Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Ttr

Gene Name Gene ID Reads Annotation
Ttr ENSMUSG00000061808 1351 transthyretin [Source:MGI Symbol;Acc:MGI:98865]







Genes with expression patterns similar to Ttr

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Ttr ENSMUSG00000061808 1351 6 1.000 1.000 1.000 1.000 1.000 1.000 transthyretin [Source:MGI Symbol;Acc:MGI:98865]
2. Ambp ENSMUSG00000028356 362 4.21 0.896 0.810 0.857 0.830 0.817 - alpha 1 microglobulin/bikunin [Source:MGI Symbol;Acc:MGI:88002]
3. Serpina1b ENSMUSG00000071178 482 3.942 0.786 0.715 0.854 0.876 0.711 - serine (or cysteine) preptidase inhibitor, clade A, member 1B [Source:MGI Symbol;Acc:MGI:891970]
4. Rbp4 ENSMUSG00000024990 1171 3.435 0.774 0.943 - 0.908 0.810 - retinol binding protein 4, plasma [Source:MGI Symbol;Acc:MGI:97879]
5. Itih2 ENSMUSG00000037254 468 2.535 0.868 - - 0.765 0.902 - inter-alpha trypsin inhibitor, heavy chain 2 [Source:MGI Symbol;Acc:MGI:96619]
6. Serpinf2 ENSMUSG00000038224 452 2.476 0.870 0.884 - 0.722 - - serine (or cysteine) peptidase inhibitor, clade F, member 2 [Source:MGI Symbol;Acc:MGI:107173]
7. Fgb ENSMUSG00000033831 418 2.47 0.801 - - 0.866 0.803 - fibrinogen beta chain [Source:MGI Symbol;Acc:MGI:99501]
8. Serpinc1 ENSMUSG00000026715 40 2.438 0.794 - - 0.719 0.925 - serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1 [Source:MGI Symbol;Acc:MGI:88095]
9. Gulo ENSMUSG00000034450 92 2.356 0.729 - 0.756 - 0.871 - gulonolactone (L-) oxidase [Source:MGI Symbol;Acc:MGI:1353434]
10. Afp ENSMUSG00000054932 3253 1.76 0.905 - - 0.855 - - alpha fetoprotein [Source:MGI Symbol;Acc:MGI:87951]
11. Alb ENSMUSG00000029368 370 1.739 - - - 0.807 0.932 - albumin [Source:MGI Symbol;Acc:MGI:87991]
12. Serpina1d ENSMUSG00000071177 146 1.695 - 0.920 - 0.775 - - serine (or cysteine) peptidase inhibitor, clade A, member 1D [Source:MGI Symbol;Acc:MGI:891968]
13. Serpina6 ENSMUSG00000060807 442 1.692 - - - 0.859 0.833 - serine (or cysteine) peptidase inhibitor, clade A, member 6 [Source:MGI Symbol;Acc:MGI:88278]
14. Cpn1 ENSMUSG00000025196 150 1.691 - 0.878 0.813 - - - carboxypeptidase N, polypeptide 1 [Source:MGI Symbol;Acc:MGI:2135874]
15. Serpina1a ENSMUSG00000066366 88 1.668 - - - 0.771 0.897 - serine (or cysteine) peptidase inhibitor, clade A, member 1A [Source:MGI Symbol;Acc:MGI:891971]
16. Hnf4a ENSMUSG00000017950 358 1.567 - - - 0.848 0.719 - hepatic nuclear factor 4, alpha [Source:MGI Symbol;Acc:MGI:109128]
17. Apoa1 ENSMUSG00000032083 306 1.524 - 0.703 - 0.821 - - apolipoprotein A-I [Source:MGI Symbol;Acc:MGI:88049]
18. Nepn ENSMUSG00000038624 1442 1.498 - 0.751 0.747 - - - nephrocan [Source:MGI Symbol;Acc:MGI:1913900]
19. Tdh ENSMUSG00000021953 82 0.957 - 0.957 - - - - L-threonine dehydrogenase [Source:MGI Symbol;Acc:MGI:1926231]
20. Phox2b ENSMUSG00000012520 407 0.939 0.939 - - - - - paired-like homeobox 2b [Source:MGI Symbol;Acc:MGI:1100882]
21. Habp2 ENSMUSG00000025075 134 0.928 - 0.928 - - - - hyaluronic acid binding protein 2 [Source:MGI Symbol;Acc:MGI:1196378]
22. Sp7 ENSMUSG00000060284 33 0.893 - - - - 0.893 - Sp7 transcription factor 7 [Source:MGI Symbol;Acc:MGI:2153568]
23. Serpina1c ENSMUSG00000079015 186 0.874 - 0.874 - - - - serine (or cysteine) peptidase inhibitor, clade A, member 1C [Source:MGI Symbol;Acc:MGI:891969]
24. Dio3 ENSMUSG00000075707 50 0.872 - 0.872 - - - - deiodinase, iodothyronine type III [Source:MGI Symbol;Acc:MGI:1306782]
25. Apoa2 ENSMUSG00000005681 228 0.858 - - - 0.858 - - apolipoprotein A-II [Source:MGI Symbol;Acc:MGI:88050]
26. Tbx20 ENSMUSG00000031965 344 0.854 - - - - 0.854 - T-box 20 [Source:MGI Symbol;Acc:MGI:1888496]
27. Apoe ENSMUSG00000002985 3873 0.851 - - - 0.851 - - apolipoprotein E [Source:MGI Symbol;Acc:MGI:88057]
28. Gstm1 ENSMUSG00000058135 3606 0.843 - - - 0.843 - - glutathione S-transferase, mu 1 [Source:MGI Symbol;Acc:MGI:95860]
29. Ptger3 ENSMUSG00000040016 181 0.841 - - - - 0.841 - prostaglandin E receptor 3 (subtype EP3) [Source:MGI Symbol;Acc:MGI:97795]
30. Glud1 ENSMUSG00000021794 6385 0.82 - - - 0.820 - - glutamate dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:95753]
31. Gpr50 ENSMUSG00000056380 58 0.813 - 0.813 - - - - G-protein-coupled receptor 50 [Source:MGI Symbol;Acc:MGI:1333877]
32. BC027582 BC027582 61 0.812 0.812 - - - - -
33. Dpp4 ENSMUSG00000035000 65 0.81 - - - - 0.810 - dipeptidylpeptidase 4 [Source:MGI Symbol;Acc:MGI:94919]
34. Arhgap6 ENSMUSG00000031355 260 0.809 - - - - 0.809 - Rho GTPase activating protein 6 [Source:MGI Symbol;Acc:MGI:1196332]
35. Col8a2 ENSMUSG00000056174 221 0.806 0.806 - - - - - collagen, type VIII, alpha 2 [Source:MGI Symbol;Acc:MGI:88464]
36. Lum ENSMUSG00000036446 1992 0.802 - - - - 0.802 - lumican [Source:MGI Symbol;Acc:MGI:109347]
37. Slc38a5 ENSMUSG00000031170 364 0.801 - - 0.801 - - - solute carrier family 38, member 5 [Source:MGI Symbol;Acc:MGI:2148066]
38. Mt1 ENSMUSG00000031765 1970 0.801 - - - 0.801 - - metallothionein 1 [Source:MGI Symbol;Acc:MGI:97171]
39. Trf ENSMUSG00000032554 359 0.801 - - - 0.801 - - transferrin [Source:MGI Symbol;Acc:MGI:98821]
40. Hbb-bs ENSMUSG00000052305 2551 0.801 - - - 0.801 - - hemoglobin, beta adult s chain [Source:MGI Symbol;Acc:MGI:5474852]
41. Srgn ENSMUSG00000020077 553 0.798 - - - 0.798 - - serglycin [Source:MGI Symbol;Acc:MGI:97756]
42. Nkx2-3 ENSMUSG00000044220 594 0.798 - - 0.798 - - - NK2 homeobox 3 [Source:MGI Symbol;Acc:MGI:97348]
43. 2210019I11Rik 10 0.796 - - 0.796 - - - RIKEN cDNA 2210019I11 gene
44. Gata1 ENSMUSG00000031162 328 0.795 - - - 0.795 - - GATA binding protein 1 [Source:MGI Symbol;Acc:MGI:95661]
45. 2010300C02Rik ENSMUSG00000026090 21 0.794 - - 0.794 - - - RIKEN cDNA 2010300C02 gene [Source:MGI Symbol;Acc:MGI:1919347]
46. Serpinb10 ENSMUSG00000092572 51 0.793 - - - - 0.793 - serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 10 [Source:MGI Symbol;Acc:MGI:2138648]
47. Pyy ENSMUSG00000017311 148 0.792 - - 0.792 - - - peptide YY [Source:MGI Symbol;Acc:MGI:99924]
48. Naip6 ENSMUSG00000078942 18 0.79 - - - - 0.790 - NLR family, apoptosis inhibitory protein 6 [Source:MGI Symbol;Acc:MGI:1298222]
49. Ociad2 ENSMUSG00000029153 569 0.79 - 0.790 - - - - OCIA domain containing 2 [Source:MGI Symbol;Acc:MGI:1916377]
50. Samsn1 ENSMUSG00000022876 406 0.788 - - - - 0.788 - SAM domain, SH3 domain and nuclear localization signals, 1 [Source:MGI Symbol;Acc:MGI:1914992]
51. Clic6 ENSMUSG00000022949 78 0.785 - 0.785 - - - - chloride intracellular channel 6 [Source:MGI Symbol;Acc:MGI:2146607]
52. Casp1 ENSMUSG00000025888 13 0.785 0.785 - - - - - caspase 1 [Source:MGI Symbol;Acc:MGI:96544]
53. Htr3a ENSMUSG00000032269 11 0.785 0.785 - - - - - 5-hydroxytryptamine (serotonin) receptor 3A [Source:MGI Symbol;Acc:MGI:96282]
54. Postn ENSMUSG00000027750 3911 0.784 - - - - 0.784 - periostin, osteoblast specific factor [Source:MGI Symbol;Acc:MGI:1926321]
55. Gpr182 ENSMUSG00000058396 41 0.782 - - - - 0.782 - G protein-coupled receptor 182 [Source:MGI Symbol;Acc:MGI:109545]
56. Fga ENSMUSG00000028001 637 0.781 - - - 0.781 - - fibrinogen alpha chain [Source:MGI Symbol;Acc:MGI:1316726]
57. 1810019J16Rik 1810019J16Rik 121 0.78 - - 0.780 - - -
58. Chrm2 ENSMUSG00000045613 27 0.778 - - - - - 0.778 cholinergic receptor, muscarinic 2, cardiac [Source:MGI Symbol;Acc:MGI:88397]
59. Col1a2 ENSMUSG00000029661 27258 0.778 - - - - 0.778 - collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
60. Gcg ENSMUSG00000000394 648 0.777 - - 0.777 - - - glucagon [Source:MGI Symbol;Acc:MGI:95674]
61. Lhx6 ENSMUSG00000026890 107 0.772 - - - - - 0.772 LIM homeobox protein 6 [Source:MGI Symbol;Acc:MGI:1306803]
62. Cited4 ENSMUSG00000070803 736 0.771 - - - 0.771 - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4 [Source:MGI Symbol;Acc:MGI:1861694]
63. Gm15675 ENSMUSG00000086825 137 0.771 - - - - - 0.771 predicted gene 15675 [Source:MGI Symbol;Acc:MGI:3783117]
64. Cybrd1 ENSMUSG00000027015 70 0.77 - - - - 0.770 - cytochrome b reductase 1 [Source:MGI Symbol;Acc:MGI:2654575]
65. Kcnj2 ENSMUSG00000041695 109 0.768 - - - - - 0.768 potassium inwardly-rectifying channel, subfamily J, member 2 [Source:MGI Symbol;Acc:MGI:104744]
66. Clu ENSMUSG00000022037 250 0.768 - - - - 0.768 - clusterin [Source:MGI Symbol;Acc:MGI:88423]
67. Gna14 ENSMUSG00000024697 99 0.763 - - 0.763 - - - guanine nucleotide binding protein, alpha 14 [Source:MGI Symbol;Acc:MGI:95769]
68. Rgn ENSMUSG00000023070 86 0.763 - 0.763 - - - - regucalcin [Source:MGI Symbol;Acc:MGI:108024]
69. Col1a1 ENSMUSG00000001506 38394 0.762 - - - - 0.762 - collagen, type I, alpha 1 [Source:MGI Symbol;Acc:MGI:88467]
70. Sord ENSMUSG00000027227 1821 0.761 - - - 0.761 - - sorbitol dehydrogenase [Source:MGI Symbol;Acc:MGI:98266]
71. Lyve1 ENSMUSG00000030787 184 0.761 - - - 0.761 - - lymphatic vessel endothelial hyaluronan receptor 1 [Source:MGI Symbol;Acc:MGI:2136348]
72. Abcc8 ENSMUSG00000040136 63 0.76 - - 0.760 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 8 [Source:MGI Symbol;Acc:MGI:1352629]
73. Pcsk2 ENSMUSG00000027419 185 0.757 - - 0.757 - - - proprotein convertase subtilisin/kexin type 2 [Source:MGI Symbol;Acc:MGI:97512]
74. Pf4 ENSMUSG00000029373 3019 0.757 - - - 0.757 - - platelet factor 4 [Source:MGI Symbol;Acc:MGI:1888711]
75. Fermt3 ENSMUSG00000024965 174 0.756 - - - 0.756 - - fermitin family member 3 [Source:MGI Symbol;Acc:MGI:2147790]
76. Slc29a1 ENSMUSG00000023942 2102 0.755 - - - 0.755 - - solute carrier family 29 (nucleoside transporters), member 1 [Source:MGI Symbol;Acc:MGI:1927073]
77. Sowahb ENSMUSG00000045314 155 0.755 0.755 - - - - - sosondowah ankyrin repeat domain family member B [Source:MGI Symbol;Acc:MGI:1925338]
78. Fgg ENSMUSG00000033860 103 0.755 0.755 - - - - - fibrinogen gamma chain [Source:MGI Symbol;Acc:MGI:95526]
79. Irs4 ENSMUSG00000054667 52 0.754 - - 0.754 - - - insulin receptor substrate 4 [Source:MGI Symbol;Acc:MGI:1338009]
80. Gm16070 ENSMUSG00000085125 40 0.752 - - - - 0.752 - predicted gene 16070 [Source:MGI Symbol;Acc:MGI:3801761]
81. Nr1h5 ENSMUSG00000048938 448 0.751 - - 0.751 - - - nuclear receptor subfamily 1, group H, member 5 [Source:MGI Symbol;Acc:MGI:3026618]
82. 1700026L06Rik 1700026L06Rik 37 0.75 0.750 - - - - -
83. Ntsr1 ENSMUSG00000027568 69 0.749 - - 0.749 - - - neurotensin receptor 1 [Source:MGI Symbol;Acc:MGI:97386]
84. Mt2 ENSMUSG00000031762 1817 0.749 - - - 0.749 - - metallothionein 2 [Source:MGI Symbol;Acc:MGI:97172]
85. Car2 ENSMUSG00000027562 1176 0.745 - - - 0.745 - - carbonic anhydrase 2 [Source:MGI Symbol;Acc:MGI:88269]
86. Tcf21 ENSMUSG00000045680 410 0.745 - - 0.745 - - - transcription factor 21 [Source:MGI Symbol;Acc:MGI:1202715]
87. Frmpd3 ENSMUSG00000042425 28 0.744 0.744 - - - - - FERM and PDZ domain containing 3 [Source:MGI Symbol;Acc:MGI:3646547]
88. Rfx6 ENSMUSG00000019900 46 0.741 - 0.741 - - - - regulatory factor X, 6 [Source:MGI Symbol;Acc:MGI:2445208]
89. Lgals2 ENSMUSG00000043501 95 0.739 - 0.739 - - - - lectin, galactose-binding, soluble 2 [Source:MGI Symbol;Acc:MGI:895068]
90. Nt5e ENSMUSG00000032420 51 0.738 - - - - 0.738 - 5' nucleotidase, ecto [Source:MGI Symbol;Acc:MGI:99782]
91. Gm20467 ENSMUSG00000092250 33 0.736 - - 0.736 - - - predicted gene 20467 [Source:MGI Symbol;Acc:MGI:5141932]
92. Vtn ENSMUSG00000017344 397 0.736 - - - 0.736 - - vitronectin [Source:MGI Symbol;Acc:MGI:98940]
93. Serpina1e ENSMUSG00000072849 229 0.735 - - - 0.735 - - serine (or cysteine) peptidase inhibitor, clade A, member 1E [Source:MGI Symbol;Acc:MGI:891967]
94. Chrdl1 ENSMUSG00000031283 197 0.735 0.735 - - - - - chordin-like 1 [Source:MGI Symbol;Acc:MGI:1933172]
95. Gc ENSMUSG00000035540 20 0.733 - - 0.733 - - - vitamin D binding protein [Source:MGI Symbol;Acc:MGI:95669]
96. Lrrc51 ENSMUSG00000064307 63 0.733 0.733 - - - - - leucine rich repeat containing 51 [Source:MGI Symbol;Acc:MGI:1916608]
97. Pnoc ENSMUSG00000045731 104 0.732 - - - - 0.732 - prepronociceptin [Source:MGI Symbol;Acc:MGI:105308]
98. Ncmap ENSMUSG00000043924 17 0.731 - 0.731 - - - - noncompact myelin associated protein [Source:MGI Symbol;Acc:MGI:2444888]
99. Gm15915 ENSMUSG00000085723 101 0.731 - - - 0.731 - - predicted gene 15915 [Source:MGI Symbol;Acc:MGI:3801763]
100. Gabrp ENSMUSG00000020159 21 0.731 - - - - - 0.731 gamma-aminobutyric acid (GABA) A receptor, pi [Source:MGI Symbol;Acc:MGI:2387597]

There are 33 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA