Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for U3_8

Gene Name Gene ID Reads Annotation
U3_8 U3_8 1










Genes with expression patterns similar to U3_8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. U1_23 U1_23 1 1 - - 1.000 - - - - - -
2. igf3 ENSDARG00000058058 19 1 - - 1.000 - - - - - - insulin-like growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-080611-1]
3. MAGI2 MAGI2 1 1 - - 1.000 - - - - - -
4. NAPB_1 NAPB_1 33 1 - - 1.000 - - - - - -
5. si:ch211-285d14.3 si:ch211-285d14.3 1 1 - - 1.000 - - - - - -
6. mxe ENSDARG00000014427 6 1 - - 1.000 - - - - - - myxovirus (influenza virus) resistance E [Source:ZFIN;Acc:ZDB-GENE-030131-9609]
7. dapp1 ENSDARG00000039535 23 1 - - 1.000 - - - - - - dual adaptor of phosphotyrosine and 3-phosphoinositides [Source:ZFIN;Acc:ZDB-GENE-050417-180]
8. si:dkey-196n19.5 si:dkey-196n19.5 6 1 - - 1.000 - - - - - -
9. si:ch211-125e6.12 ENSDARG00000092090 3 1 - - 1.000 - - - - - - si:ch211-125e6.12 [Source:ZFIN;Acc:ZDB-GENE-070912-36]
10. CABZ01070637.1 CABZ01070637.1 1 1 - - 1.000 - - - - - -
11. U3_8 U3_8 1 1 - - 1.000 - - - - - -
12. si:ch211-10j20.1 si:ch211-10j20.1 24 1 - - 1.000 - - - - - -
13. ca15b ENSDARG00000040510 5 1 - - 1.000 - - - - - - carbonic anhydrase XVb [Source:ZFIN;Acc:ZDB-GENE-040426-2222]
14. NRG3 NRG3 22 1 - - 1.000 - - - - - -
15. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1 - - 1.000 - - - - - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
16. LAMP1 1 1 - - 1.000 - - - - - - lysosomal-associated membrane protein 1
17. ASPG_1 ASPG_1 2 1 - - 1.000 - - - - - -
18. GPR141_1 GPR141_1 33 1 - - 1.000 - - - - - -
19. U1_49 U1_49 1 1 - - 1.000 - - - - - -
20. CU459094.2 ENSDARG00000113503 5 1 - - 1.000 - - - - - - uncharacterized LOC100331538 [Source:NCBI gene;Acc:100331538]
21. pxn pxn 10 1 - - 1.000 - - - - - -
22. lhcgr ENSDARG00000026081 2 1 - - 1.000 - - - - - - luteinizing hormone/choriogonadotropin receptor [Source:ZFIN;Acc:ZDB-GENE-040806-3]
23. CR774179.2 ENSDARG00000102385 3 1 - - 1.000 - - - - - -
24. bdkrb1 ENSDARG00000020744 4 1 - - 1.000 - - - - - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
25. si:dkey-7f3.14 ENSDARG00000095050 18 1 - - 1.000 - - - - - - si:dkey-7f3.14 [Source:ZFIN;Acc:ZDB-GENE-100922-186]
26. mgp ENSDARG00000086189 9 1 - - 1.000 - - - - - - matrix Gla protein [Source:ZFIN;Acc:ZDB-GENE-060928-1]
27. si:dkey-246g23.2 ENSDARG00000062964 5 1 - - 1.000 - - - - - - si:dkey-246g23.2 [Source:ZFIN;Acc:ZDB-GENE-050419-100]
28. c1qtnf2 ENSDARG00000059944 3 1 - - 1.000 - - - - - - C1q and TNF related 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5133]
29. cx28.9 ENSDARG00000041797 12 1 - - 1.000 - - - - - - connexin 28.9 [Source:ZFIN;Acc:ZDB-GENE-041114-200]
30. CABZ01046997.1 ENSDARG00000073901 2 1 - - 1.000 - - - - - -
31. si:ch211-67f13.7 ENSDARG00000077845 8 1 - - 1.000 - - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
32. gdpd4a ENSDARG00000102447 1 1 - - 1.000 - - - - - - glycerophosphodiester phosphodiesterase domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-091204-436]
33. si:ch211-274k16.4 si:ch211-274k16.4 6 1 - - 1.000 - - - - - -
34. ABCC6 ABCC6 5 1 - - 1.000 - - - - - -
35. fam57bb ENSDARG00000074564 2 1 - - 1.000 - - - - - - family with sequence similarity 57, member Bb [Source:ZFIN;Acc:ZDB-GENE-110603-2]
36. CR933820.2 CR933820.2 152 1 - - 1.000 - - - - - -
37. camk1ga ENSDARG00000044526 5 1 - - 1.000 - - - - - - calcium/calmodulin-dependent protein kinase IGa [Source:ZFIN;Acc:ZDB-GENE-030131-7594]
38. zgc:162724 zgc:162724 9 1 - - 1.000 - - - - - -
39. TRIM14_3 TRIM14_3 7 1 - - 1.000 - - - - - -
40. CABZ01084010.1 CABZ01084010.1 4 1 - - 1.000 - - - - - -
41. CU693370.1 CU693370.1 1 1 - - 1.000 - - - - - -
42. CABZ01074669.1 CABZ01074669.1 12 1 - - 1.000 - - - - - -
43. prkar2ab ENSDARG00000009477 2 1 - - 1.000 - - - - - - protein kinase, cAMP-dependent, regulatory, type II, alpha, B [Source:ZFIN;Acc:ZDB-GENE-040426-2427]
44. ENSDARG00000029805 ENSDARG00000029805 4 0.978 - - 0.978 - - - - - -
45. arhgap23b ENSDARG00000026840 6 0.972 - - 0.972 - - - - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
46. OVGP1 ENSDARG00000075745 6 0.941 - - 0.941 - - - - - - oviductal glycoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-118]
47. KCNB2 ENSDARG00000088842 35 0.941 - - 0.941 - - - - - - potassium voltage-gated channel subfamily B member 2 [Source:HGNC Symbol;Acc:HGNC:6232]
48. si:ch211-255a21.4 si:ch211-255a21.4 26 0.941 - - 0.941 - - - - - -
49. si:dkeyp-20g2.3 ENSDARG00000093389, ENSDARG00000094279 1 0.941 - - 0.941 - - - - - - si:dkeyp-20g2.3 [Source:ZFIN;Acc:ZDB-GENE-070705-537]
50. CABZ01088346.1 ENSDARG00000099362 30 0.941 - - 0.941 - - - - - -
51. si:ch211-198k9.12 si:ch211-198k9.12 4 0.93 - - 0.930 - - - - - -
52. ZNF341 ENSDARG00000103725 6 0.93 - - 0.930 - - - - - - zinc finger protein 341 [Source:ZFIN;Acc:ZDB-GENE-080204-99]
53. CU104716.1 ENSDARG00000109332 12 0.93 - - 0.930 - - - - - -
54. cx55.5 13 0.93 - - 0.930 - - - - - - connexin 55.5, transcript variant X1
55. fstl3 ENSDARG00000025670 41 0.93 - - 0.930 - - - - - - follistatin-like 3 (secreted glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-050913-111]
56. CR381673.2 ENSDARG00000103241 7 0.918 - - 0.918 - - - - - -
57. gltpd2 ENSDARG00000067889, ENSDARG00000114510 27 0.915 - - 0.915 - - - - - - glycolipid transfer protein domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060526-346]
58. ldhbb ENSDARG00000071076 31 0.912 - - 0.912 - - - - - - lactate dehydrogenase Bb [Source:ZFIN;Acc:ZDB-GENE-040718-176]
59. pyyb ENSDARG00000035832 18 0.912 - - 0.912 - - - - - - peptide YYb [Source:ZFIN;Acc:ZDB-GENE-060215-2]
60. CU633991.1 CU633991.1 16 0.909 - - 0.909 - - - - - -
61. ccdc79 2 0.9 - - 0.900 - - - - - - coiled-coil domain containing 79
62. zgc:113343 ENSDARG00000103196 2 0.9 - - 0.900 - - - - - - zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]
63. ppp1r42 ENSDARG00000057632 32 0.9 - - 0.900 - - - - - - protein phosphatase 1, regulatory subunit 42 [Source:ZFIN;Acc:ZDB-GENE-040704-43]
64. PRODH PRODH 13 0.9 - - 0.900 - - - - - -
65. ADAD2 ENSDARG00000105626 6 0.9 - - 0.900 - - - - - - adenosine deaminase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-130530-788]
66. si:ch211-244b2.4 ENSDARG00000045530 32 0.9 - - 0.900 - - - - - - si:ch211-244b2.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8699]
67. CNGA1 3 0.9 - - 0.900 - - - - - - cyclic nucleotide gated channel alpha 1
68. alpi.2 ENSDARG00000053774 21 0.9 - - 0.900 - - - - - - alkaline phosphatase, intestinal, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050626-142]
69. si:dkeyp-87d8.9 si:dkeyp-87d8.9 21 0.896 - - 0.896 - - - - - -
70. mcf2a ENSDARG00000022895 26 0.894 - - 0.894 - - - - - - MCF.2 cell line derived transforming sequence a [Source:ZFIN;Acc:ZDB-GENE-030616-52]
71. si:dkey-226m8.9 si:dkey-226m8.9 4 0.888 - - 0.888 - - - - - -
72. ERMP1 1 0.883 - - 0.883 - - - - - - endoplasmic reticulum metallopeptidase 1
73. CR391977.3 CR391977.3 76 0.857 - - 0.857 - - - - - -
74. MICU3_1 MICU3_1 51 0.856 - - 0.856 - - - - - -
75. zgc:112994 ENSDARG00000026296 5 0.849 - - 0.849 - - - - - - zgc:112994 [Source:ZFIN;Acc:ZDB-GENE-050522-519]
76. si:dkey-12e7.4 ENSDARG00000041073, ENSDARG00000111062 13 0.848 - - 0.848 - - - - - - si:dkey-12e7.4 [Source:ZFIN;Acc:ZDB-GENE-050419-83]
77. il1rapl1b ENSDARG00000104853 52 0.845 - - 0.845 - - - - - - interleukin 1 receptor accessory protein-like 1b [Source:ZFIN;Acc:ZDB-GENE-090109-2]
78. ABCA7 ABCA7 12 0.839 - - 0.839 - - - - - -
79. SLC22A7_1 SLC22A7_1 2 0.839 - - 0.839 - - - - - -
80. fem1a ENSDARG00000067966 11 0.834 - - 0.834 - - - - - - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
81. SLC7A8 SLC7A8 25 0.834 - - 0.834 - - - - - -
82. TRIM14_2 TRIM14_2 15 0.834 - - 0.834 - - - - - -
83. gfpt1 ENSDARG00000057465 14 0.833 - - 0.833 - - - - - - glutamine--fructose-6-phosphate transaminase 1 [Source:ZFIN;Acc:ZDB-GENE-070423-1]
84. tp53i11a ENSDARG00000069430 65 0.83 - - 0.830 - - - - - - tumor protein p53 inducible protein 11a [Source:ZFIN;Acc:ZDB-GENE-050306-58]
85. bmp1b ENSDARG00000028053 25 0.819 - - 0.819 - - - - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
86. CU693480.1 CU693480.1 51 0.818 - - 0.818 - - - - - -
87. zmat4b ENSDARG00000061419 7 0.814 - - 0.814 - - - - - - zinc finger, matrin-type 4b [Source:ZFIN;Acc:ZDB-GENE-091118-68]
88. BX928744.1 BX928744.1 15 0.813 - - 0.813 - - - - - -
89. CU459081.1 CU459081.1 15 0.812 - - 0.812 - - - - - -
90. aox1 aox1 14 0.811 - - 0.811 - - - - - -
91. CT955963.1 ENSDARG00000100370 23 0.804 - - 0.804 - - - - - -
92. GPR26 ENSDARG00000074389, ENSDARG00000116243 21 0.803 - - 0.803 - - - - - - G protein-coupled receptor 26 [Source:ZFIN;Acc:ZDB-GENE-131121-131]
93. ungb ENSDARG00000094922 16 0.8 - - 0.800 - - - - - - uracil DNA glycosylase b [Source:ZFIN;Acc:ZDB-GENE-070705-360]
94. RAP1GAP2 RAP1GAP2 52 0.8 - - 0.800 - - - - - -
95. si:dkeyp-110e4.11 ENSDARG00000071585 148 0.794 - - 0.794 - - - - - - si:dkeyp-110e4.11 [Source:ZFIN;Acc:ZDB-GENE-070424-267]
96. entpd2a.1 ENSDARG00000035506 14 0.789 - - 0.789 - - - - - - ectonucleoside triphosphate diphosphohydrolase 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040724-187]
97. cul4a ENSDARG00000096578 14 0.783 - - 0.783 - - - - - - cullin 4A [Source:ZFIN;Acc:ZDB-GENE-040426-1357]
98. BX004828.1 BX004828.1 31 0.783 - - 0.783 - - - - - -
99. CR925813.2 CR925813.2 9 0.777 - - 0.777 - - - - - -
100. nphs2 ENSDARG00000042850 31 0.774 - - 0.774 - - - - - - nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]

There are 17 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA