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Results for Trim39

Gene Name Gene ID Reads Annotation
Trim39 ENSMUSG00000045409 968 tripartite motif-containing 39 [Source:MGI Symbol;Acc:MGI:1890659]







Genes with expression patterns similar to Trim39

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Trim39 ENSMUSG00000045409 968 6 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif-containing 39 [Source:MGI Symbol;Acc:MGI:1890659]
2. Rnpc3 ENSMUSG00000027981 855 1.831 - 0.960 - - - 0.871 RNA-binding region (RNP1, RRM) containing 3 [Source:MGI Symbol;Acc:MGI:1914475]
3. Nudt11 ENSMUSG00000073295 757 1.763 - 0.950 - - - 0.813 nudix (nucleoside diphosphate linked moiety X)-type motif 11 [Source:MGI Symbol;Acc:MGI:1930957]
4. Cndp2 ENSMUSG00000024644 840 1.712 - 0.882 - - - 0.830 CNDP dipeptidase 2 (metallopeptidase M20 family) [Source:MGI Symbol;Acc:MGI:1913304]
5. 2210016F16Rik ENSMUSG00000021550 975 1.679 - 0.895 - - - 0.784 RIKEN cDNA 2210016F16 gene [Source:MGI Symbol;Acc:MGI:1917403]
6. Pank2 ENSMUSG00000037514 1182 1.678 - 0.958 - - - 0.720 pantothenate kinase 2 [Source:MGI Symbol;Acc:MGI:1921700]
7. Mycl ENSMUSG00000028654 904 1.66 - 0.918 - - - 0.742 v-myc avian myelocytomatosis viral oncogene lung carcinoma derived [Source:MGI Symbol;Acc:MGI:96799]
8. Sirpa ENSMUSG00000037902 940 1.658 - 0.894 - - - 0.764 signal-regulatory protein alpha [Source:MGI Symbol;Acc:MGI:108563]
9. Atp9b ENSMUSG00000024566 1263 1.649 - 0.842 - - - 0.807 ATPase, class II, type 9B [Source:MGI Symbol;Acc:MGI:1354757]
10. Gm6368 ENSMUSG00000080775 1795 1.644 - 0.844 - - - 0.800 predicted gene 6368 [Source:MGI Symbol;Acc:MGI:3644537]
11. Acer3 ENSMUSG00000030760 598 1.639 0.704 0.935 - - - - alkaline ceramidase 3 [Source:MGI Symbol;Acc:MGI:1913440]
12. Gtl3 Gtl3 1883 1.617 - 0.878 - - - 0.739
13. Trub1 ENSMUSG00000025086 1396 1.591 - 0.728 - - - 0.863 TruB pseudouridine (psi) synthase family member 1 [Source:MGI Symbol;Acc:MGI:1919383]
14. Fopnl ENSMUSG00000022677 1745 1.575 - 0.829 - - - 0.746 Fgfr1op N-terminal like [Source:MGI Symbol;Acc:MGI:1913336]
15. Ddx41 ENSMUSG00000021494 788 1.573 - 0.775 - - - 0.798 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Source:MGI Symbol;Acc:MGI:1920185]
16. Emc3 ENSMUSG00000030286 997 1.561 - 0.729 - - - 0.832 ER membrane protein complex subunit 3 [Source:MGI Symbol;Acc:MGI:1913337]
17. Srek1ip1 ENSMUSG00000021716 2652 1.554 - 0.830 - - - 0.724 splicing regulatory glutamine/lysine-rich protein 1interacting protein 1 [Source:MGI Symbol;Acc:MGI:1914538]
18. Tusc1 ENSMUSG00000054000 3467 1.537 - 0.756 0.781 - - - tumor suppressor candidate 1 [Source:MGI Symbol;Acc:MGI:2684283]
19. Gm7418 ENSMUSG00000090188 1513 1.524 - 0.815 - - - 0.709 predicted pseudogene 7418 [Source:MGI Symbol;Acc:MGI:3779742]
20. Zbtb5 ENSMUSG00000049657 1113 1.513 - 0.721 - - - 0.792 zinc finger and BTB domain containing 5 [Source:MGI Symbol;Acc:MGI:1924601]
21. Efs ENSMUSG00000022203 645 0.965 - 0.965 - - - - embryonal Fyn-associated substrate [Source:MGI Symbol;Acc:MGI:105311]
22. Xpc ENSMUSG00000030094 530 0.962 - 0.962 - - - - xeroderma pigmentosum, complementation group C [Source:MGI Symbol;Acc:MGI:103557]
23. Anks1 ENSMUSG00000024219 2498 0.962 - 0.962 - - - - ankyrin repeat and SAM domain containing 1 [Source:MGI Symbol;Acc:MGI:2446180]
24. Rhod ENSMUSG00000041845 571 0.961 - 0.961 - - - - ras homolog family member D [Source:MGI Symbol;Acc:MGI:108446]
25. 4933426M11Rik 4933426M11Rik 441 0.961 - 0.961 - - - -
26. Ppm1d ENSMUSG00000020525 1303 0.96 - 0.960 - - - - protein phosphatase 1D magnesium-dependent, delta isoform [Source:MGI Symbol;Acc:MGI:1858214]
27. Gm12840 ENSMUSG00000086320 98 0.959 - 0.959 - - - - predicted gene 12840 [Source:MGI Symbol;Acc:MGI:3650917]
28. Spon2 ENSMUSG00000037379 204 0.958 - 0.958 - - - - spondin 2, extracellular matrix protein [Source:MGI Symbol;Acc:MGI:1923724]
29. Gskip ENSMUSG00000044715 985 0.958 - 0.958 - - - - GSK3B interacting protein [Source:MGI Symbol;Acc:MGI:1914037]
30. Zfp120 ENSMUSG00000068134 814 0.958 - 0.958 - - - - zinc finger protein 120 [Source:MGI Symbol;Acc:MGI:1345179]
31. Lox ENSMUSG00000024529 219 0.957 - 0.957 - - - - lysyl oxidase [Source:MGI Symbol;Acc:MGI:96817]
32. AA465934 ENSMUSG00000093483 144 0.957 - 0.957 - - - - expressed sequence AA465934 [Source:MGI Symbol;Acc:MGI:2671018]
33. Aarsd1 ENSMUSG00000075528 70 0.956 - 0.956 - - - - alanyl-tRNA synthetase domain containing 1 [Source:MGI Symbol;Acc:MGI:1916934]
34. Fam151b ENSMUSG00000034334 2211 0.956 - 0.956 - - - - family with sequence similarity 151, member B [Source:MGI Symbol;Acc:MGI:1921192]
35. Aspa ENSMUSG00000020774 50 0.956 - 0.956 - - - - aspartoacylase [Source:MGI Symbol;Acc:MGI:87914]
36. St3gal4 ENSMUSG00000032038 227 0.956 - 0.956 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:MGI Symbol;Acc:MGI:1316743]
37. 3110099E03Rik ENSMUSG00000085582 57 0.955 - 0.955 - - - - RIKEN cDNA 3110099E03 gene [Source:MGI Symbol;Acc:MGI:1925761]
38. Irs1 ENSMUSG00000055980 207 0.955 - 0.955 - - - - insulin receptor substrate 1 [Source:MGI Symbol;Acc:MGI:99454]
39. Gm3695 ENSMUSG00000067224 120 0.955 - 0.955 - - - - predicted gene 3695 [Source:MGI Symbol;Acc:MGI:3781871]
40. Hpse ENSMUSG00000035273 197 0.955 - 0.955 - - - - heparanase [Source:MGI Symbol;Acc:MGI:1343124]
41. Zbtb41 ENSMUSG00000033964 787 0.955 - 0.955 - - - - zinc finger and BTB domain containing 41 [Source:MGI Symbol;Acc:MGI:2444487]
42. Atp6v0a2 ENSMUSG00000038023 268 0.955 - 0.955 - - - - ATPase, H+ transporting, lysosomal V0 subunit A2 [Source:MGI Symbol;Acc:MGI:104855]
43. 2310014L17Rik 2310014L17Rik 153 0.955 - 0.955 - - - -
44. Zfp36 ENSMUSG00000044786 157 0.955 - 0.955 - - - - zinc finger protein 36 [Source:MGI Symbol;Acc:MGI:99180]
45. Rgl1 ENSMUSG00000026482 938 0.955 - 0.955 - - - - ral guanine nucleotide dissociation stimulator,-like 1 [Source:MGI Symbol;Acc:MGI:107484]
46. Stambpl1 ENSMUSG00000024776 130 0.954 - 0.954 - - - - STAM binding protein like 1 [Source:MGI Symbol;Acc:MGI:1923880]
47. Pomk ENSMUSG00000037251 373 0.954 - 0.954 - - - - protein-O-mannose kinase [Source:MGI Symbol;Acc:MGI:1921903]
48. Mtus1 ENSMUSG00000045636 912 0.954 - 0.954 - - - - mitochondrial tumor suppressor 1 [Source:MGI Symbol;Acc:MGI:2142572]
49. Cmah ENSMUSG00000016756 641 0.954 - 0.954 - - - - cytidine monophospho-N-acetylneuraminic acid hydroxylase [Source:MGI Symbol;Acc:MGI:103227]
50. Slc25a32 ENSMUSG00000022299, ENSMUSG00000107007 146 0.954 - 0.954 - - - - solute carrier family 25, member 32 [Source:MGI Symbol;Acc:MGI:1917156]
51. Timm23 ENSMUSG00000013701 439 0.954 - 0.954 - - - - translocase of inner mitochondrial membrane 23 [Source:MGI Symbol;Acc:MGI:1858317]
52. Zfp819 ENSMUSG00000055102 59 0.952 - 0.952 - - - - zinc finger protein 819 [Source:MGI Symbol;Acc:MGI:1921650]
53. Efemp2 ENSMUSG00000024909 777 0.952 - 0.952 - - - - epidermal growth factor-containing fibulin-like extracellular matrix protein 2 [Source:MGI Symbol;Acc:MGI:1891209]
54. Sh3yl1 ENSMUSG00000020669 209 0.951 - 0.951 - - - - Sh3 domain YSC-like 1 [Source:MGI Symbol;Acc:MGI:1346118]
55. Kcnk1 ENSMUSG00000033998 256 0.951 - 0.951 - - - - potassium channel, subfamily K, member 1 [Source:MGI Symbol;Acc:MGI:109322]
56. Mettl2 ENSMUSG00000020691 572 0.95 - 0.950 - - - - methyltransferase like 2 [Source:MGI Symbol;Acc:MGI:1289171]
57. Gm21596 ENSMUSG00000096006 743 0.949 - 0.949 - - - - predicted gene, 21596 [Source:MGI Symbol;Acc:MGI:5434951]
58. Tmem203 ENSMUSG00000078201 356 0.948 - 0.948 - - - - transmembrane protein 203 [Source:MGI Symbol;Acc:MGI:2443597]
59. Nup37 ENSMUSG00000035351 2174 0.948 - 0.948 - - - - nucleoporin 37 [Source:MGI Symbol;Acc:MGI:1919964]
60. Coq10b ENSMUSG00000025981 471 0.948 - 0.948 - - - - coenzyme Q10B [Source:MGI Symbol;Acc:MGI:1915126]
61. Slc9a8 ENSMUSG00000039463 761 0.947 - 0.947 - - - - solute carrier family 9 (sodium/hydrogen exchanger), member 8 [Source:MGI Symbol;Acc:MGI:1924281]
62. Pax5 ENSMUSG00000014030 74 0.947 - 0.947 - - - - paired box 5 [Source:MGI Symbol;Acc:MGI:97489]
63. Sgsm2 ENSMUSG00000038351 512 0.947 - 0.947 - - - - small G protein signaling modulator 2 [Source:MGI Symbol;Acc:MGI:2144695]
64. Gm4258 ENSMUSG00000098243 99 0.947 - 0.947 - - - - predicted gene 4258 [Source:MGI Symbol;Acc:MGI:3782435]
65. Nid2 ENSMUSG00000021806 452 0.946 - 0.946 - - - - nidogen 2 [Source:MGI Symbol;Acc:MGI:1298229]
66. Nfatc2ip ENSMUSG00000030722 920 0.946 - 0.946 - - - - nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein [Source:MGI Symbol;Acc:MGI:1329015]
67. Bbs2 ENSMUSG00000031755 976 0.946 - 0.946 - - - - Bardet-Biedl syndrome 2 (human) [Source:MGI Symbol;Acc:MGI:2135267]
68. Zkscan5 ENSMUSG00000055991 579 0.945 - 0.945 - - - - zinc finger with KRAB and SCAN domains 5 [Source:MGI Symbol;Acc:MGI:107533]
69. Malt1 ENSMUSG00000032688 329 0.945 - 0.945 - - - - MALT1 paracaspase [Source:MGI Symbol;Acc:MGI:2445027]
70. Zfc3h1 ENSMUSG00000034163 1104 0.943 - 0.943 - - - - zinc finger, C3H1-type containing [Source:MGI Symbol;Acc:MGI:2446143]
71. Cyth3 ENSMUSG00000018001 1113 0.943 - 0.943 - - - - cytohesin 3 [Source:MGI Symbol;Acc:MGI:1335107]
72. 4933404O12Rik ENSMUSG00000097908 302 0.943 - 0.943 - - - - RIKEN cDNA 4933404O12 gene [Source:MGI Symbol;Acc:MGI:1914002]
73. Gm14843 ENSMUSG00000083897 219 0.942 - 0.942 - - - - predicted gene 14843 [Source:MGI Symbol;Acc:MGI:3802062]
74. Ndfip1 ENSMUSG00000024425 231 0.942 - 0.942 - - - - Nedd4 family interacting protein 1 [Source:MGI Symbol;Acc:MGI:1929601]
75. Pdcd2 ENSMUSG00000014771 871 0.942 - 0.942 - - - - programmed cell death 2 [Source:MGI Symbol;Acc:MGI:104643]
76. Tex10 ENSMUSG00000028345 705 0.942 - 0.942 - - - - testis expressed gene 10 [Source:MGI Symbol;Acc:MGI:1344413]
77. Bag2 ENSMUSG00000042215 801 0.941 - 0.941 - - - - BCL2-associated athanogene 2 [Source:MGI Symbol;Acc:MGI:1891254]
78. Mlx ENSMUSG00000017801 376 0.941 - 0.941 - - - - MAX-like protein X [Source:MGI Symbol;Acc:MGI:108398]
79. Tbc1d9 ENSMUSG00000031709 688 0.94 - 0.940 - - - - TBC1 domain family, member 9 [Source:MGI Symbol;Acc:MGI:1918560]
80. Ube3c ENSMUSG00000039000 1417 0.94 - 0.940 - - - - ubiquitin protein ligase E3C [Source:MGI Symbol;Acc:MGI:2140998]
81. Arnt ENSMUSG00000015522 777 0.939 - 0.939 - - - - aryl hydrocarbon receptor nuclear translocator [Source:MGI Symbol;Acc:MGI:88071]
82. Rnf19a ENSMUSG00000022280 802 0.938 - 0.938 - - - - ring finger protein 19A [Source:MGI Symbol;Acc:MGI:1353623]
83. Kif26b ENSMUSG00000026494 872 0.937 - 0.937 - - - - kinesin family member 26B [Source:MGI Symbol;Acc:MGI:2447076]
84. Cacna2d1 ENSMUSG00000040118 2307 0.937 - 0.937 - - - - calcium channel, voltage-dependent, alpha2/delta subunit 1 [Source:MGI Symbol;Acc:MGI:88295]
85. Ankrd29 ENSMUSG00000057766 352 0.937 - 0.937 - - - - ankyrin repeat domain 29 [Source:MGI Symbol;Acc:MGI:2687055]
86. Zfp384 ENSMUSG00000038346 1875 0.936 - 0.936 - - - - zinc finger protein 384 [Source:MGI Symbol;Acc:MGI:2443203]
87. Atrip ENSMUSG00000025646 321 0.936 - 0.936 - - - - ATR interacting protein [Source:MGI Symbol;Acc:MGI:1925349]
88. Zfp428 ENSMUSG00000064264 966 0.935 - 0.935 - - - - zinc finger protein 428 [Source:MGI Symbol;Acc:MGI:1916463]
89. Usb1 ENSMUSG00000031792 470 0.935 - 0.935 - - - - U6 snRNA biogenesis 1 [Source:MGI Symbol;Acc:MGI:2142454]
90. 2310047M10Rik 2310047M10Rik 249 0.935 - 0.935 - - - -
91. 6330416G13Rik 684 0.935 - 0.935 - - - - RIKEN cDNA 6330416G13 gene, transcript variant X5
92. D130007C19Rik ENSMUSG00000054304 661 0.934 - 0.934 - - - - RIKEN cDNA D130007C19 gene [Source:MGI Symbol;Acc:MGI:3045257]
93. Tpmt ENSMUSG00000021376 544 0.933 - 0.933 - - - - thiopurine methyltransferase [Source:MGI Symbol;Acc:MGI:98812]
94. Acy1 ENSMUSG00000023262 490 0.932 - 0.932 - - - - aminoacylase 1 [Source:MGI Symbol;Acc:MGI:87913]
95. Bola3 ENSMUSG00000045160 1800 0.932 - 0.932 - - - - bolA-like 3 (E. coli) [Source:MGI Symbol;Acc:MGI:1925903]
96. Cdc73 ENSMUSG00000026361 2326 0.931 - 0.931 - - - - cell division cycle 73, Paf1/RNA polymerase II complex component [Source:MGI Symbol;Acc:MGI:2384876]
97. Shisa5 ENSMUSG00000025647 1562 0.93 - 0.930 - - - - shisa family member 5 [Source:MGI Symbol;Acc:MGI:1915044]
98. Hps4 ENSMUSG00000042328 481 0.93 - 0.930 - - - - HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 [Source:MGI Symbol;Acc:MGI:2177742]
99. Tsr1 ENSMUSG00000038335 1073 0.93 - 0.930 - - - - TSR1 20S rRNA accumulation [Source:MGI Symbol;Acc:MGI:2144566]
100. Gm22662 ENSMUSG00000093031 187 0.93 - 0.930 - - - - predicted gene, 22662 [Source:MGI Symbol;Acc:MGI:5452439]

There are 598 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA