Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Trim58

Gene Name Gene ID Reads Annotation
Trim58 ENSMUSG00000037124 3 tripartite motif-containing 58 [Source:MGI Symbol;Acc:MGI:2684862]







Genes with expression patterns similar to Trim58

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Trim58 ENSMUSG00000037124 3 2 - - - 1.000 1.000 - tripartite motif-containing 58 [Source:MGI Symbol;Acc:MGI:2684862]
2. Pcsk1 ENSMUSG00000021587 20 1.904 - - - 0.904 1.000 - proprotein convertase subtilisin/kexin type 1 [Source:MGI Symbol;Acc:MGI:97511]
3. C230038L03Rik ENSMUSG00000085560 2 1 - - - - 1.000 - RIKEN cDNA C230038L03 gene [Source:MGI Symbol;Acc:MGI:3697433]
4. 2210407C18Rik ENSMUSG00000037145 7 1 - - - - 1.000 - RIKEN cDNA 2210407C18 gene [Source:MGI Symbol;Acc:MGI:1925604]
5. Galnt15 ENSMUSG00000021903 3 1 - - - - 1.000 - polypeptide N-acetylgalactosaminyltransferase 15 [Source:MGI Symbol;Acc:MGI:1926004]
6. Gm20407 ENSMUSG00000092182 2 1 - - - - 1.000 - predicted gene 20407 [Source:MGI Symbol;Acc:MGI:5141872]
7. RP23-282G22.2 RP23-282G22.2 1 1 - - - - 1.000 -
8. M6pr-ps ENSMUSG00000080832 3 1 - - - - 1.000 - mannose-6-phosphate receptor, pseudogene [Source:MGI Symbol;Acc:MGI:96905]
9. Gm1110 ENSMUSG00000079644 2 1 - - - 1.000 - - predicted gene 1110 [Source:MGI Symbol;Acc:MGI:2685956]
10. Zfp296 ENSMUSG00000011267 12 1 - - - - 1.000 - zinc finger protein 296 [Source:MGI Symbol;Acc:MGI:1926956]
11. Gm26823 ENSMUSG00000096926 8 1 - - - 1.000 - - predicted gene, 26823 [Source:MGI Symbol;Acc:MGI:5477317]
12. Gm26795 ENSMUSG00000097776 1 1 - - - - 1.000 - predicted gene, 26795 [Source:MGI Symbol;Acc:MGI:5477289]
13. Olfr78 ENSMUSG00000043366 1 1 - - - - 1.000 - olfactory receptor 78 [Source:MGI Symbol;Acc:MGI:2157548]
14. Foxa3 ENSMUSG00000040891 20 1 - - - - 1.000 - forkhead box A3 [Source:MGI Symbol;Acc:MGI:1347477]
15. Tex19.2 ENSMUSG00000039337 2 1 - - - - 1.000 - testis expressed gene 19.2 [Source:MGI Symbol;Acc:MGI:1918206]
16. Krtap17-1 ENSMUSG00000078252 1 1 - - - - 1.000 - keratin associated protein 17-1 [Source:MGI Symbol;Acc:MGI:1925164]
17. Gm5292 ENSMUSG00000059565 22 1 - - - 1.000 - - predicted gene 5292 [Source:MGI Symbol;Acc:MGI:3645663]
18. Tlr11 ENSMUSG00000051969 1 1 - - - - 1.000 - toll-like receptor 11 [Source:MGI Symbol;Acc:MGI:3045226]
19. Gm17081 ENSMUSG00000090338 1 1 - - - - 1.000 - predicted gene 17081 [Source:MGI Symbol;Acc:MGI:4937908]
20. Gm20637 ENSMUSG00000093687 5 1 - - - - 1.000 - predicted gene 20637 [Source:MGI Symbol;Acc:MGI:5313084]
21. Rps15a-ps4 ENSMUSG00000083757 11 1 - - - 1.000 - - ribosomal protein S15A, pseudogene 4 [Source:MGI Symbol;Acc:MGI:3652187]
22. Gm25508 Gm25508 1 1 - - - - 1.000 -
23. Gm15720 ENSMUSG00000082120 3 1 - - - - 1.000 - predicted gene 15720 [Source:MGI Symbol;Acc:MGI:3783164]
24. 1700007G11Rik 1 1 - - - - 1.000 - RIKEN cDNA 1700007G11 gene, transcript variant X2
25. Gm14279 ENSMUSG00000081740 7 1 - - - - 1.000 - predicted gene 14279 [Source:MGI Symbol;Acc:MGI:3650107]
26. Gm15506 ENSMUSG00000086477 7 1 - - - - 1.000 - predicted gene 15506 [Source:MGI Symbol;Acc:MGI:3782954]
27. Sohlh2 ENSMUSG00000027794 2 1 - - - - 1.000 - spermatogenesis and oogenesis specific basic helix-loop-helix 2 [Source:MGI Symbol;Acc:MGI:1921684]
28. Clec4g ENSMUSG00000074491 17 1 - - - 1.000 - - C-type lectin domain family 4, member g [Source:MGI Symbol;Acc:MGI:1923113]
29. Gm15232 ENSMUSG00000084806 13 1 - - - - 1.000 - predicted gene 15232 [Source:MGI Symbol;Acc:MGI:3705117]
30. 4930519G04Rik ENSMUSG00000029564 2 1 - - - 1.000 - - RIKEN cDNA 4930519G04 gene [Source:MGI Symbol;Acc:MGI:1914843]
31. Gm9703 ENSMUSG00000082741 6 1 - - - - 1.000 - predicted gene 9703 [Source:MGI Symbol;Acc:MGI:3780110]
32. Gm16618 ENSMUSG00000086837 1 1 - - - - 1.000 - predicted gene, 16618 [Source:MGI Symbol;Acc:MGI:4439542]
33. Gm15764 ENSMUSG00000087556, ENSMUSG00000103450 4 1 - - - 1.000 - - predicted gene 15764 [Source:MGI Symbol;Acc:MGI:3783206]
34. Gm13637 Gm13637 2 1 - - - 1.000 - -
35. RMST RMST 10 1 - - - 1.000 - -
36. 4930578M01Rik ENSMUSG00000097587 7 1 - - - 1.000 - - RIKEN cDNA 4930578M01 gene [Source:MGI Symbol;Acc:MGI:1923201]
37. Cxcl1 ENSMUSG00000029380 4 1 - - - - 1.000 - chemokine (C-X-C motif) ligand 1 [Source:MGI Symbol;Acc:MGI:108068]
38. 5730412P04Rik ENSMUSG00000087553 2 1 - - - 1.000 - - RIKEN cDNA 5730412P04 gene [Source:MGI Symbol;Acc:MGI:1917741]
39. Obp2a ENSMUSG00000062061 1 1 - - - - 1.000 - odorant binding protein 2A [Source:MGI Symbol;Acc:MGI:2387617]
40. 1110002L01Rik ENSMUSG00000071456 4 1 - - - 1.000 - - RIKEN cDNA 1110002L01 gene [Source:MGI Symbol;Acc:MGI:1915821]
41. Gm11404 ENSMUSG00000082553 1 1 - - - - 1.000 - predicted gene 11404 [Source:MGI Symbol;Acc:MGI:3651011]
42. Gm26533 ENSMUSG00000097748 5 1 - - - - 1.000 - predicted gene, 26533 [Source:MGI Symbol;Acc:MGI:5477027]
43. 9430029A11Rik 9430029A11Rik 2 1 - - - - 1.000 -
44. Gm10293 ENSMUSG00000070490 15 1 - - - 1.000 - - predicted pseudogene 10293 [Source:MGI Symbol;Acc:MGI:3704216]
45. Gjb4 ENSMUSG00000046623 1 1 - - - - 1.000 - gap junction protein, beta 4 [Source:MGI Symbol;Acc:MGI:95722]
46. Ang5 ENSMUSG00000053961 1 1 - - - - 1.000 - angiogenin, ribonuclease A family, member 5 [Source:MGI Symbol;Acc:MGI:3528599]
47. Gm14302 ENSMUSG00000085760 10 1 - - - - 1.000 - predicted gene 14302 [Source:MGI Symbol;Acc:MGI:3701953]
48. Gm12038 ENSMUSG00000082157 6 1 - - - 1.000 - - predicted gene 12038 [Source:MGI Symbol;Acc:MGI:3651601]
49. n-R5s58 ENSMUSG00000070192 1 1 - - - - 1.000 - nuclear encoded rRNA 5S 58 [Source:MGI Symbol;Acc:MGI:4421903]
50. Zfp616 ENSMUSG00000069476 1 1 - - - - 1.000 - zinc finger protein 616 [Source:MGI Symbol;Acc:MGI:3650906]
51. Slc15a1 ENSMUSG00000025557 5 1 - - - 1.000 - - solute carrier family 15 (oligopeptide transporter), member 1 [Source:MGI Symbol;Acc:MGI:1861376]
52. Cyp2b23 ENSMUSG00000040650 2 1 - - - - 1.000 - cytochrome P450, family 2, subfamily b, polypeptide 23 [Source:MGI Symbol;Acc:MGI:3646735]
53. Meig1 ENSMUSG00000026650 7 1 - - - - 1.000 - meiosis expressed gene 1 [Source:MGI Symbol;Acc:MGI:1202878]
54. Gm12445 ENSMUSG00000081483 1 1 - - - - 1.000 - predicted gene 12445 [Source:MGI Symbol;Acc:MGI:3650256]
55. Gm21981 ENSMUSG00000079444 45 1 - - - - 1.000 - predicted gene 21981 [Source:MGI Symbol;Acc:MGI:5439450]
56. Gm6798 ENSMUSG00000082496 2 1 - - - 1.000 - - predicted gene 6798 [Source:MGI Symbol;Acc:MGI:3646258]
57. 0610040B10Rik ENSMUSG00000089889 31 0.979 - - - 0.979 - - RIKEN cDNA 0610040B10 gene [Source:MGI Symbol;Acc:MGI:1914922]
58. Mettl21c ENSMUSG00000047343 13 0.971 - - - 0.971 - - methyltransferase like 21C [Source:MGI Symbol;Acc:MGI:3611450]
59. 1110035M17Rik 1110035M17Rik 27 0.957 - - - 0.957 - -
60. Otx1 ENSMUSG00000005917 7 0.941 - - - 0.941 - - orthodenticle homeobox 1 [Source:MGI Symbol;Acc:MGI:97450]
61. Gm6733 ENSMUSG00000084329 8 0.934 - - - 0.934 - - predicted gene 6733 [Source:MGI Symbol;Acc:MGI:3645402]
62. Gm11647 Gm11647 13 0.934 - - - 0.934 - -
63. Gm26761 ENSMUSG00000097668 3 0.918 - - - 0.918 - - predicted gene, 26761 [Source:MGI Symbol;Acc:MGI:5477255]
64. Barhl1 ENSMUSG00000026805 447 0.913 - - - 0.913 - - BarH like homeobox 1 [Source:MGI Symbol;Acc:MGI:1859288]
65. Gm14046 ENSMUSG00000084328 15 0.913 - - - 0.913 - - predicted gene 14046 [Source:MGI Symbol;Acc:MGI:3650215]
66. Olfr960 ENSMUSG00000059867 3 0.912 - - - - 0.912 - olfactory receptor 960 [Source:MGI Symbol;Acc:MGI:3030794]
67. C030014I23Rik ENSMUSG00000060380 18 0.907 - - - 0.907 - - RIKEN cDNA C030014I23 gene [Source:MGI Symbol;Acc:MGI:1924631]
68. Zscan25 ENSMUSG00000070420 12 0.894 - - - 0.894 - - zinc finger and SCAN domain containing 25 [Source:MGI Symbol;Acc:MGI:3647079]
69. Ccnb1ip1 ENSMUSG00000071470 5 0.891 - - - 0.891 - - cyclin B1 interacting protein 1 [Source:MGI Symbol;Acc:MGI:2685134]
70. Gm11221 ENSMUSG00000082998 16 0.887 - - - 0.887 - - predicted gene 11221 [Source:MGI Symbol;Acc:MGI:3651633]
71. Nynrin ENSMUSG00000075592 34 0.878 - - - 0.878 - - NYN domain and retroviral integrase containing [Source:MGI Symbol;Acc:MGI:2652872]
72. Gm13719 ENSMUSG00000083864 10 0.876 - - - 0.876 - - predicted gene 13719 [Source:MGI Symbol;Acc:MGI:3649492]
73. Wnt3 ENSMUSG00000000125 142 0.875 - - - 0.875 - - wingless-type MMTV integration site family, member 3 [Source:MGI Symbol;Acc:MGI:98955]
74. Gm16796 ENSMUSG00000085495 5 0.867 - - - 0.867 - - predicted gene, 16796 [Source:MGI Symbol;Acc:MGI:4439720]
75. RP23-296I6.5 RP23-296I6.5 46 0.864 - - - 0.864 - -
76. Ddx60 ENSMUSG00000037921 7 0.861 - - - - 0.861 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 [Source:MGI Symbol;Acc:MGI:2384570]
77. Cd63-ps ENSMUSG00000085939 24 0.861 - - - - 0.861 - CD63 antigen, pseudogene [Source:MGI Symbol;Acc:MGI:105972]
78. B130046B21Rik ENSMUSG00000097414 59 0.857 - - - 0.857 - - RIKEN cDNA B130046B21 gene [Source:MGI Symbol;Acc:MGI:3704458]
79. B230217O12Rik ENSMUSG00000097785 47 0.854 - - - 0.854 - - RIKEN cDNA B230217O12 gene [Source:MGI Symbol;Acc:MGI:2444948]
80. Zfp92 ENSMUSG00000031374 10 0.841 - - - - 0.841 - zinc finger protein 92 [Source:MGI Symbol;Acc:MGI:108094]
81. Krt13 ENSMUSG00000044041 8 0.834 - - - - 0.834 - keratin 13 [Source:MGI Symbol;Acc:MGI:101925]
82. Gm10480 Gm10480 7 0.834 - - - - 0.834 -
83. Atoh1 ENSMUSG00000073043 396 0.834 - - - 0.834 - - atonal bHLH transcription factor 1 [Source:MGI Symbol;Acc:MGI:104654]
84. Gm21989 ENSMUSG00000090370 10 0.834 - - - - 0.834 - predicted gene 21989 [Source:MGI Symbol;Acc:MGI:5439458]
85. 6720483E21Rik ENSMUSG00000097934 16 0.828 - - - 0.828 - - RIKEN cDNA 6720483E21 gene [Source:MGI Symbol;Acc:MGI:1924991]
86. Muc1 ENSMUSG00000042784 30 0.822 - - - 0.822 - - mucin 1, transmembrane [Source:MGI Symbol;Acc:MGI:97231]
87. Gm4980 Gm4980 19 0.821 - - - 0.821 - -
88. Gpr84 ENSMUSG00000063234 16 0.819 - - - 0.819 - - G protein-coupled receptor 84 [Source:MGI Symbol;Acc:MGI:1934129]
89. Grin2c ENSMUSG00000020734 238 0.817 - - - 0.817 - - glutamate receptor, ionotropic, NMDA2C (epsilon 3) [Source:MGI Symbol;Acc:MGI:95822]
90. Papln ENSMUSG00000021223 2 0.814 - - - - 0.814 - papilin, proteoglycan-like sulfated glycoprotein [Source:MGI Symbol;Acc:MGI:2386139]
91. Gm11659 ENSMUSG00000085134 73 0.809 - - - 0.809 - - predicted gene 11659 [Source:MGI Symbol;Acc:MGI:3649220]
92. Ins1 ENSMUSG00000035804 36 0.801 - - - - 0.801 - insulin I [Source:MGI Symbol;Acc:MGI:96572]
93. Tnfsf8 ENSMUSG00000028362 4 0.801 - - - - 0.801 - tumor necrosis factor (ligand) superfamily, member 8 [Source:MGI Symbol;Acc:MGI:88328]
94. C1ql3 ENSMUSG00000049630 47 0.8 - - - 0.800 - - C1q-like 3 [Source:MGI Symbol;Acc:MGI:2387350]
95. Prr16 ENSMUSG00000073565 31 0.799 - - - 0.799 - - proline rich 16 [Source:MGI Symbol;Acc:MGI:1918623]
96. Hsp25-ps1 ENSMUSG00000078915 28 0.799 - - - 0.799 - - heat shock protein 25, pseudogene 1 [Source:MGI Symbol;Acc:MGI:96241]
97. Pnma1 ENSMUSG00000054383 15 0.797 - - - 0.797 - - paraneoplastic antigen MA1 [Source:MGI Symbol;Acc:MGI:2180564]
98. Gm15788 ENSMUSG00000087439 17 0.797 - - - 0.797 - - predicted gene 15788 [Source:MGI Symbol;Acc:MGI:3783230]
99. Ube2u ENSMUSG00000069733 28 0.795 - - - 0.795 - - ubiquitin-conjugating enzyme E2U (putative) [Source:MGI Symbol;Acc:MGI:3588216]
100. Stxbp5l ENSMUSG00000022829 17 0.795 - - - 0.795 - - syntaxin binding protein 5-like [Source:MGI Symbol;Acc:MGI:2443815]

There are 38 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA