Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for U2AF1

Gene Name Gene ID Reads Annotation
U2AF1 ENSGALG00000016198 45027 U2 small nuclear RNA auxiliary factor 1 [Source:NCBI gene;Acc:395370]











Genes with expression patterns similar to U2AF1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. U2AF1 ENSGALG00000016198 45027 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 U2 small nuclear RNA auxiliary factor 1 [Source:NCBI gene;Acc:395370]
2. RPL35 ENSGALG00000035677 252113 1.474 0.746 - 0.728 - - - - - - - ribosomal protein L35 [Source:NCBI gene;Acc:374133]
3. TCEB3 ENSGALG00000034625 184577 1.45 0.709 - - - 0.741 - - - - - transcription elongation factor B subunit 3 [Source:NCBI gene;Acc:419683]
4. ALYREF ENSGALG00000007237 48479 1.446 0.701 - - - - - 0.745 - - - Aly/REF export factor [Source:NCBI gene;Acc:769169]
5. TMCO1 ENSGALG00000033460 22822 0.928 - - - - - - - 0.928 - - transmembrane and coiled-coil domains 1 [Source:HGNC Symbol;Acc:HGNC:18188]
6. SMC3 ENSGALG00000008585 16618 0.882 - - - - - - 0.882 - - - structural maintenance of chromosomes 3 [Source:NCBI gene;Acc:395188]
7. TCEB1 TCEB1 17818 0.87 - - - - - - 0.870 - - -
8. BRIX1 ENSGALG00000003373 27878 0.853 - - - - 0.853 - - - - - BRX1, biogenesis of ribosomes [Source:NCBI gene;Acc:427433]
9. EIF3B ENSGALG00000040999 49971 0.836 - - - - - - - 0.836 - - eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280]
10. ARGLU1 ENSGALG00000016855 25633 0.807 - - - - 0.807 - - - - - arginine and glutamate rich 1 [Source:NCBI gene;Acc:418765]
11. CALM CALM 85776 0.785 - - - - 0.785 - - - - -
12. PSME3 ENSGALG00000002937 41148 0.775 - - - - 0.775 - - - - - proteasome activator subunit 3 [Source:NCBI gene;Acc:420017]
13. CBX3 ENSGALG00000011038 40977 0.758 - - - - 0.758 - - - - - chromobox 3 [Source:NCBI gene;Acc:395355]
14. KPNA2 ENSGALG00000003584 76058 0.755 - - - - 0.755 - - - - - karyopherin subunit alpha 2 [Source:NCBI gene;Acc:417420]
15. FIG4 ENSGALG00000015070 3018 0.752 - - - - - - 0.752 - - - FIG4 phosphoinositide 5-phosphatase [Source:NCBI gene;Acc:421762]
16. ENSGALG00000007210 ENSGALG00000007210 2203 0.752 - - - - - - 0.752 - - -
17. GSTA GSTA 3130 0.752 - - - - - - 0.752 - - -
18. LGALS3 ENSGALG00000012173 3306 0.752 - - - - - - 0.752 - - - galectin 3 [Source:NCBI gene;Acc:373917]
19. G3BP1 ENSGALG00000004160 36795 0.752 - - - - 0.752 - - - - - G3BP stress granule assembly factor 1 [Source:NCBI gene;Acc:416265]
20. ETFA ENSGALG00000002925 24053 0.751 - - - - - - 0.751 - - - electron-transfer-flavoprotein, alpha polypeptide [Source:NCBI gene;Acc:415353]
21. TXNRD3 ENSGALG00000039363 8016 0.751 - - - - - - 0.751 - - - thioredoxin reductase 3 [Source:NCBI gene;Acc:416031]
22. RPS2 ENSGALG00000005490 293634 0.751 - - - - 0.751 - - - - - ribosomal protein S2 [Source:NCBI gene;Acc:416544]
23. SFRP1 ENSGALG00000003473 5917 0.751 - - - - - - 0.751 - - - secreted frizzled related protein 1 [Source:NCBI gene;Acc:395237]
24. DNAJC2 ENSGALG00000008249 28064 0.751 - - - - - - 0.751 - - - DnaJ heat shock protein family (Hsp40) member C2 [Source:NCBI gene;Acc:417717]
25. ZFP161 ZFP161 3538 0.751 - - - - - - 0.751 - - -
26. COQ9 ENSGALG00000001184 10174 0.751 - - - - - - 0.751 - - - coenzyme Q9 [Source:NCBI gene;Acc:415636]
27. ENSGALG00000002595 ENSGALG00000002595 32163 0.75 - - - - - - 0.750 - - -
28. PLK1 ENSGALG00000006110 12892 0.75 - - - - - - 0.750 - - - polo like kinase 1 [Source:NCBI gene;Acc:416575]
29. FAM63A 8470 0.75 - - - - - - 0.750 - - - family with sequence similarity 63 member A, transcript variant X2
30. CCNG1 ENSGALG00000001718 9873 0.75 - - - - - - 0.750 - - - cyclin G1 [Source:HGNC Symbol;Acc:HGNC:1592]
31. CCDC85A ENSGALG00000043080 7624 0.75 - - - - - - 0.750 - - - coiled-coil domain containing 85A [Source:HGNC Symbol;Acc:HGNC:29400]
32. ATOX1 ENSGALG00000004176 16486 0.75 - - - - - - 0.750 - - - antioxidant 1 copper chaperone [Source:NCBI gene;Acc:770231]
33. UQCR11 ENSGALG00000001096 25245 0.748 - - - - - - 0.748 - - - ubiquinol-cytochrome c reductase, complex III subunit XI [Source:NCBI gene;Acc:770135]
34. UTRN ENSGALG00000012256 9980 0.748 - - - - - - 0.748 - - - utrophin [Source:HGNC Symbol;Acc:HGNC:12635]
35. PAPOLA ENSGALG00000033099 20532 0.746 - - - - - - 0.746 - - - poly(A) polymerase alpha [Source:NCBI gene;Acc:395878]
36. HP1BP3 ENSGALG00000010079 33723 0.745 - - - - 0.745 - - - - - heterochromatin protein 1 binding protein 3 [Source:NCBI gene;Acc:425543]
37. TBL1X ENSGALG00000040006 28597 0.745 - - - - 0.745 - - - - - transducin beta like 1 X-linked [Source:NCBI gene;Acc:426045]
38. SUMO2 ENSGALG00000007971 46283 0.745 - - - - 0.745 - - - - - small ubiquitin-like modifier 2 [Source:NCBI gene;Acc:770125]
39. PAK1IP1 ENSGALG00000012724 10907 0.742 - - - - - - 0.742 - - - PAK1 interacting protein 1 [Source:NCBI gene;Acc:420850]
40. BIRC5 ENSGALG00000008713 46856 0.742 - - - - 0.742 - - - - - baculoviral IAP repeat containing 5 [Source:NCBI gene;Acc:374078]
41. SUMO1 ENSGALG00000008435 19847 0.741 - - - - - - 0.741 - - - small ubiquitin-like modifier 1 [Source:NCBI gene;Acc:373930]
42. COX4I1 68632 0.74 - - - - - - 0.740 - - - cytochrome c oxidase subunit 4I1, transcript variant X1
43. PTP4A1 ENSGALG00000016271 23953 0.74 - - - - - - 0.740 - - - protein tyrosine phosphatase type IVA, member 1 [Source:NCBI gene;Acc:421877]
44. DHX15 ENSGALG00000014395 24041 0.74 - - - - - - 0.740 - - - DEAH-box helicase 15 [Source:NCBI gene;Acc:422813]
45. GCSH ENSGALG00000032679 29231 0.739 - - - - - - 0.739 - - - glycine cleavage system protein H [Source:NCBI gene;Acc:415803]
46. EIF2S1 ENSGALG00000009565 63906 0.738 - - - - 0.738 - - - - - eukaryotic translation initiation factor 2 subunit alpha [Source:NCBI gene;Acc:423279]
47. TOP2B ENSGALG00000011300 25048 0.738 - - - - 0.738 - - - - - DNA topoisomerase 2-beta [Source:NCBI gene;Acc:395966]
48. TOMM70A TOMM70A 24085 0.736 - - - - - - 0.736 - - -
49. NOL6 ENSGALG00000030730 7191 0.734 - - - - - - 0.734 - - - nucleolar protein 6
50. DDOST ENSGALG00000010073 18707 0.734 - - - - 0.734 - - - - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit [Source:NCBI gene;Acc:425542]
51. ELOVL5 ENSGALG00000016314 18163 0.732 - - - - 0.732 - - - - - ELOVL fatty acid elongase 5 [Source:NCBI gene;Acc:428646]
52. C5H11ORF58 C5H11ORF58 36659 0.73 - - - - - - 0.730 - - -
53. ENSGALG00000016007 ENSGALG00000016007 62448 0.73 - - - - - - 0.730 - - -
54. API5 ENSGALG00000037968 18265 0.728 - - - - - - - 0.728 - - apoptosis inhibitor 5 [Source:NCBI gene;Acc:423168]
55. RPL14 ENSGALG00000043379 239812 0.728 - - - - - - 0.728 - - - ribosomal protein L14
56. HSPA5 ENSGALG00000001000 40342 0.722 - - - - 0.722 - - - - - heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) [Source:NCBI gene;Acc:396487]
57. CSNK2A1 ENSGALG00000006197 41409 0.722 - - - - 0.722 - - - - - casein kinase 2 alpha 1 [Source:NCBI gene;Acc:432370]
58. DDX27 ENSGALG00000006974 18388 0.72 - - - - 0.720 - - - - - DEAD-box helicase 27 [Source:NCBI gene;Acc:419308]
59. SLC16A1 ENSGALG00000001717 18566 0.716 - - - - 0.716 - - - - - solute carrier family 16 member 1 [Source:NCBI gene;Acc:419875]
60. UQCRH ENSGALG00000017380 55734 0.715 - - - - 0.715 - - - - - ubiquinol-cytochrome c reductase hinge protein [Source:NCBI gene;Acc:771939]
61. SRSF7 ENSGALG00000033120 43444 0.714 - - - - 0.714 - - - - - serine and arginine rich splicing factor 7 [Source:NCBI gene;Acc:426265]
62. YWHAB ENSGALG00000004143 40276 0.713 - - - - - - 0.713 - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta [Source:NCBI gene;Acc:419190]
63. MT-CO3 MT-CO3 2943682 0.713 - - - - - - 0.713 - - -
64. CIRBP ENSGALG00000030918 309258 0.713 0.713 - - - - - - - - - cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
65. GSPT1 15580 0.709 - - - - 0.709 - - - - - G1 to S phase transition 1, transcript variant X1
66. UBE2D3 ENSGALG00000012311 39831 0.708 - - - - 0.708 - - - - - ubiquitin conjugating enzyme E2 D3 [Source:NCBI gene;Acc:422713]
67. C5ORF13 C5ORF13 50177 0.708 - - - - - - 0.708 - - -
68. KIF2A ENSGALG00000014737 16391 0.707 - - - - 0.707 - - - - - kinesin heavy chain member 2A [Source:NCBI gene;Acc:427156]
69. ATP5G3 168626 0.706 0.706 - - - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9), transcript variant 3
70. YWHAH ENSGALG00000006743 29828 0.705 - - - - 0.705 - - - - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta [Source:NCBI gene;Acc:416955]
71. MRPS26 ENSGALG00000014118 27422 0.704 - - - - 0.704 - - - - - mitochondrial ribosomal protein S26 [Source:NCBI gene;Acc:426561]
72. ATP5MC1 ENSGALG00000001330 37766 0.704 - - - - 0.704 - - - - - ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841]
73. TUBB2C TUBB2C 44249 0.703 0.703 - - - - - - - - -
74. SUCLG1 ENSGALG00000015961 14323 0.702 - - - - - - 0.702 - - - succinate-CoA ligase alpha subunit [Source:NCBI gene;Acc:422932]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA