Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for U3_9

Gene Name Gene ID Reads Annotation
U3_9 U3_9 4










Genes with expression patterns similar to U3_9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. U3_9 U3_9 4 2 1.000 - - - 1.000 - - - -
2. CR382281.1 ENSDARG00000100098 135 1 - - - - 1.000 - - - -
3. CABZ01080434.1 ENSDARG00000102438 4 1 - - - - 1.000 - - - -
4. si:dkeyp-35f12.3 si:dkeyp-35f12.3 3 1 - - - - 1.000 - - - -
5. si:dkey-20j3.4 si:dkey-20j3.4 4 1 - - - - 1.000 - - - -
6. SGPP2 ENSDARG00000079608 1 1 - - - - 1.000 - - - - sphingosine-1-phosphate phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:19953]
7. zbtb14 ENSDARG00000098273 36 1 1.000 - - - - - - - - zinc finger and BTB domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2946]
8. phox2bb ENSDARG00000091029 2 1 - - - - 1.000 - - - - paired-like homeobox 2bb [Source:ZFIN;Acc:ZDB-GENE-050407-3]
9. CABZ01117474.1 CABZ01117474.1 2 1 - - - - 1.000 - - - -
10. oprl1 ENSDARG00000071209 58 1 1.000 - - - - - - - - opiate receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-040312-4]
11. shank3a ENSDARG00000063332 5 1 - - - - 1.000 - - - - SH3 and multiple ankyrin repeat domains 3a [Source:ZFIN;Acc:ZDB-GENE-060503-369]
12. SLC25A22_1 SLC25A22_1 3 1 - - - - 1.000 - - - -
13. CT737190.3 CT737190.3 0 1 - - - - 1.000 - - - -
14. kiss1 ENSDARG00000075829 4 1 - - - - 1.000 - - - - KiSS-1 metastasis suppressor [Source:ZFIN;Acc:ZDB-GENE-080128-1]
15. BAI2 BAI2 0 1 - - - - 1.000 - - - -
16. si:dkey-11d18.2 0 1 - - - - 1.000 - - - - si:dkey-11d18.2
17. BX323796.1 BX323796.1 2 1 - - - - 1.000 - - - -
18. st3gal1l ENSDARG00000079310 10 1 - - - - 1.000 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-060321-2]
19. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 1 - - - - 1.000 - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
20. BX897720.4 BX897720.4 0 1 - - - - 1.000 - - - -
21. si:dkey-6a5.3 ENSDARG00000094001 0 1 - - - - 1.000 - - - - si:dkey-6a5.3 [Source:ZFIN;Acc:ZDB-GENE-041210-128]
22. si:rp71-18l21.1 si:rp71-18l21.1 2 1 - - - - 1.000 - - - -
23. fabp10a ENSDARG00000038439 4 1 - - - - 1.000 - - - - fatty acid binding protein 10a, liver basic [Source:ZFIN;Acc:ZDB-GENE-020318-1]
24. bik ENSDARG00000045549 18 1 1.000 - - - - - - - - BCL2 interacting killer [Source:ZFIN;Acc:ZDB-GENE-041210-181]
25. CABZ01085394.1 CABZ01085394.1 0 1 - - - - 1.000 - - - -
26. si:dkey-228i19.34 si:dkey-228i19.34 43 1 1.000 - - - - - - - -
27. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 - - - - 1.000 - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
28. crym ENSDARG00000062817 171 1 1.000 - - - - - - - - crystallin, mu [Source:ZFIN;Acc:ZDB-GENE-070112-1782]
29. ALOX5_1 ALOX5_1 0 1 - - - - 1.000 - - - -
30. tmem174 ENSDARG00000035388 2 1 - - - - 1.000 - - - - transmembrane protein 174 [Source:ZFIN;Acc:ZDB-GENE-080819-2]
31. pi15b ENSDARG00000061292 1 1 - - - - 1.000 - - - - peptidase inhibitor 15b [Source:ZFIN;Acc:ZDB-GENE-070912-590]
32. BX088718.1 ENSDARG00000101847 3 1 - - - - 1.000 - - - -
33. wu:fb63a08 38 1 1.000 - - - - - - - - wu:fb63a08
34. SNORD83 SNORD83 43 1 - - - - 1.000 - - - -
35. SNORD15_1 SNORD15_1 1 1 - - - - 1.000 - - - -
36. si:dkey-52j6.1 si:dkey-52j6.1 3 1 - - - - 1.000 - - - -
37. nfil3-4 ENSDARG00000092346 3 1 - - - - 1.000 - - - - nuclear factor, interleukin 3 regulated, member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-214]
38. nrn1la ENSDARG00000069368, ENSDARG00000112044, ENSDARG00000112869 16 1 - - - - 1.000 - - - - neuritin 1-like a [Source:NCBI gene;Acc:100004307]
39. si:ch211-133l5.4 ENSDARG00000092533 5 1 1.000 - - - - - - - - si:ch211-133l5.4 [Source:ZFIN;Acc:ZDB-GENE-081104-114]
40. men1_1 ENSDARG00000089456 3 1 - - - - 1.000 - - - - multiple endocrine neoplasia I [Source:ZFIN;Acc:ZDB-GENE-991110-12]
41. or111-11 ENSDARG00000041019 5 1 - - - - 1.000 - - - - odorant receptor, family D, subfamily 111, member 11 [Source:ZFIN;Acc:ZDB-GENE-010308-10]
42. trim62 ENSDARG00000060901 12 1 - - - - 1.000 - - - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
43. si:ch211-229g14.3 ENSDARG00000095101 5 1 1.000 - - - - - - - - si:ch211-229g14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-187]
44. zgc:162235 zgc:162235 9 1 - - - - 1.000 - - - -
45. aldh9a1a.2 ENSDARG00000055331, ENSDARG00000117162 45 1 1.000 - - - - - - - - aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-081104-507]
46. si:ch211-207e19.15 ENSDARG00000113022 5 1 - - - - 1.000 - - - - si:ch211-207e19.15 [Source:ZFIN;Acc:ZDB-GENE-110914-27]
47. XYLT2 ENSDARG00000059557 1 1 - - - - 1.000 - - - - xylosyltransferase II [Source:ZFIN;Acc:ZDB-GENE-081022-125]
48. SLC39A11 ENSDARG00000098194 23 1 1.000 - - - - - - - - solute carrier family 39 member 11 [Source:HGNC Symbol;Acc:HGNC:14463]
49. ampd2 ampd2 6 1 1.000 - - - - - - - -
50. BX649490.1 ENSDARG00000091718 7 1 - - - - 1.000 - - - - titin-like [Source:NCBI gene;Acc:101883412]
51. si:dkey-258f14.3 ENSDARG00000075974 9 1 - - - - 1.000 - - - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
52. si:ch211-217k17.10 ENSDARG00000079345 4 1 - - - - 1.000 - - - - si:ch211-217k17.10 [Source:ZFIN;Acc:ZDB-GENE-030131-8827]
53. btf3l4 ENSDARG00000089681 2 1 - - - - 1.000 - - - - basic transcription factor 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1650]
54. CCDC74B CCDC74B 8 1 - - - - 1.000 - - - -
55. spata7 ENSDARG00000075898 16 1 - - - - 1.000 - - - - spermatogenesis associated 7 [Source:ZFIN;Acc:ZDB-GENE-050419-61]
56. si:ch211-262a22.3 si:ch211-262a22.3 0 1 - - - - 1.000 - - - -
57. CDHR5 CDHR5 2 1 - - - - 1.000 - - - -
58. taar20b1 ENSDARG00000110415, ENSDARG00000110775, ENSDARG00000112935 1 1 - - - - 1.000 - - - - trace amine associated receptor 20b1 [Source:ZFIN;Acc:ZDB-GENE-060413-5]
59. si:dkeyp-33e11.1 6 1 - - - - 1.000 - - - - si:dkeyp-33e11.1, transcript variant X3
60. PTCHD2 PTCHD2 2 1 - - - - 1.000 - - - -
61. fgf23 ENSDARG00000045854 2 1 - - - - 1.000 - - - - fibroblast growth factor 23 [Source:ZFIN;Acc:ZDB-GENE-050201-4]
62. fgfr1b ENSDARG00000011190 10 1 1.000 - - - - - - - - fibroblast growth factor receptor 1b [Source:ZFIN;Acc:ZDB-GENE-060503-14]
63. lgsn ENSDARG00000007715 8 1 - - - - 1.000 - - - - lengsin, lens protein with glutamine synthetase domain [Source:ZFIN;Acc:ZDB-GENE-060312-26]
64. CABZ01073085.1 CABZ01073085.1 1 1 - - - - 1.000 - - - -
65. RNF39 RNF39 52 1 1.000 - - - - - - - -
66. BX469910.2 ENSDARG00000096127 6 1 - - - - 1.000 - - - -
67. zgc:173708 zgc:173708 2 1 - - - - 1.000 - - - -
68. si:ch211-268b13.6 si:ch211-268b13.6 0 1 - - - - 1.000 - - - -
69. ZNF70_5 ZNF70_5 25 1 - - - - 1.000 - - - -
70. PEG3_18 PEG3_18 0 1 - - - - 1.000 - - - -
71. rhpn1 ENSDARG00000052454 3 1 - - - - 1.000 - - - - rhophilin, Rho GTPase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-081031-79]
72. EDN3 14 1 - - - - 1.000 - - - - endothelin 3
73. ARX ARX 71 1 1.000 - - - - - - - -
74. FCHSD2 FCHSD2 35 1 1.000 - - - - - - - -
75. zgc:175107 ENSDARG00000075417 39 1 - - - - 1.000 - - - - zgc:175107 [Source:ZFIN;Acc:ZDB-GENE-080220-38]
76. VASP VASP 22 1 1.000 - - - - - - - -
77. si:dkey-14d8.19 si:dkey-14d8.19 12 1 - - - - 1.000 - - - -
78. hhat ENSDARG00000074428 8 1 - - - - 1.000 - - - - hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
79. CU694951.3 CU694951.3 0 1 - - - - 1.000 - - - -
80. ZNF135_2 ZNF135_2 27 1 - - - - 1.000 - - - -
81. si:dkey-23o4.6 ENSDARG00000034577, ENSDARG00000113997 1 1 - - - - 1.000 - - - - si:dkey-23o4.6 [Source:ZFIN;Acc:ZDB-GENE-100922-3]
82. dusp19 dusp19 0 1 - - - - 1.000 - - - -
83. CR848664.1 CR848664.1 12 1 - - - - 1.000 - - - -
84. mir144 0 1 - - - - 1.000 - - - - microRNA 144
85. lim2.2 ENSDARG00000059015 11 1 - - - - 1.000 - - - - lens intrinsic membrane protein 2.2 [Source:ZFIN;Acc:ZDB-GENE-060124-1]
86. C17orf105 C17orf105 1 1 - - - - 1.000 - - - -
87. AFAP1L1 AFAP1L1 1 1 - - - - 1.000 - - - -
88. ccdc14 ENSDARG00000098734 3 1 - - - - 1.000 - - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
89. CR356247.1 CR356247.1 2 1 - - - - 1.000 - - - -
90. PPP2R2A PPP2R2A 50 1 1.000 - - - - - - - -
91. CU655870.1 ENSDARG00000101035 1 1 - - - - 1.000 - - - -
92. c6ast3 ENSDARG00000024503 2 1 - - - - 1.000 - - - - six-cysteine containing astacin protease 3 [Source:ZFIN;Acc:ZDB-GENE-050320-99]
93. zp3b ENSDARG00000039828 15 1 - - - - 1.000 - - - - zona pellucida glycoprotein 3b [Source:ZFIN;Acc:ZDB-GENE-031124-2]
94. si:dkey-111i23.1 ENSDARG00000094811 1 1 - - - - 1.000 - - - - si:dkey-111i23.1 [Source:ZFIN;Acc:ZDB-GENE-070912-351]
95. tcf3a ENSDARG00000005915 12 1 - - - - 1.000 - - - - transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-51]
96. myo7bb ENSDARG00000077201 7 1 - - - - 1.000 - - - - myosin VIIBb [Source:ZFIN;Acc:ZDB-GENE-070912-482]
97. ptger2a ENSDARG00000011434 6 1 - - - - 1.000 - - - - prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
98. ppid_1 ENSDARG00000038835 4 1 - - - - 1.000 - - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
99. si:dkeyp-123a12.1 si:dkeyp-123a12.1 1 1 - - - - 1.000 - - - -
100. si:dkey-119g10.4 si:dkey-119g10.4 7 1 - - - - 1.000 - - - -

There are 309 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA