Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Tubb3

Gene Name Gene ID Reads Annotation
Tubb3 ENSMUSG00000062380 9211 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]







Genes with expression patterns similar to Tubb3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Tubb3 ENSMUSG00000062380 9211 6 1.000 1.000 1.000 1.000 1.000 1.000 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
2. Elavl4 ENSMUSG00000028546 6084 5.391 0.707 0.967 0.931 0.945 0.951 0.890 ELAV like RNA binding protein 4 [Source:MGI Symbol;Acc:MGI:107427]
3. Rtn1 ENSMUSG00000021087 2547 5.283 0.880 0.919 0.839 0.906 0.870 0.869 reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
4. Dcx ENSMUSG00000031285 1733 5.216 0.889 0.970 0.933 0.843 0.866 0.715 doublecortin [Source:MGI Symbol;Acc:MGI:1277171]
5. Elavl3 ENSMUSG00000003410 2830 5.208 0.963 0.816 0.782 0.944 0.850 0.853 ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
6. Elavl2 ENSMUSG00000008489 2109 5.16 0.885 0.929 0.854 0.875 0.789 0.828 ELAV like RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1100887]
7. Stmn2 ENSMUSG00000027500 6200 5.127 0.859 0.906 0.809 0.877 0.850 0.826 stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
8. Cadps ENSMUSG00000054423 870 5.123 0.894 0.878 0.828 0.883 0.810 0.830 Ca2+-dependent secretion activator [Source:MGI Symbol;Acc:MGI:1350922]
9. Myt1 ENSMUSG00000010505 661 5.094 0.796 0.849 0.864 0.903 0.821 0.861 myelin transcription factor 1 [Source:MGI Symbol;Acc:MGI:1100535]
10. Nhlh2 ENSMUSG00000048540 1310 5.017 0.835 0.854 0.968 0.825 0.815 0.720 nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
11. Stmn3 ENSMUSG00000027581 1327 4.959 0.870 0.860 0.820 0.871 0.797 0.741 stathmin-like 3 [Source:MGI Symbol;Acc:MGI:1277137]
12. Nefl ENSMUSG00000022055 4031 4.917 0.893 0.925 0.801 0.794 0.757 0.747 neurofilament, light polypeptide [Source:MGI Symbol;Acc:MGI:97313]
13. Apba2 ENSMUSG00000030519 840 4.874 0.838 0.776 0.933 0.789 0.805 0.733 amyloid beta (A4) precursor protein-binding, family A, member 2 [Source:MGI Symbol;Acc:MGI:1261791]
14. Nhlh1 ENSMUSG00000051251 2017 4.861 0.912 0.832 0.708 0.889 0.737 0.783 nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
15. Ina ENSMUSG00000034336 3835 4.831 0.862 0.910 0.740 0.815 0.723 0.781 internexin neuronal intermediate filament protein, alpha [Source:MGI Symbol;Acc:MGI:96568]
16. Tagln3 ENSMUSG00000022658 6054 4.414 - 0.872 0.819 0.928 0.907 0.888 transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
17. Neurod4 ENSMUSG00000048015 764 4.381 0.960 0.878 0.824 0.896 - 0.823 neurogenic differentiation 4 [Source:MGI Symbol;Acc:MGI:108055]
18. Tuba1a ENSMUSG00000072235 51129 4.297 - 0.766 0.830 0.941 0.898 0.862 tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
19. Celsr3 ENSMUSG00000023473, ENSMUSG00000107269 648 4.258 0.817 0.854 0.898 0.916 - 0.773 cadherin, EGF LAG seven-pass G-type receptor 3 [Source:MGI Symbol;Acc:MGI:1858236]
20. Gng3 ENSMUSG00000071658 2104 4.251 0.842 - 0.883 0.891 0.745 0.890 guanine nucleotide binding protein (G protein), gamma 3 [Source:MGI Symbol;Acc:MGI:102704]
21. Nefm ENSMUSG00000022054 2534 4.168 0.858 0.879 0.832 - 0.811 0.788 neurofilament, medium polypeptide [Source:MGI Symbol;Acc:MGI:97314]
22. Dpysl5 ENSMUSG00000029168 2096 4.153 0.881 - 0.865 0.861 0.838 0.708 dihydropyrimidinase-like 5 [Source:MGI Symbol;Acc:MGI:1929772]
23. Mllt11 ENSMUSG00000053192 1776 4.153 0.827 0.887 - 0.837 0.819 0.783 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 11 [Source:MGI Symbol;Acc:MGI:1929671]
24. Rundc3a ENSMUSG00000006575 421 4.124 0.817 0.875 - 0.791 0.829 0.812 RUN domain containing 3A [Source:MGI Symbol;Acc:MGI:1858752]
25. Map2 ENSMUSG00000015222 2576 4.123 0.865 0.876 - 0.862 0.793 0.727 microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
26. Fez1 ENSMUSG00000032118 2537 4.119 - 0.782 0.762 0.902 0.842 0.831 fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
27. Crmp1 ENSMUSG00000029121 3165 4.105 - 0.830 0.886 0.857 0.749 0.783 collapsin response mediator protein 1 [Source:MGI Symbol;Acc:MGI:107793]
28. Rufy3 ENSMUSG00000029291 695 4.101 0.772 0.882 - 0.787 0.834 0.826 RUN and FYVE domain containing 3 [Source:MGI Symbol;Acc:MGI:106484]
29. Trp53i11 ENSMUSG00000068735 15944 4.093 0.833 0.829 0.767 0.882 - 0.782 transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
30. Kif5c ENSMUSG00000026764 1283 3.908 - 0.716 0.855 0.784 0.819 0.734 kinesin family member 5C [Source:MGI Symbol;Acc:MGI:1098269]
31. Tmsb4x ENSMUSG00000049775 61014 3.847 0.743 - 0.708 0.887 0.721 0.788 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
32. Spock2 ENSMUSG00000058297 1096 3.84 0.735 0.746 - 0.763 0.837 0.759 sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 [Source:MGI Symbol;Acc:MGI:1891351]
33. Uchl1 ENSMUSG00000029223 2803 3.821 - 0.810 0.714 0.753 0.745 0.799 ubiquitin carboxy-terminal hydrolase L1 [Source:MGI Symbol;Acc:MGI:103149]
34. Ap3b2 ENSMUSG00000062444 565 3.797 0.730 0.726 - 0.841 0.772 0.728 adaptor-related protein complex 3, beta 2 subunit [Source:MGI Symbol;Acc:MGI:1100869]
35. D930028M14Rik ENSMUSG00000074274 452 3.797 0.854 0.823 - 0.702 0.716 0.702 RIKEN cDNA D930028M14 gene [Source:MGI Symbol;Acc:MGI:3687343]
36. Rhbdl3 ENSMUSG00000017692 783 3.782 0.721 0.757 - 0.799 0.717 0.788 rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
37. Akap6 ENSMUSG00000061603 420 3.752 0.723 0.727 - 0.778 0.759 0.765 A kinase (PRKA) anchor protein 6 [Source:MGI Symbol;Acc:MGI:3050566]
38. Gap43 ENSMUSG00000047261 5946 3.73 - 0.816 0.721 0.740 0.735 0.718 growth associated protein 43 [Source:MGI Symbol;Acc:MGI:95639]
39. Soga3 ENSMUSG00000038916 3972 3.441 - - 0.848 0.924 0.876 0.793 SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
40. Tubb2b ENSMUSG00000045136 41060 3.373 - - 0.815 0.939 0.793 0.826 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
41. St18 ENSMUSG00000033740 408 3.244 0.890 0.791 - 0.745 0.818 - suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
42. Scg3 ENSMUSG00000032181 445 3.23 0.824 0.813 - 0.832 0.761 - secretogranin III [Source:MGI Symbol;Acc:MGI:103032]
43. Sp8 ENSMUSG00000048562 219 3.211 0.903 - 0.825 - 0.747 0.736 trans-acting transcription factor 8 [Source:MGI Symbol;Acc:MGI:2443471]
44. Cdk5r1 ENSMUSG00000048895 2376 3.204 0.766 - - 0.872 0.760 0.806 cyclin-dependent kinase 5, regulatory subunit 1 (p35) [Source:MGI Symbol;Acc:MGI:101764]
45. Prmt8 ENSMUSG00000030350 342 3.193 0.744 0.750 0.926 0.773 - - protein arginine N-methyltransferase 8 [Source:MGI Symbol;Acc:MGI:3043083]
46. 2610017I09Rik 2610017I09Rik 1595 3.19 0.786 - - 0.846 0.822 0.736
47. Cadm1 ENSMUSG00000032076 15203 3.156 - 0.726 - 0.881 0.763 0.786 cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1889272]
48. Basp1 ENSMUSG00000045763 22946 3.131 - 0.728 - 0.820 0.820 0.763 brain abundant, membrane attached signal protein 1 [Source:MGI Symbol;Acc:MGI:1917600]
49. Apc2 ENSMUSG00000020135 328 3.115 - 0.827 - 0.727 0.779 0.782 adenomatosis polyposis coli 2 [Source:MGI Symbol;Acc:MGI:1346052]
50. Actl6b ENSMUSG00000029712 203 3.069 - 0.795 - 0.814 0.723 0.737 actin-like 6B [Source:MGI Symbol;Acc:MGI:1933548]
51. Acot7 ENSMUSG00000028937 5139 3.061 0.708 - 0.893 0.727 - 0.733 acyl-CoA thioesterase 7 [Source:MGI Symbol;Acc:MGI:1917275]
52. Nrarp ENSMUSG00000078202 1708 3.045 0.701 - 0.721 0.857 0.766 - Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
53. Snrpn ENSMUSG00000102252 2727 3.022 0.764 - 0.768 0.762 0.728 - small nuclear ribonucleoprotein N [Source:MGI Symbol;Acc:MGI:98347]
54. Rbfox3 ENSMUSG00000025576 384 3.018 - 0.785 - 0.724 0.703 0.806 RNA binding protein, fox-1 homolog (C. elegans) 3 [Source:MGI Symbol;Acc:MGI:106368]
55. Dpysl3 ENSMUSG00000024501 7004 2.954 - - 0.704 0.783 0.762 0.705 dihydropyrimidinase-like 3 [Source:MGI Symbol;Acc:MGI:1349762]
56. Neurod1 ENSMUSG00000034701 1390 2.94 0.705 - - 0.764 0.748 0.723 neurogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:1339708]
57. Sox2ot ENSMUSG00000105265 475 2.939 0.773 - 0.701 0.721 0.744 - SOX2 overlapping transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444112]
58. Map1b ENSMUSG00000052727 28977 2.501 - - - 0.951 0.847 0.703 microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
59. Mapk8ip2 ENSMUSG00000022619 910 2.467 - - - 0.870 0.829 0.768 mitogen-activated protein kinase 8 interacting protein 2 [Source:MGI Symbol;Acc:MGI:1926555]
60. Nova2 ENSMUSG00000030411 400 2.449 - 0.858 0.835 0.756 - - neuro-oncological ventral antigen 2 [Source:MGI Symbol;Acc:MGI:104296]
61. 9330159F19Rik ENSMUSG00000004360 464 2.441 0.824 - - - 0.805 0.812 RIKEN cDNA 9330159F19 gene [Source:MGI Symbol;Acc:MGI:3036239]
62. Srgap3 ENSMUSG00000030257 2941 2.436 0.804 - - 0.823 - 0.809 SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
63. Ebf1 ENSMUSG00000057098 3112 2.434 0.705 - - 0.906 0.823 - early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]
64. Trim2 ENSMUSG00000027993 3587 2.417 - - - 0.896 0.768 0.753 tripartite motif-containing 2 [Source:MGI Symbol;Acc:MGI:1933163]
65. Dll3 ENSMUSG00000003436 1086 2.412 0.834 0.789 0.789 - - - delta like canonical Notch ligand 3 [Source:MGI Symbol;Acc:MGI:1096877]
66. Ncan ENSMUSG00000002341 521 2.398 0.784 - - 0.820 0.794 - neurocan [Source:MGI Symbol;Acc:MGI:104694]
67. Nsg2 ENSMUSG00000020297 1718 2.357 0.777 - - 0.803 0.777 - neuron specific gene family member 2 [Source:MGI Symbol;Acc:MGI:1202070]
68. Btbd17 ENSMUSG00000000202 565 2.356 0.814 - - - 0.805 0.737 BTB (POZ) domain containing 17 [Source:MGI Symbol;Acc:MGI:1919264]
69. Neurog1 ENSMUSG00000048904 327 2.349 - - 0.794 0.849 0.706 - neurogenin 1 [Source:MGI Symbol;Acc:MGI:107754]
70. Prdm8 ENSMUSG00000035456 310 2.315 0.869 0.706 - 0.740 - - PR domain containing 8 [Source:MGI Symbol;Acc:MGI:1924880]
71. Ttyh1 ENSMUSG00000030428 279 2.284 - - - 0.838 0.746 0.700 tweety family member 1 [Source:MGI Symbol;Acc:MGI:1889007]
72. Snap25 ENSMUSG00000027273 427 2.284 - 0.756 - 0.730 0.798 - synaptosomal-associated protein 25 [Source:MGI Symbol;Acc:MGI:98331]
73. Nell2 ENSMUSG00000022454 870 2.283 0.754 0.778 - 0.751 - - NEL-like 2 [Source:MGI Symbol;Acc:MGI:1858510]
74. Pax6 ENSMUSG00000027168 2751 2.281 - - 0.703 0.795 0.783 - paired box 6 [Source:MGI Symbol;Acc:MGI:97490]
75. Sncg ENSMUSG00000023064 1702 2.275 - 0.841 - 0.720 0.714 - synuclein, gamma [Source:MGI Symbol;Acc:MGI:1298397]
76. Ckb ENSMUSG00000001270 8443 2.263 0.769 - 0.702 0.792 - - creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
77. Lhx4 ENSMUSG00000026468 214 2.26 0.718 0.773 0.769 - - - LIM homeobox protein 4 [Source:MGI Symbol;Acc:MGI:101776]
78. Ago1 ENSMUSG00000041530 7703 2.254 - - 0.785 0.747 0.722 - argonaute RISC catalytic subunit 1 [Source:MGI Symbol;Acc:MGI:2446630]
79. Dusp8 ENSMUSG00000037887 348 2.2 - - - 0.717 0.749 0.734 dual specificity phosphatase 8 [Source:MGI Symbol;Acc:MGI:106626]
80. Tubb4a ENSMUSG00000062591 500 2.181 0.707 0.768 - - - 0.706 tubulin, beta 4A class IVA [Source:MGI Symbol;Acc:MGI:107848]
81. Btg2 ENSMUSG00000020423 1222 2.181 0.717 - - 0.735 0.729 - B cell translocation gene 2, anti-proliferative [Source:MGI Symbol;Acc:MGI:108384]
82. Mapt ENSMUSG00000018411 1834 2.153 0.746 - 0.702 0.705 - - microtubule-associated protein tau [Source:MGI Symbol;Acc:MGI:97180]
83. Grm2 ENSMUSG00000023192 147 1.702 0.925 - - 0.777 - - glutamate receptor, metabotropic 2 [Source:MGI Symbol;Acc:MGI:1351339]
84. Onecut2 ENSMUSG00000045991 2334 1.68 0.887 0.793 - - - - one cut domain, family member 2 [Source:MGI Symbol;Acc:MGI:1891408]
85. Gm3764 ENSMUSG00000097156 474 1.675 - - - 0.856 0.819 - predicted gene 3764 [Source:MGI Symbol;Acc:MGI:3781938]
86. Fam171b ENSMUSG00000048388 2388 1.65 0.793 - - 0.857 - - family with sequence similarity 171, member B [Source:MGI Symbol;Acc:MGI:2444579]
87. Fgfbp3 ENSMUSG00000047632 2036 1.614 0.853 - - 0.761 - - fibroblast growth factor binding protein 3 [Source:MGI Symbol;Acc:MGI:1919764]
88. Lhx3 ENSMUSG00000026934 117 1.6 0.805 0.795 - - - - LIM homeobox protein 3 [Source:MGI Symbol;Acc:MGI:102673]
89. Gprin1 ENSMUSG00000069227 1013 1.599 - 0.803 - 0.796 - - G protein-regulated inducer of neurite outgrowth 1 [Source:MGI Symbol;Acc:MGI:1349455]
90. Nat8l ENSMUSG00000048142 281 1.586 0.764 - 0.822 - - - N-acetyltransferase 8-like [Source:MGI Symbol;Acc:MGI:2447776]
91. Nfasc ENSMUSG00000026442 356 1.581 0.819 0.762 - - - - neurofascin [Source:MGI Symbol;Acc:MGI:104753]
92. Kif5a ENSMUSG00000074657 425 1.578 - 0.811 - 0.767 - - kinesin family member 5A [Source:MGI Symbol;Acc:MGI:109564]
93. Gpr98 Gpr98 1797 1.57 - - - 0.862 - 0.708
94. Sptbn2 ENSMUSG00000067889 4571 1.57 - - - - 0.817 0.753 spectrin beta, non-erythrocytic 2 [Source:MGI Symbol;Acc:MGI:1313261]
95. RP24-113D21.1 RP24-113D21.1 685 1.568 - - - 0.723 - 0.845
96. Slc10a4 ENSMUSG00000029219 550 1.566 0.714 0.852 - - - - solute carrier family 10 (sodium/bile acid cotransporter family), member 4 [Source:MGI Symbol;Acc:MGI:3606480]
97. Isl2 ENSMUSG00000032318 488 1.565 0.768 0.797 - - - - insulin related protein 2 (islet 2) [Source:MGI Symbol;Acc:MGI:109156]
98. Syn1 ENSMUSG00000037217 289 1.563 - - - 0.760 - 0.803 synapsin I [Source:MGI Symbol;Acc:MGI:98460]
99. Olig2 ENSMUSG00000039830 329 1.562 0.765 0.797 - - - - oligodendrocyte transcription factor 2 [Source:MGI Symbol;Acc:MGI:1355331]
100. Pou3f3 ENSMUSG00000045515 5137 1.551 - - 0.798 0.753 - - POU domain, class 3, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102564]

There are 173 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA