Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Trub2

Gene Name Gene ID Reads Annotation
Trub2 ENSMUSG00000039826 782 TruB pseudouridine (psi) synthase family member 2 [Source:MGI Symbol;Acc:MGI:2442186]







Genes with expression patterns similar to Trub2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Trub2 ENSMUSG00000039826 782 6 1.000 1.000 1.000 1.000 1.000 1.000 TruB pseudouridine (psi) synthase family member 2 [Source:MGI Symbol;Acc:MGI:2442186]
2. Gm26869 ENSMUSG00000097879 104 1.568 - 0.864 - - 0.704 - predicted gene, 26869 [Source:MGI Symbol;Acc:MGI:5477363]
3. Agpat1 ENSMUSG00000034254 440 0.907 - 0.907 - - - - 1-acylglycerol-3-phosphate O-acyltransferase 1 (lysophosphatidic acid acyltransferase, alpha) [Source:MGI Symbol;Acc:MGI:1932075]
4. Scamp2 ENSMUSG00000040188 1163 0.9 - 0.900 - - - - secretory carrier membrane protein 2 [Source:MGI Symbol;Acc:MGI:1346518]
5. Emc1 ENSMUSG00000078517 293 0.898 - 0.898 - - - - ER membrane protein complex subunit 1 [Source:MGI Symbol;Acc:MGI:2443696]
6. Mlycd ENSMUSG00000074064 268 0.898 - 0.898 - - - - malonyl-CoA decarboxylase [Source:MGI Symbol;Acc:MGI:1928485]
7. Alx3 ENSMUSG00000014603 384 0.894 - 0.894 - - - - aristaless-like homeobox 3 [Source:MGI Symbol;Acc:MGI:1277097]
8. Mtmr3 ENSMUSG00000034354 1240 0.892 - 0.892 - - - - myotubularin related protein 3 [Source:MGI Symbol;Acc:MGI:1921552]
9. Wash Wash 803 0.885 - 0.885 - - - -
10. Hexdc ENSMUSG00000039307 420 0.879 - 0.879 - - - - hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing [Source:MGI Symbol;Acc:MGI:3605542]
11. Smad7 ENSMUSG00000025880 384 0.876 - 0.876 - - - - SMAD family member 7 [Source:MGI Symbol;Acc:MGI:1100518]
12. Mpdu1 ENSMUSG00000018761 888 0.873 - 0.873 - - - - mannose-P-dolichol utilization defect 1 [Source:MGI Symbol;Acc:MGI:1346040]
13. Afmid ENSMUSG00000017718 252 0.871 - 0.871 - - - - arylformamidase [Source:MGI Symbol;Acc:MGI:2448704]
14. Leprotl1 ENSMUSG00000031513 1832 0.871 - 0.871 - - - - leptin receptor overlapping transcript-like 1 [Source:MGI Symbol;Acc:MGI:1915442]
15. Gm13422 ENSMUSG00000084098 313 0.867 - 0.867 - - - - predicted gene 13422 [Source:MGI Symbol;Acc:MGI:3650167]
16. Snap23 ENSMUSG00000027287 1315 0.867 - 0.867 - - - - synaptosomal-associated protein 23 [Source:MGI Symbol;Acc:MGI:109356]
17. Vat1l ENSMUSG00000046844 448 0.867 - 0.867 - - - - vesicle amine transport protein 1 like [Source:MGI Symbol;Acc:MGI:2142534]
18. Ank1 ENSMUSG00000031543 443 0.866 - 0.866 - - - - ankyrin 1, erythroid [Source:MGI Symbol;Acc:MGI:88024]
19. Snora23 ENSMUSG00000064451 53 0.865 - 0.865 - - - - small nucleolar RNA, H/ACA box 23 [Source:MGI Symbol;Acc:MGI:3819494]
20. Ctla2b ENSMUSG00000074874 66 0.865 - 0.865 - - - - cytotoxic T lymphocyte-associated protein 2 beta [Source:MGI Symbol;Acc:MGI:88555]
21. Snx5 ENSMUSG00000027423 3464 0.865 - 0.865 - - - - sorting nexin 5 [Source:MGI Symbol;Acc:MGI:1916428]
22. BC027582 BC027582 61 0.865 - 0.865 - - - -
23. Celf3 ENSMUSG00000028137 141 0.864 - 0.864 - - - - CUGBP, Elav-like family member 3 [Source:MGI Symbol;Acc:MGI:1926034]
24. Eef1a2 ENSMUSG00000016349 41 0.863 - 0.863 - - - - eukaryotic translation elongation factor 1 alpha 2 [Source:MGI Symbol;Acc:MGI:1096317]
25. Xrn1 ENSMUSG00000032410 667 0.863 - 0.863 - - - - 5'-3' exoribonuclease 1 [Source:MGI Symbol;Acc:MGI:891964]
26. Zc3h14 ENSMUSG00000021012 1270 0.862 - 0.862 - - - - zinc finger CCCH type containing 14 [Source:MGI Symbol;Acc:MGI:1919824]
27. Thsd1 ENSMUSG00000031480 416 0.862 - 0.862 - - - - thrombospondin, type I, domain 1 [Source:MGI Symbol;Acc:MGI:1929096]
28. Gm15954 Gm15954 49 0.862 - 0.862 - - - -
29. Cgrrf1 ENSMUSG00000055128 994 0.861 - 0.861 - - - - cell growth regulator with ring finger domain 1 [Source:MGI Symbol;Acc:MGI:1916368]
30. Ccr5 ENSMUSG00000079227 87 0.86 - 0.860 - - - - chemokine (C-C motif) receptor 5 [Source:MGI Symbol;Acc:MGI:107182]
31. Lman2l ENSMUSG00000001143 1103 0.86 - 0.860 - - - - lectin, mannose-binding 2-like [Source:MGI Symbol;Acc:MGI:2443010]
32. Alg8 ENSMUSG00000035704 1502 0.86 - 0.860 - - - - asparagine-linked glycosylation 8 (alpha-1,3-glucosyltransferase) [Source:MGI Symbol;Acc:MGI:2141959]
33. Pld1 ENSMUSG00000027695 229 0.859 - 0.859 - - - - phospholipase D1 [Source:MGI Symbol;Acc:MGI:109585]
34. Pls1 ENSMUSG00000049493 175 0.859 - 0.859 - - - - plastin 1 (I-isoform) [Source:MGI Symbol;Acc:MGI:104809]
35. Gm11539 ENSMUSG00000083337 746 0.859 - 0.859 - - - - predicted gene 11539 [Source:MGI Symbol;Acc:MGI:3651911]
36. Khnyn ENSMUSG00000047153 196 0.859 - 0.859 - - - - KH and NYN domain containing [Source:MGI Symbol;Acc:MGI:2451333]
37. Mcmdc2 ENSMUSG00000046101 117 0.858 - 0.858 - - - - minichromosome maintenance domain containing 2 [Source:MGI Symbol;Acc:MGI:3045334]
38. Stim1 ENSMUSG00000030987 220 0.857 - 0.857 - - - - stromal interaction molecule 1 [Source:MGI Symbol;Acc:MGI:107476]
39. Golph3l ENSMUSG00000046519 687 0.857 - 0.857 - - - - golgi phosphoprotein 3-like [Source:MGI Symbol;Acc:MGI:1917129]
40. Abhd5 ENSMUSG00000032540 461 0.857 - 0.857 - - - - abhydrolase domain containing 5 [Source:MGI Symbol;Acc:MGI:1914719]
41. Ndst2 ENSMUSG00000039308 402 0.856 - 0.856 - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 [Source:MGI Symbol;Acc:MGI:97040]
42. Stc2 ENSMUSG00000020303 138 0.855 - 0.855 - - - - stanniocalcin 2 [Source:MGI Symbol;Acc:MGI:1316731]
43. Mettl7a3 ENSMUSG00000058057 214 0.854 - 0.854 - - - - methyltransferase like 7A3 [Source:MGI Symbol;Acc:MGI:3710670]
44. Med22 ENSMUSG00000015776 736 0.854 - 0.854 - - - - mediator complex subunit 22 [Source:MGI Symbol;Acc:MGI:98446]
45. Trip10 ENSMUSG00000019487 485 0.852 - 0.852 - - - - thyroid hormone receptor interactor 10 [Source:MGI Symbol;Acc:MGI:2146901]
46. Wwc1 ENSMUSG00000018849 410 0.852 - 0.852 - - - - WW, C2 and coiled-coil domain containing 1 [Source:MGI Symbol;Acc:MGI:2388637]
47. Phf12 ENSMUSG00000037791 554 0.852 - 0.852 - - - - PHD finger protein 12 [Source:MGI Symbol;Acc:MGI:1924057]
48. Gm13033 ENSMUSG00000083816 71 0.851 - 0.851 - - - - predicted gene 13033 [Source:MGI Symbol;Acc:MGI:3649305]
49. Nol9 ENSMUSG00000028948 3331 0.851 - 0.851 - - - - nucleolar protein 9 [Source:MGI Symbol;Acc:MGI:1921285]
50. Upk1a ENSMUSG00000006313 293 0.849 - 0.849 - - - - uroplakin 1A [Source:MGI Symbol;Acc:MGI:98911]
51. Rep15 ENSMUSG00000040121 131 0.848 - 0.848 - - - - RAB15 effector protein [Source:MGI Symbol;Acc:MGI:1913782]
52. Rnasel ENSMUSG00000066800 396 0.848 - 0.848 - - - - ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) [Source:MGI Symbol;Acc:MGI:1098272]
53. Mavs ENSMUSG00000037523 581 0.848 - 0.848 - - - - mitochondrial antiviral signaling protein [Source:MGI Symbol;Acc:MGI:2444773]
54. Atp5d ENSMUSG00000003072 10613 0.848 - 0.848 - - - - ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit [Source:MGI Symbol;Acc:MGI:1913293]
55. Ninj1 ENSMUSG00000037966 493 0.846 - 0.846 - - - - ninjurin 1 [Source:MGI Symbol;Acc:MGI:1196617]
56. Gm10068 Gm10068 399 0.846 - 0.846 - - - -
57. Gas2l1 ENSMUSG00000034201 605 0.845 - 0.845 - - - - growth arrest-specific 2 like 1 [Source:MGI Symbol;Acc:MGI:1926176]
58. Bnip2 ENSMUSG00000011958 2450 0.845 - 0.845 - - - - BCL2/adenovirus E1B interacting protein 2 [Source:MGI Symbol;Acc:MGI:109327]
59. Ankrd44 ENSMUSG00000052331 984 0.845 - 0.845 - - - - ankyrin repeat domain 44 [Source:MGI Symbol;Acc:MGI:3045243]
60. Bod1l ENSMUSG00000061755 2689 0.844 - 0.844 - - - - biorientation of chromosomes in cell division 1-like [Source:MGI Symbol;Acc:MGI:2444804]
61. Mcu ENSMUSG00000009647 477 0.844 - 0.844 - - - - mitochondrial calcium uniporter [Source:MGI Symbol;Acc:MGI:3026965]
62. Gm16287 ENSMUSG00000073739 273 0.844 - 0.844 - - - - predicted gene 16287 [Source:MGI Symbol;Acc:MGI:3650322]
63. A130010J15Rik ENSMUSG00000079144 763 0.843 - 0.843 - - - - RIKEN cDNA A130010J15 gene [Source:MGI Symbol;Acc:MGI:2441776]
64. Pmm2 ENSMUSG00000022711 580 0.843 - 0.843 - - - - phosphomannomutase 2 [Source:MGI Symbol;Acc:MGI:1859214]
65. Gm14227 ENSMUSG00000082596 93 0.841 - 0.841 - - - - predicted gene 14227 [Source:MGI Symbol;Acc:MGI:3649437]
66. Lad1 ENSMUSG00000041782 339 0.841 - 0.841 - - - - ladinin [Source:MGI Symbol;Acc:MGI:109343]
67. Ndel1 ENSMUSG00000018736 3400 0.84 - 0.840 - - - - nudE neurodevelopment protein 1 like 1 [Source:MGI Symbol;Acc:MGI:1932915]
68. Ccbl1 Ccbl1 330 0.84 - 0.840 - - - -
69. Tmsb15b1 ENSMUSG00000089768 199 0.839 - 0.839 - - - - thymosin beta 15b1 [Source:MGI Symbol;Acc:MGI:3843059]
70. Zbtb34 ENSMUSG00000068966 835 0.838 - 0.838 - - - - zinc finger and BTB domain containing 34 [Source:MGI Symbol;Acc:MGI:2685195]
71. Ercc6 ENSMUSG00000054051 674 0.838 - 0.838 - - - - excision repair cross-complementing rodent repair deficiency, complementation group 6 [Source:MGI Symbol;Acc:MGI:1100494]
72. Trmt10c ENSMUSG00000044763 662 0.837 - 0.837 - - - - tRNA methyltransferase 10C [Source:MGI Symbol;Acc:MGI:1196261]
73. Tmem68 ENSMUSG00000028232 669 0.837 - 0.837 - - - - transmembrane protein 68 [Source:MGI Symbol;Acc:MGI:1919348]
74. B3gntl1 ENSMUSG00000046605 165 0.837 - 0.837 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1 [Source:MGI Symbol;Acc:MGI:2441705]
75. Med8 ENSMUSG00000006392 1655 0.836 - 0.836 - - - - mediator complex subunit 8 [Source:MGI Symbol;Acc:MGI:1915269]
76. Dusp23 ENSMUSG00000026544 310 0.835 - 0.835 - - - - dual specificity phosphatase 23 [Source:MGI Symbol;Acc:MGI:1915690]
77. Dlx2 ENSMUSG00000023391 429 0.834 - 0.834 - - - - distal-less homeobox 2 [Source:MGI Symbol;Acc:MGI:94902]
78. Ntn3 661 0.834 - 0.834 - - - - netrin 3
79. Camta2 ENSMUSG00000040712 520 0.834 - 0.834 - - - - calmodulin binding transcription activator 2 [Source:MGI Symbol;Acc:MGI:2135957]
80. Mbd1 ENSMUSG00000024561 619 0.834 - 0.834 - - - - methyl-CpG binding domain protein 1 [Source:MGI Symbol;Acc:MGI:1333811]
81. Tmem159 ENSMUSG00000030917 409 0.833 - 0.833 - - - - transmembrane protein 159 [Source:MGI Symbol;Acc:MGI:1925752]
82. Zfp445 ENSMUSG00000047036 205 0.833 - 0.833 - - - - zinc finger protein 445 [Source:MGI Symbol;Acc:MGI:2143340]
83. Hist1h4i ENSMUSG00000060639 582 0.833 - 0.833 - - - - histone cluster 1, H4i [Source:MGI Symbol;Acc:MGI:2448432]
84. Pabpn1 ENSMUSG00000022194 1359 0.832 - 0.832 - - - - poly(A) binding protein, nuclear 1 [Source:MGI Symbol;Acc:MGI:1859158]
85. Hipk1 ENSMUSG00000008730 2363 0.831 - 0.831 - - - - homeodomain interacting protein kinase 1 [Source:MGI Symbol;Acc:MGI:1314873]
86. Nif3l1 ENSMUSG00000026036 1546 0.831 - 0.831 - - - - Ngg1 interacting factor 3-like 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1929485]
87. AI987944 ENSMUSG00000056383 1199 0.831 - 0.831 - - - - expressed sequence AI987944 [Source:MGI Symbol;Acc:MGI:2142079]
88. Sirt4 ENSMUSG00000029524 437 0.831 - 0.831 - - - - sirtuin 4 [Source:MGI Symbol;Acc:MGI:1922637]
89. Ccm2 ENSMUSG00000000378 851 0.831 - 0.831 - - - - cerebral cavernous malformation 2 [Source:MGI Symbol;Acc:MGI:2384924]
90. Zfp551 ENSMUSG00000034071 101 0.831 - 0.831 - - - - zinc fingr protein 551 [Source:MGI Symbol;Acc:MGI:3588205]
91. R3hcc1l ENSMUSG00000025184 576 0.829 - 0.829 - - - - R3H domain and coiled-coil containing 1 like [Source:MGI Symbol;Acc:MGI:1196316]
92. Ankrd13c ENSMUSG00000039988 429 0.829 - 0.829 - - - - ankyrin repeat domain 13c [Source:MGI Symbol;Acc:MGI:2139746]
93. Amd2 ENSMUSG00000063953 486 0.828 - 0.828 - - - - S-adenosylmethionine decarboxylase 2 [Source:MGI Symbol;Acc:MGI:1333111]
94. Plekhm3 ENSMUSG00000051344 627 0.828 - 0.828 - - - - pleckstrin homology domain containing, family M, member 3 [Source:MGI Symbol;Acc:MGI:2443627]
95. Tmem127 ENSMUSG00000034850 691 0.828 - 0.828 - - - - transmembrane protein 127 [Source:MGI Symbol;Acc:MGI:1916720]
96. Fxr1 ENSMUSG00000027680 2134 0.828 - 0.828 - - - - fragile X mental retardation gene 1, autosomal homolog [Source:MGI Symbol;Acc:MGI:104860]
97. Senp3 ENSMUSG00000005204 505 0.828 - 0.828 - - - - SUMO/sentrin specific peptidase 3 [Source:MGI Symbol;Acc:MGI:2158736]
98. Ralb ENSMUSG00000004451 1130 0.827 - 0.827 - - - - v-ral simian leukemia viral oncogene B [Source:MGI Symbol;Acc:MGI:1927244]
99. Scfd1 ENSMUSG00000020952 1076 0.827 - 0.827 - - - - Sec1 family domain containing 1 [Source:MGI Symbol;Acc:MGI:1924233]
100. Zfp141 ENSMUSG00000092416 930 0.826 - 0.826 - - - - zinc finger protein 141 [Source:MGI Symbol;Acc:MGI:3584269]

There are 227 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA