2ra17 ENSDARG00000056180 0 1 - - - - 1.000 - - - - vomeronasal 2 receptor, a17 [Source:ZFIN;Acc:ZDB-GENE-050419-130]
7. CU929036.1 CU929036.1 7 1 1.000 - - - - - - - -
8. CU570691.1 ENSDARG00000088908 5 1 - - - - 1.000 - - - -
9. zgc:162235 zgc:162235 9 1 - - - - 1.000 - - - -
10. fam57bb ENSDARG00000074564 2 1 - - - - 1.000 - - - - family with sequence similarity 57, member Bb [Source:ZFIN;Acc:ZDB-GENE-110603-2]
11. myo7bb ENSDARG00000077201 7 1 - - - - 1.000 - - - - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
12. VASP VASP 22 1 1.000 - - - - - - - -
13. CABZ01073085.1 CABZ01073085.1 1 1 - - - - 1.000 - - - -
14. si:dkeyp-123a12.1 si:dkeyp-123a12.1 1 1 - - - - 1.000 - - - -
15. ppid_1 ENSDARG00000038835 4 1 - - - - 1.000 - - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
16. SNORD15_1 SNORD15_1 1 1 - - - - 1.000 - - - -
17. si:ch211-255a21.4 si:ch211-255a21.4 26 1 1.000 - - - - - - - -
18. BAI2 BAI2 0 1 - - - - 1.000 - - - -
19. gngt2a ENSDARG00000010680, ENSDARG00000110351 337 1 1.000 - - - - - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7595]
20. si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 1 - - - - 1.000 - - - - si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]
21. si:dkey-76d18.1 si:dkey-76d18.1 0 1 - - - - 1.000 - - - -
22. aldh9a1a.2 ENSDARG00000055331, ENSDARG00000117162 45 1 1.000 - - - - - - - - aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-081104-507]
23. MYO7B MYO7B 8 1 - - - - 1.000 - - - -
24. si:rp71-18l21.1 si:rp71-18l21.1 2 1 - - - - 1.000 - - - -
25. zgc:113176 ENSDARG00000040487 30 1 - - - - 1.000 - - - - zgc:113176 [Source:ZFIN;Acc:ZDB-GENE-050327-60]
26. CCDC74B CCDC74B 8 1 - - - - 1.000 - - - -
27. ccdc14 ENSDARG00000098734 3 1 - - - - 1.000 - - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
28. si:ch211-217k17.10 ENSDARG00000079345 4 1 - - - - 1.000 - - - - si:ch211-217k17.10 [Source:ZFIN;Acc:ZDB-GENE-030131-8827]
29. CABZ01085394.1 CABZ01085394.1 0 1 - - - - 1.000 - - - -
30. crhb ENSDARG00000027657 9 1 - - - - 1.000 - - - - corticotropin releasing hormone b [Source:ZFIN;Acc:ZDB-GENE-041114-75]
31. mir144 0 1 - - - - 1.000 - - - - microRNA 144
32. ALOX5_1 ALOX5_1 0 1 - - - - 1.000 - - - -
33. CR356247.1 CR356247.1 2 1 - - - - 1.000 - - - -
34. si:dkeyp-46h3.3 ENSDARG00000092887 11 1 - - - - 1.000 - - - - si:dkeyp-46h3.3 [Source:ZFIN;Acc:ZDB-GENE-060503-748]
35. tcf3a ENSDARG00000005915 12 1 - - - - 1.000 - - - - transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-51]
36. CR382281.1 ENSDARG00000100098 135 1 - - - - 1.000 - - - -
37. PDE1C PDE1C 1 1 - - - - 1.000 - - - -
38. oprl1 ENSDARG00000071209 58 1 1.000 - - - - - - - - opiate receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-040312-4]
39. WASF1 ENSDARG00000060349 1 1 - - - - 1.000 - - - - WAS protein family, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-555]
40. si:dkey-111i23.1 ENSDARG00000094811 1 1 - - - - 1.000 - - - - si:dkey-111i23.1 [Source:ZFIN;Acc:ZDB-GENE-070912-351]
41. si:dkey-19h16.7 si:dkey-19h16.7 0 1 - - - - 1.000 - - - -
42. dnajc5b ENSDARG00000058147 6 1 - - - - 1.000 - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
43. INF2 37 1 1.000 - - - - - - - - inverted formin, FH2 and WH2 domain containing
44. si:dkey-14d8.19 si:dkey-14d8.19 12 1 - - - - 1.000 - - - -
45. si:dkey-225k4.1 ENSDARG00000092045 47 1 1.000 - - - - - - - - si:dkey-225k4.1 [Source:ZFIN;Acc:ZDB-GENE-091204-219]
46. ZNF135_2 ZNF135_2 27 1 - - - - 1.000 - - - -
47. si:ch211-153j24.3 ENSDARG00000068428 0 1 - - - - 1.000 - - - - si:ch211-153j24.3 [Source:ZFIN;Acc:ZDB-GENE-041014-38]
48. AFAP1L1 AFAP1L1 1 1 - - - - 1.000 - - - -
49. or111-11 ENSDARG00000041019 5 1 - - - - 1.000 - - - - odorant receptor, family D, subfamily 111, member 11 [Source:ZFIN;Acc:ZDB-GENE-010308-10]
50. BX088718.1 ENSDARG00000101847 3 1 - - - - 1.000 - - - -
51. fancm ENSDARG00000103933 1 1 - - - - 1.000 - - - - FA complementation group M [Source:ZFIN;Acc:ZDB-GENE-090929-1]
52. bik ENSDARG00000045549 18 1 1.000 - - - - - - - - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
53. si:dkey-258f14.3 ENSDARG00000075974 9 1 - - - - 1.000 - - - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
54. lim2.2 ENSDARG00000059015 11 1 - - - - 1.000 - - - - lens intrinsic membrane protein 2.2 [Source:ZFIN;Acc:ZDB-GENE-060124-1]
55. nfil3-4 ENSDARG00000092346 3 1 - - - - 1.000 - - - - nuclear factor, interleukin 3 regulated, member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-214]
56. SLC39A11 ENSDARG00000098194 23 1 1.000 - - - - - - - - solute carrier family 39 member 11 [Source:HGNC Symbol;Acc:HGNC:14463]
57. FCHSD2 FCHSD2 35 1 1.000 - - - - - - - -
58. BX649490.1 ENSDARG00000091718 7 1 - - - - 1.000 - - - - titin-like [Source:NCBI gene;Acc:101883412]
59. CR848664.1 CR848664.1 12 1 - - - - 1.000 - - - -
60. CU655870.1 ENSDARG00000101035 1 1 - - - - 1.000 - - - -
61. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - - - - 1.000 - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
62. si:dkey-228i19.34 si:dkey-228i19.34 43 1 1.000 - - - - - - - -
63. SGPP2 ENSDARG00000079608 1 1 - - - - 1.000 - - - - sphingosine-1-phosphate phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:19953]
64. ampd2 ampd2 6 1 1.000 - - - - - - - -
65. BX469910.2 ENSDARG00000096127 6 1 - - - - 1.000 - - - -
66. zbtb14 ENSDARG00000098273 36 1 1.000 - - - - - - - - zinc finger and BTB domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2946]
67. ARX ARX 71 1 1.000 - - - - - - - -
68. si:ch211-262a22.3 si:ch211-262a22.3 0 1 - - - - 1.000 - - - -
69. taar20b1 ENSDARG00000110415, ENSDARG00000110775, ENSDARG00000112935 1 1 - - - - 1.000 - - - - trace amine associated receptor 20b1 [Source:ZFIN;Acc:ZDB-GENE-060413-5]
70. CABZ01117474.1 CABZ01117474.1 2 1 - - - - 1.000 - - - -
71. SNORD83 SNORD83 43 1 - - - - 1.000 - - - -
72. TTC40 TTC40 1 1 - - - - 1.000 - - - -
73. CABZ01080434.1 ENSDARG00000102438 4 1 - - - - 1.000 - - - -
74. si:dkey-222h21.11 ENSDARG00000092984 13 1 1.000 - - - - - - - - si:dkey-222h21.11 [Source:ZFIN;Acc:ZDB-GENE-081031-32]
75. shank3a ENSDARG00000063332 5 1 - - - - 1.000 - - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
76. si:dkeyp-33e11.1 6 1 - - - - 1.000 - - - - si:dkeyp-33e11.1, transcript variant X3
77. tmem174 ENSDARG00000035388 2 1 - - - - 1.000 - - - - transmembrane protein 174 [Source:ZFIN;Acc:ZDB-GENE-080819-2]
78. hhat ENSDARG00000074428 8 1 - - - - 1.000 - - - - hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
79. BX005356.2 BX005356.2 2 1 - - - - 1.000 - - - -
80. CABZ01073071.2 CABZ01073071.2 0 1 - - - - 1.000 - - - -
81. spata7 ENSDARG00000075898 16 1 - - - - 1.000 - - - - spermatogenesis associated 7 [Source:ZFIN;Acc:ZDB-GENE-050419-61]
82. PTCHD2 PTCHD2 2 1 - - - - 1.000 - - - -
83. si:dkey-20j3.4 si:dkey-20j3.4 4 1 - - - - 1.000 - - - -
84. si:ch211-207e19.15 ENSDARG00000113022 5 1 - - - - 1.000 - - - - si:ch211-207e19.15 [Source:ZFIN;Acc:ZDB-GENE-110914-27]
85. BX323796.1 BX323796.1 2 1 - - - - 1.000 - - - -
86. DTWD2 ENSDARG00000101873 1 1 - - - - 1.000 - - - - DTW domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120215-183]
87. wu:fb63a08 38 1 1.000 - - - - - - - - wu:fb63a08
88. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - - - - 1.000 - - - -
89. CU694320.1 CU694320.1 6 1 - - - - 1.000 - - - -
90. arl8 ENSDARG00000094709 6 1 - - - - 1.000 - - - - ADP-ribosylation factor-like 8 [Source:ZFIN;Acc:ZDB-GENE-030131-5762]
91. CT737190.3 CT737190.3 0 1 - - - - 1.000 - - - -
92. si:dkey-65l23.1 2 1 - - - - 1.000 - - - - si:dkey-65l23.1
93. si:dkey-29b11.3 ENSDARG00000087388 29 1 1.000 - - - - - - - - si:dkey-29b11.3 [Source:ZFIN;Acc:ZDB-GENE-100922-178]
94. CU655969.1 CU655969.1 0 1 - - - - 1.000 - - - -
95. cd226 ENSDARG00000045391 2 1 - - - - 1.000 - - - - CD226 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-1322]
96. BX897720.4 BX897720.4 0 1 - - - - 1.000 - - - -
97. 5S_rRNA_30 5S_rRNA_30 0 1 - - - - 1.000 - - - -
98. fgfr1b ENSDARG00000011190 10 1 1.000 - - - - - - - - fibroblast growth factor receptor 1b [Source:ZFIN;Acc:ZDB-GENE-060503-14]
99. zgc:172271 ENSDARG00000013240 2 1 - - - - 1.000 - - - - zgc:172271 [Source:ZFIN;Acc:ZDB-GENE-080204-110]
100. gnrhr2 ENSDARG00000003553, ENSDARG00000113696 0 1 - - - - 1.000 - - - - gonadotropin releasing hormone receptor 2 [Source:ZFIN;Acc:ZDB-GENE-090128-3]

There are 309 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA