Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for U3_4

Gene Name Gene ID Reads Annotation
U3_4 U3_4 2










Genes with expression patterns similar to U3_4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. U3_4 U3_4 2 2 - - - - - - - 1.000 1.000
2. CU570791.1 ENSDARG00000098597 4 2 - - - - - - - 1.000 1.000 NACHT and WD repeat domain-containing protein 2-like [Source:NCBI gene;Acc:108179119]
3. paqr8 ENSDARG00000088828 4 1 - - - - - - - - 1.000 progestin and adipoQ receptor family member VIII [Source:ZFIN;Acc:ZDB-GENE-030728-3]
4. si:ch211-57m13.9 ENSDARG00000095884 10 1 - - - - - - - - 1.000 si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
5. U8_1 U8_1 2 1 - - - - - - - 1.000 -
6. BX465203.1 ENSDARG00000113985 8 1 - - - - - - - 1.000 -
7. zdhhc18b ENSDARG00000105034 1 1 - - - - - - - 1.000 - zinc finger, DHHC-type containing 18b [Source:ZFIN;Acc:ZDB-GENE-030131-6315]
8. adamts13 ENSDARG00000076270 8 1 - - - - - - - - 1.000 ADAM metallopeptidase with thrombospondin type 1 motif, 13 [Source:ZFIN;Acc:ZDB-GENE-070814-7]
9. P2RY6 1 1 - - - - - - - 1.000 - pyrimidinergic receptor P2Y6
10. CU182107.2 ENSDARG00000112862 2 1 - - - - - - - - 1.000
11. nitr14a ENSDARG00000112464 1 1 - - - - - - - 1.000 - novel immune-type receptor 14a [Source:ZFIN;Acc:ZDB-GENE-070108-3]
12. CABZ01075947.1 CABZ01075947.1 2 1 - - - - - - - - 1.000
13. si:dkey-121j17.5 ENSDARG00000014232 18 1 - - - - - - - - 1.000 si:dkey-121j17.5 [Source:ZFIN;Acc:ZDB-GENE-030131-4745]
14. RNase_MRP RNase_MRP 118 1 - - - - - - - 1.000 -
15. si:dkey-156j15.1 ENSDARG00000109821 1 1 - - - - - - - 1.000 - si:dkey-156j15.1 [Source:ZFIN;Acc:ZDB-GENE-110914-81]
16. si:ch211-278p9.1 ENSDARG00000087532 18 1 - - - - - - - - 1.000 si:ch211-278p9.1 [Source:ZFIN;Acc:ZDB-GENE-081028-46]
17. Metazoa_SRP_27 Metazoa_SRP_27 2 1 - - - - - - - - 1.000
18. Metazoa_SRP_6 Metazoa_SRP_6 7 1 - - - - - - - - 1.000
19. gfra2b ENSDARG00000044015 5 1 - - - - - - - 1.000 - GDNF family receptor alpha 2b [Source:ZFIN;Acc:ZDB-GENE-091204-26]
20. FNBP1_1 FNBP1_1 3 1 - - - - - - - 1.000 -
21. NUDT13 ENSDARG00000057417, ENSDARG00000115835 5 1 - - - - - - - 1.000 - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
22. EXD1 ENSDARG00000098669 27 1 - - - - - - - - 1.000 exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
23. si:ch211-186e20.7 ENSDARG00000077960 1 1 - - - - - - - - 1.000 si:ch211-186e20.7 [Source:ZFIN;Acc:ZDB-GENE-110407-6]
24. si:dkey-182g1.5 si:dkey-182g1.5 22 1 - - - - - - - 1.000 -
25. ints12_1 ENSDARG00000091678 11 1 - - - - - - - - 1.000 integrator complex subunit 12 [Source:ZFIN;Acc:ZDB-GENE-040625-178]
26. papd4_1 6 1 - - - - - - - - 1.000 PAP associated domain containing 4, transcript variant X1
27. si:ch211-190p8.2 ENSDARG00000088276 1 1 - - - - - - - - 1.000 si:ch211-190p8.2 [Source:ZFIN;Acc:ZDB-GENE-070424-145]
28. zgc:172131 ENSDARG00000076269 32 1 - - - - - - - 1.000 - zgc:172131 [Source:ZFIN;Acc:ZDB-GENE-080204-47]
29. irf1a ENSDARG00000043492 5 1 - - - - - - - - 1.000 interferon regulatory factor 1a [Source:ZFIN;Acc:ZDB-GENE-060421-4031]
30. col8a1b ENSDARG00000003533 18 1 - - - - - - - - 1.000 collagen, type VIII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-060503-140]
31. dusp3b ENSDARG00000060130 3 1 - - - - - - - - 1.000 dual specificity phosphatase 3b [Source:ZFIN;Acc:ZDB-GENE-030616-38]
32. pcdh1g2 ENSDARG00000101232 5 1 - - - - - - - - 1.000 protocadherin 1 gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050608-2]
33. ZNRF4 ZNRF4 16 1 - - - - - - - - 1.000
34. WDR7 2 1 - - - - - - - - 1.000 WD repeat domain 7
35. 5S_rRNA_26 5S_rRNA_26 1 1 - - - - - - - 1.000 -
36. si:ch211-244b2.3 ENSDARG00000069244 19 1 - - - - - - - - 1.000 si:ch211-244b2.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4737]
37. CA4 CA4 1 1 - - - - - - - 1.000 -
38. si:dkey-237i9.8 ENSDARG00000103020 3 1 - - - - - - - 1.000 - si:dkey-237i9.8 [Source:ZFIN;Acc:ZDB-GENE-120215-145]
39. uprt ENSDARG00000035549, ENSDARG00000110518 2 0.991 - - - - - - - - 0.991 uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-2411]
40. si:dkey-261j4.4 ENSDARG00000035150 32 0.991 - - - - - - - - 0.991 si:dkey-261j4.4 [Source:ZFIN;Acc:ZDB-GENE-060531-125]
41. si:ch73-233m11.2 ENSDARG00000091859 2 0.98 - - - - - - - - 0.980 si:ch73-233m11.2 [Source:ZFIN;Acc:ZDB-GENE-081104-266]
42. si:ch1073-47b13.2 si:ch1073-47b13.2 3 0.975 - - - - - - - - 0.975
43. RIC3_1 ENSDARG00000105549 2 0.975 - - - - - - - - 0.975 RIC3 acetylcholine receptor chaperone [Source:HGNC Symbol;Acc:HGNC:30338]
44. si:ch73-211l2.3 ENSDARG00000075932 4 0.973 - - - - - - - - 0.973 si:ch73-211l2.3 [Source:ZFIN;Acc:ZDB-GENE-081105-52]
45. CU855895.3 CU855895.3 21 0.966 - - - - - - - - 0.966
46. scd ENSDARG00000033662 146 0.956 - - - - - - - - 0.956 stearoyl-CoA desaturase (delta-9-desaturase) [Source:ZFIN;Acc:ZDB-GENE-031106-3]
47. mapk9 ENSDARG00000077364 38 0.939 - - - - - - - - 0.939 mitogen-activated protein kinase 9 [Source:ZFIN;Acc:ZDB-GENE-091117-28]
48. TRIM35_11 TRIM35_11 23 0.939 - - - - - - - - 0.939
49. lcp2a ENSDARG00000055955 23 0.932 - - - - - - - - 0.932 lymphocyte cytosolic protein 2a [Source:ZFIN;Acc:ZDB-GENE-041114-97]
50. zgc:162969 2 0.931 - - - - - - - 0.931 - zgc:162969
51. CABZ01016604.1 CABZ01016604.1 12 0.929 - - - - - - - 0.929 -
52. si:dkey-26i13.8 ENSDARG00000062606 13 0.928 - - - - - - - 0.928 - si:dkey-26i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-134]
53. zgc:174694 zgc:174694 2 0.928 - - - - - - - 0.928 -
54. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 0.924 - - - - - - - - 0.924 aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
55. rag2 ENSDARG00000052121 15 0.911 - - - - - - - - 0.911 recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
56. si:ch211-255f4.2 ENSDARG00000098898 6 0.904 - - - - - - - - 0.904 si:ch211-255f4.2 [Source:ZFIN;Acc:ZDB-GENE-050208-708]
57. popdc2 ENSDARG00000069922, ENSDARG00000109930 5 0.876 - - - - - - - 0.876 - popeye domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060518-2]
58. vtg7 ENSDARG00000092419, ENSDARG00000112466, ENSDARG00000113334 48 0.874 - - - - - - - 0.874 - vitellogenin 7 [Source:ZFIN;Acc:ZDB-GENE-001201-6]
59. si:dkeyp-98a7.9 ENSDARG00000087584, ENSDARG00000113815 5 0.869 - - - - - - - 0.869 - si:dkeyp-98a7.9 [Source:ZFIN;Acc:ZDB-GENE-050208-680]
60. bhik bhik 23 0.868 - - - - - - - - 0.868
61. CCDC96 ENSDARG00000035963 5 0.863 - - - - - - - 0.863 - coiled-coil domain containing 96 [Source:ZFIN;Acc:ZDB-GENE-081022-156]
62. tceanc2 ENSDARG00000062919 32 0.858 - - - - - - - - 0.858 transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
63. CU855821.2 CU855821.2 21 0.857 - - - - - - - - 0.857
64. slc5a1 ENSDARG00000013871 4 0.849 - - - - - - - 0.849 - solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1524]
65. c1qtnf2 ENSDARG00000059944 3 0.849 - - - - - - - 0.849 - C1q and TNF related 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5133]
66. CLPX CLPX 2 0.832 - - - - - - - - 0.832
67. ela3l ENSDARG00000007276 11 0.828 - - - - - - - 0.828 - elastase 3 like [Source:ZFIN;Acc:ZDB-GENE-060710-2]
68. CU571169.4 CU571169.4 12 0.793 - - - - - - - - 0.793
69. diaph2 ENSDARG00000076060 26 0.792 - - - - - - - 0.792 - diaphanous-related formin 2 [Source:ZFIN;Acc:ZDB-GENE-090115-1]
70. C5HXorf57 C5HXorf57 4 0.785 - - - - - - - 0.785 -
71. si:dkey-49n23.1 ENSDARG00000040920 3 0.782 - - - - - - - 0.782 - si:dkey-49n23.1 [Source:ZFIN;Acc:ZDB-GENE-050208-762]
72. CR855327.1 CR855327.1 6 0.779 - - - - - - - 0.779 -
73. CH25H ENSDARG00000045190 6 0.778 - - - - - - - 0.778 - cholesterol 25-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-041212-81]
74. asf1ba_1 ENSDARG00000101037 3 0.778 - - - - - - - 0.778 - anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]
75. caprin2 ENSDARG00000020749 39 0.774 - - - - - - - - 0.774 caprin family member 2 [Source:ZFIN;Acc:ZDB-GENE-040812-2]
76. si:ch211-128b10.5 si:ch211-128b10.5 3 0.772 - - - - - - - - 0.772
77. unc5da ENSDARG00000092722 8 0.769 - - - - - - - 0.769 - unc-5 netrin receptor Da [Source:ZFIN;Acc:ZDB-GENE-080908-2]
78. FP017279.3 FP017279.3 31 0.764 - - - - - - - 0.764 -
79. lpar5a ENSDARG00000010384 29 0.751 - - - - - - - - 0.751 lysophosphatidic acid receptor 5a [Source:ZFIN;Acc:ZDB-GENE-030131-1193]
80. osgin2 ENSDARG00000040302 45 0.748 - - - - - - - - 0.748 oxidative stress induced growth inhibitor family member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-57]
81. paplnb ENSDARG00000042186 18 0.745 - - - - - - - - 0.745 papilin b, proteoglycan-like sulfated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-6023]
82. si:dkey-283b1.7 ENSDARG00000053460 10 0.738 - - - - - - - - 0.738 si:dkey-283b1.7 [Source:ZFIN;Acc:ZDB-GENE-120215-126]
83. CR626874.1 ENSDARG00000100141 55 0.735 - - - - - - - - 0.735
84. si:dkeyp-10a3.2 18 0.731 - - - - - - - - 0.731 si:dkeyp-10a3.2
85. abcc8 ENSDARG00000051879, ENSDARG00000114458 18 0.728 - - - - - - - - 0.728 ATP-binding cassette, sub-family C (CFTR/MRP), member 8 [Source:ZFIN;Acc:ZDB-GENE-050517-22]
86. pacrg ENSDARG00000087556 25 0.727 - - - - - - - - 0.727 PARK2 co-regulated [Source:ZFIN;Acc:ZDB-GENE-041114-100]
87. rnf213b ENSDARG00000103551 63 0.725 - - - - - - - 0.725 - ring finger protein 213b [Source:ZFIN;Acc:ZDB-GENE-110822-1]
88. bsnd ENSDARG00000086265 178 0.724 - - - - - - - - 0.724 barttin CLCNK-type chloride channel accessory beta subunit [Source:ZFIN;Acc:ZDB-GENE-070705-548]
89. CR628365.1 ENSDARG00000097736 29 0.721 - - - - - - - - 0.721
90. zgc:171426 ENSDARG00000074764 16 0.72 - - - - - - - 0.720 - zgc:171426 [Source:ZFIN;Acc:ZDB-GENE-080212-2]
91. SNORD35_2 SNORD35_2 5 0.72 - - - - - - - 0.720 -
92. itga4 ENSDARG00000103056 223 0.719 - - - - - - - - 0.719 integrin alpha 4 [Source:ZFIN;Acc:ZDB-GENE-110411-108]
93. si:dkey-21c1.1 ENSDARG00000096725 65 0.717 - - - - - - - - 0.717 si:dkey-21c1.1 [Source:ZFIN;Acc:ZDB-GENE-130603-45]
94. C10H5orf42 C10H5orf42 5 0.717 - - - - - - - - 0.717
95. si:dkey-26g8.9 si:dkey-26g8.9 2 0.716 - - - - - - - 0.716 -
96. opn4xb ENSDARG00000103259 18 0.703 - - - - - - - - 0.703 opsin 4xb [Source:ZFIN;Acc:ZDB-GENE-070705-526]
97. si:dkey-228i19.32 si:dkey-228i19.32 9 0.701 - - - - - - - 0.701 -
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA