Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for U1_3

Gene Name Gene ID Reads Annotation
U1_3 U1_3 1










Genes with expression patterns similar to U1_3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. AL928852.1 AL928852.1 23 1 - - - 1.000 - - - - -
2. gabrr1 ENSDARG00000043902 1 1 - - - 1.000 - - - - - gamma-aminobutyric acid (GABA) A receptor, rho 1 [Source:ZFIN;Acc:ZDB-GENE-040724-212]
3. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - 1.000 - - - - -
4. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - 1.000 - - - - -
5. si:dkey-30h14.3 si:dkey-30h14.3 1 1 - - - 1.000 - - - - -
6. ddx41_1 2 1 - - - 1.000 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
7. cdkn1bb_1 ENSDARG00000054271 5 1 - - - 1.000 - - - - - cyclin-dependent kinase inhibitor 1Bb [Source:ZFIN;Acc:ZDB-GENE-030521-13]
8. C2 C2 5 1 - - - 1.000 - - - - -
9. rfx3 ENSDARG00000014550 2 1 - - - 1.000 - - - - - regulatory factor X, 3 (influences HLA class II expression) [Source:ZFIN;Acc:ZDB-GENE-061103-253]
10. dhh ENSDARG00000037062 3 1 - - - 1.000 - - - - - desert hedgehog [Source:ZFIN;Acc:ZDB-GENE-990714-5]
11. cpb1 ENSDARG00000045442, ENSDARG00000110762 22 1 - - - 1.000 - - - - - carboxypeptidase B1 (tissue) [Source:ZFIN;Acc:ZDB-GENE-030131-1132]
12. si:ch211-67f13.7 ENSDARG00000077845 8 1 - - - 1.000 - - - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
13. ubald1a ENSDARG00000002362 181 1 - - - 1.000 - - - - - UBA-like domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040718-191]
14. TMEM55B TMEM55B 76 1 - - - 1.000 - - - - -
15. clrn1 ENSDARG00000102890 5 1 - - - 1.000 - - - - - clarin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-420]
16. si:dkey-14i17.1 si:dkey-14i17.1 1 1 - - - 1.000 - - - - -
17. si:ch211-147m20.1 si:ch211-147m20.1 6 1 - - - 1.000 - - - - -
18. U1_3 U1_3 1 1 - - - 1.000 - - - - -
19. hcn3 ENSDARG00000027192 6 0.981 - - - 0.981 - - - - - hyperpolarization activated cyclic nucleotide-gated potassium channel 3 [Source:ZFIN;Acc:ZDB-GENE-060503-193]
20. BX323793.3 BX323793.3 7 0.976 - - - 0.976 - - - - -
21. MCOLN2 ENSDARG00000098918 12 0.968 - - - 0.968 - - - - - mucolipin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-692]
22. ccdc147 ccdc147 39 0.959 - - - 0.959 - - - - -
23. si:dkey-276l13.5 si:dkey-276l13.5 3 0.941 - - - 0.941 - - - - -
24. U12 U12 14 0.941 - - - 0.941 - - - - -
25. GSTK1 ENSDARG00000056510 14 0.939 - - - 0.939 - - - - - glutathione S-transferase kappa 1 [Source:ZFIN;Acc:ZDB-GENE-040718-298]
26. HIST1H4L ENSDARG00000101249, ENSDARG00000105318, ENSDARG00000105352, ENSDARG00000105353, ENSDARG00000105376, ENSDARG00000105382, ENSDARG00000105409, ENSDARG00000105482, ENSDARG00000110035, ENSDARG00000110152, ENSDARG00000110812, ENSDARG00000111165, ENSDARG00000111247, ENSDARG00000111494, ENSDARG00000111501, ENSDARG00000111619, ENSDARG00000111753, ENSDARG00000112491, ENSDARG00000112528, ENSDARG00000112954, ENSDARG00000114534, ENSDARG00000115054, ENSDARG00000115281, ENSDARG00000115799, ENSDARG00000116781 3 0.929 - - - 0.929 - - - - - histone 1, H4, like [Source:ZFIN;Acc:ZDB-GENE-070927-10]
27. si:ch211-202m22.1 ENSDARG00000094491 24 0.921 - - - 0.921 - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
28. si:dkey-284e7.2 si:dkey-284e7.2 14 0.918 - - - 0.918 - - - - -
29. galca ENSDARG00000037064 12 0.891 - - - 0.891 - - - - - galactosylceramidase a [Source:ZFIN;Acc:ZDB-GENE-040724-243]
30. BX470154.1 ENSDARG00000097801 2 0.891 - - - 0.891 - - - - -
31. neu3.5 ENSDARG00000096368 5 0.889 - - - 0.889 - - - - - sialidase 3 (membrane sialidase), tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-071220-2]
32. C23H1orf192 C23H1orf192 60 0.878 - - - 0.878 - - - - -
33. rgs8 ENSDARG00000070037, ENSDARG00000111478 37 0.876 - - - 0.876 - - - - - regulator of G protein signaling 8 [Source:ZFIN;Acc:ZDB-GENE-040718-264]
34. INHBE INHBE 95 0.87 - - - 0.870 - - - - -
35. MDH1B ENSDARG00000018008 29 0.869 - - - 0.869 - - - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
36. cfhl5 ENSDARG00000105052 25 0.868 - - - 0.868 - - - - - complement factor H like 5 [Source:ZFIN;Acc:ZDB-GENE-050208-782]
37. BX470224.1 ENSDARG00000092793 22 0.854 - - - 0.854 - - - - -
38. si:dkey-229d2.7 ENSDARG00000092460 15 0.849 - - - 0.849 - - - - - si:dkey-229d2.7 [Source:ZFIN;Acc:ZDB-GENE-060526-265]
39. gdpd5a ENSDARG00000077284 3 0.837 - - - 0.837 - - - - - glycerophosphodiester phosphodiesterase domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-091204-253]
40. CABZ01081747.2 CABZ01081747.2 9 0.834 - - - 0.834 - - - - -
41. zgc:123068 ENSDARG00000017489 15 0.827 - - - 0.827 - - - - - zgc:123068 [Source:ZFIN;Acc:ZDB-GENE-051030-98]
42. FETUB ENSDARG00000053973 4 0.818 - - - 0.818 - - - - - fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
43. clic5b_1 ENSDARG00000070584 149 0.816 - - - 0.816 - - - - - chloride intracellular channel 5b [Source:ZFIN;Acc:ZDB-GENE-040426-2542]
44. CR848814.2 CR848814.2 19 0.81 - - - 0.810 - - - - -
45. plcg2 ENSDARG00000068763 102 0.81 - - - 0.810 - - - - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
46. si:ch211-196f5.2 ENSDARG00000041492 29 0.805 - - - 0.805 - - - - - si:ch211-196f5.2 [Source:ZFIN;Acc:ZDB-GENE-041014-306]
47. si:ch211-208k15.1 ENSDARG00000088650 11 0.792 - - - 0.792 - - - - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
48. PCMTD2 ENSDARG00000053820, ENSDARG00000113456 25 0.786 - - - 0.786 - - - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
49. rccd1_1 ENSDARG00000071074 24 0.782 - - - 0.782 - - - - - RCC1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3552]
50. si:dkey-14i17.2 si:dkey-14i17.2 10 0.772 - - - 0.772 - - - - -
51. ITGA2 ITGA2 40 0.767 - - - 0.767 - - - - -
52. nphs2 ENSDARG00000042850 31 0.757 - - - 0.757 - - - - - nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]
53. AK9 ENSDARG00000021913 53 0.743 - - - 0.743 - - - - - adenylate kinase 9 [Source:ZFIN;Acc:ZDB-GENE-041014-337]
54. tmem79a ENSDARG00000071250 48 0.74 - - - 0.740 - - - - - transmembrane protein 79a [Source:ZFIN;Acc:ZDB-GENE-060503-538]
55. slc1a9 ENSDARG00000098269 12 0.74 - - - 0.740 - - - - - solute carrier family 1 (glutamate transporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-101111-9]
56. col5a2b ENSDARG00000024847 17 0.731 - - - 0.731 - - - - - collagen, type V, alpha 2b [Source:ZFIN;Acc:ZDB-GENE-110406-2]
57. cpa4 ENSDARG00000043722 16 0.73 - - - 0.730 - - - - - carboxypeptidase A4 [Source:ZFIN;Acc:ZDB-GENE-040704-61]
58. lrit1a ENSDARG00000019179 9 0.73 - - - 0.730 - - - - - leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a [Source:ZFIN;Acc:ZDB-GENE-040924-5]
59. si:ch211-197g15.7 ENSDARG00000071355 26 0.721 - - - 0.721 - - - - - si:ch211-197g15.7 [Source:ZFIN;Acc:ZDB-GENE-030131-4763]
60. CAMKV CAMKV 11 0.721 - - - 0.721 - - - - -
61. CR762480.1 ENSDARG00000099580 17 0.718 - - - 0.718 - - - - -
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA