Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Trim3

Gene Name Gene ID Reads Annotation
Trim3 ENSMUSG00000036989 619 tripartite motif-containing 3 [Source:MGI Symbol;Acc:MGI:1860040]







Genes with expression patterns similar to Trim3

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Trim3 ENSMUSG00000036989 619 6 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif-containing 3 [Source:MGI Symbol;Acc:MGI:1860040]
2. Gm10086 ENSMUSG00000060730 2124 1.515 0.763 - - 0.752 - - predicted pseudogene 10086 [Source:MGI Symbol;Acc:MGI:3642342]
3. Gm14290 Gm14290 85 0.943 0.943 - - - - -
4. Nit1 ENSMUSG00000013997 660 0.938 0.938 - - - - - nitrilase 1 [Source:MGI Symbol;Acc:MGI:1350916]
5. Pnpla2 ENSMUSG00000025509 905 0.937 0.937 - - - - - patatin-like phospholipase domain containing 2 [Source:MGI Symbol;Acc:MGI:1914103]
6. Tnip1 ENSMUSG00000020400 414 0.936 0.936 - - - - - TNFAIP3 interacting protein 1 [Source:MGI Symbol;Acc:MGI:1926194]
7. Vps8 ENSMUSG00000033653 284 0.935 0.935 - - - - - VPS8 CORVET complex subunit [Source:MGI Symbol;Acc:MGI:2146407]
8. Camkv ENSMUSG00000032936 71 0.935 0.935 - - - - - CaM kinase-like vesicle-associated [Source:MGI Symbol;Acc:MGI:2384296]
9. Cradd ENSMUSG00000045867 347 0.934 0.934 - - - - - CASP2 and RIPK1 domain containing adaptor with death domain [Source:MGI Symbol;Acc:MGI:1336168]
10. Kirrel ENSMUSG00000041734 243 0.934 0.934 - - - - - kirre like nephrin family adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1891396]
11. Gm15703 ENSMUSG00000083890 47 0.931 0.931 - - - - - predicted gene 15703 [Source:MGI Symbol;Acc:MGI:3783143]
12. Ccdc146 ENSMUSG00000064280 65 0.931 0.931 - - - - - coiled-coil domain containing 146 [Source:MGI Symbol;Acc:MGI:1922422]
13. Zfp354b ENSMUSG00000020335 56 0.931 0.931 - - - - - zinc finger protein 354B [Source:MGI Symbol;Acc:MGI:1351476]
14. Ptma-ps1 ENSMUSG00000095331 29 0.931 0.931 - - - - - prothymosin alpha, pseudogene 1 [Source:MGI Symbol;Acc:MGI:3644252]
15. Gm12029 ENSMUSG00000081820 26 0.931 0.931 - - - - - predicted gene 12029 [Source:MGI Symbol;Acc:MGI:3651192]
16. Gm15696 ENSMUSG00000083853 35 0.931 0.931 - - - - - predicted gene 15696 [Source:MGI Symbol;Acc:MGI:3783137]
17. Scrg1 ENSMUSG00000031610 40 0.931 0.931 - - - - - scrapie responsive gene 1 [Source:MGI Symbol;Acc:MGI:1328308]
18. 4930432K21Rik ENSMUSG00000008129 59 0.931 0.931 - - - - - RIKEN cDNA 4930432K21 gene [Source:MGI Symbol;Acc:MGI:1921916]
19. Tceal6 ENSMUSG00000031409 119 0.93 0.930 - - - - - transcription elongation factor A (SII)-like 6 [Source:MGI Symbol;Acc:MGI:1923939]
20. Hist1h4k ENSMUSG00000064288 71 0.93 0.930 - - - - - histone cluster 1, H4k [Source:MGI Symbol;Acc:MGI:2448439]
21. Gm11217 ENSMUSG00000085032 29 0.929 0.929 - - - - - predicted gene 11217 [Source:MGI Symbol;Acc:MGI:3651042]
22. Gm14760 ENSMUSG00000081221 37 0.929 0.929 - - - - - predicted gene 14760 [Source:MGI Symbol;Acc:MGI:3709612]
23. BC039771 291 0.927 0.927 - - - - - cDNA sequence BC039771
24. Asap3 ENSMUSG00000036995 98 0.927 0.927 - - - - - ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:MGI Symbol;Acc:MGI:2684986]
25. Slc27a6 ENSMUSG00000024600 60 0.927 0.927 - - - - - solute carrier family 27 (fatty acid transporter), member 6 [Source:MGI Symbol;Acc:MGI:3036230]
26. Lmln ENSMUSG00000022802 160 0.927 0.927 - - - - - leishmanolysin-like (metallopeptidase M8 family) [Source:MGI Symbol;Acc:MGI:2444736]
27. Htra2 ENSMUSG00000068329 44 0.926 0.926 - - - - - HtrA serine peptidase 2 [Source:MGI Symbol;Acc:MGI:1928676]
28. Gm24854 ENSMUSG00000088650 314 0.926 0.926 - - - - - predicted gene, 24854 [Source:MGI Symbol;Acc:MGI:5454631]
29. Ikzf4 ENSMUSG00000002578 522 0.925 0.925 - - - - - IKAROS family zinc finger 4 [Source:MGI Symbol;Acc:MGI:1343139]
30. RP24-289J12.1 RP24-289J12.1 254 0.924 0.924 - - - - -
31. Gm27010 ENSMUSG00000098183 452 0.924 0.924 - - - - - predicted gene, 27010 [Source:MGI Symbol;Acc:MGI:5504125]
32. Slc4a4 ENSMUSG00000060961 235 0.924 0.924 - - - - - solute carrier family 4 (anion exchanger), member 4 [Source:MGI Symbol;Acc:MGI:1927555]
33. Zfp13 ENSMUSG00000062012 261 0.923 0.923 - - - - - zinc finger protein 13 [Source:MGI Symbol;Acc:MGI:99159]
34. Cdk6 ENSMUSG00000040274 355 0.923 0.923 - - - - - cyclin-dependent kinase 6 [Source:MGI Symbol;Acc:MGI:1277162]
35. Nr2c2ap ENSMUSG00000071078 241 0.922 0.922 - - - - - nuclear receptor 2C2-associated protein [Source:MGI Symbol;Acc:MGI:1922942]
36. Lipg ENSMUSG00000053846 221 0.921 0.921 - - - - - lipase, endothelial [Source:MGI Symbol;Acc:MGI:1341803]
37. Usp40 ENSMUSG00000005501 1265 0.921 0.921 - - - - - ubiquitin specific peptidase 40 [Source:MGI Symbol;Acc:MGI:2443184]
38. Pdik1l ENSMUSG00000050890 697 0.921 0.921 - - - - - PDLIM1 interacting kinase 1 like [Source:MGI Symbol;Acc:MGI:2385213]
39. Fgf5 ENSMUSG00000029337 249 0.921 0.921 - - - - - fibroblast growth factor 5 [Source:MGI Symbol;Acc:MGI:95519]
40. Gtpbp10 ENSMUSG00000040464 1042 0.92 0.920 - - - - - GTP-binding protein 10 (putative) [Source:MGI Symbol;Acc:MGI:2385599]
41. Fahd2a ENSMUSG00000027371 222 0.919 0.919 - - - - - fumarylacetoacetate hydrolase domain containing 2A [Source:MGI Symbol;Acc:MGI:1915376]
42. Gm16459 ENSMUSG00000084022 255 0.919 0.919 - - - - - predicted gene 16459 [Source:MGI Symbol;Acc:MGI:3644110]
43. Gm20492 ENSMUSG00000092593 105 0.918 0.918 - - - - - predicted gene 20492 [Source:MGI Symbol;Acc:MGI:5141957]
44. Ogg1 ENSMUSG00000030271 242 0.918 0.918 - - - - - 8-oxoguanine DNA-glycosylase 1 [Source:MGI Symbol;Acc:MGI:1097693]
45. Polh ENSMUSG00000023953 65 0.916 0.916 - - - - - polymerase (DNA directed), eta (RAD 30 related) [Source:MGI Symbol;Acc:MGI:1891457]
46. 2900053O20Rik 2900053O20Rik 125 0.916 0.916 - - - - -
47. Tango2 ENSMUSG00000013539, ENSMUSG00000098377 1209 0.914 0.914 - - - - - transport and golgi organization 2 [Source:MGI Symbol;Acc:MGI:101825]
48. A930033H14Rik ENSMUSG00000090622 197 0.914 0.914 - - - - - RIKEN cDNA A930033H14 gene [Source:MGI Symbol;Acc:MGI:2444562]
49. Gm12088 ENSMUSG00000086707 296 0.913 0.913 - - - - - predicted gene 12088 [Source:MGI Symbol;Acc:MGI:3650337]
50. Mgat4a ENSMUSG00000026110 296 0.913 0.913 - - - - - mannoside acetylglucosaminyltransferase 4, isoenzyme A [Source:MGI Symbol;Acc:MGI:2662992]
51. Mtfp1 ENSMUSG00000004748 496 0.913 0.913 - - - - - mitochondrial fission process 1 [Source:MGI Symbol;Acc:MGI:1916686]
52. Elp6 ENSMUSG00000054836 449 0.912 0.912 - - - - - elongator acetyltransferase complex subunit 6 [Source:MGI Symbol;Acc:MGI:1919349]
53. Tmem26 ENSMUSG00000060044 379 0.911 0.911 - - - - - transmembrane protein 26 [Source:MGI Symbol;Acc:MGI:2143537]
54. Tfb2m ENSMUSG00000026492 253 0.91 0.910 - - - - - transcription factor B2, mitochondrial [Source:MGI Symbol;Acc:MGI:107937]
55. Upf3a ENSMUSG00000038398 402 0.91 0.910 - - - - - UPF3 regulator of nonsense transcripts homolog A (yeast) [Source:MGI Symbol;Acc:MGI:1914281]
56. Tmem161b ENSMUSG00000035762 229 0.908 0.908 - - - - - transmembrane protein 161B [Source:MGI Symbol;Acc:MGI:1919995]
57. Ndfip1 ENSMUSG00000024425 231 0.906 0.906 - - - - - Nedd4 family interacting protein 1 [Source:MGI Symbol;Acc:MGI:1929601]
58. Brox ENSMUSG00000046836 1657 0.905 0.905 - - - - - BRO1 domain and CAAX motif containing [Source:MGI Symbol;Acc:MGI:1918928]
59. Abhd14b ENSMUSG00000042073 300 0.904 0.904 - - - - - abhydrolase domain containing 14b [Source:MGI Symbol;Acc:MGI:1923741]
60. Polg ENSMUSG00000039176 405 0.904 0.904 - - - - - polymerase (DNA directed), gamma [Source:MGI Symbol;Acc:MGI:1196389]
61. Hspbap1 ENSMUSG00000022849 273 0.902 0.902 - - - - - Hspb associated protein 1 [Source:MGI Symbol;Acc:MGI:1913917]
62. Epn2 ENSMUSG00000001036 1070 0.902 0.902 - - - - - epsin 2 [Source:MGI Symbol;Acc:MGI:1333766]
63. Klhl6 ENSMUSG00000043008 952 0.901 0.901 - - - - - kelch-like 6 [Source:MGI Symbol;Acc:MGI:2686922]
64. Polg2 ENSMUSG00000020718 273 0.901 0.901 - - - - - polymerase (DNA directed), gamma 2, accessory subunit [Source:MGI Symbol;Acc:MGI:1354947]
65. Gm15051 Gm15051 144 0.901 0.901 - - - - -
66. She ENSMUSG00000046280 1769 0.9 0.900 - - - - - src homology 2 domain-containing transforming protein E [Source:MGI Symbol;Acc:MGI:1099462]
67. Sfrp5 ENSMUSG00000018822 686 0.899 0.899 - - - - - secreted frizzled-related sequence protein 5 [Source:MGI Symbol;Acc:MGI:1860298]
68. Slc38a9 ENSMUSG00000047789 646 0.899 0.899 - - - - - solute carrier family 38, member 9 [Source:MGI Symbol;Acc:MGI:1918839]
69. Gm2531 ENSMUSG00000058567 236 0.895 0.895 - - - - - predicted gene 2531 [Source:MGI Symbol;Acc:MGI:3780699]
70. Lama4 ENSMUSG00000019846 736 0.894 0.894 - - - - - laminin, alpha 4 [Source:MGI Symbol;Acc:MGI:109321]
71. Gm21917 ENSMUSG00000096111 466 0.894 0.894 - - - - - predicted gene, 21917 [Source:MGI Symbol;Acc:MGI:5434081]
72. Coprs ENSMUSG00000031458 1554 0.893 0.893 - - - - - coordinator of PRMT5, differentiation stimulator [Source:MGI Symbol;Acc:MGI:1913673]
73. Snx21 ENSMUSG00000050373 473 0.892 0.892 - - - - - sorting nexin family member 21 [Source:MGI Symbol;Acc:MGI:1917729]
74. Pdia5 ENSMUSG00000022844 1610 0.892 0.892 - - - - - protein disulfide isomerase associated 5 [Source:MGI Symbol;Acc:MGI:1919849]
75. Mlf1ip Mlf1ip 320 0.891 0.891 - - - - -
76. Gm14017 ENSMUSG00000081967 689 0.89 0.890 - - - - - predicted gene 14017 [Source:MGI Symbol;Acc:MGI:3702155]
77. 2010001M06Rik 2010001M06Rik 233 0.89 0.890 - - - - -
78. Ddx25 ENSMUSG00000032101 555 0.889 0.889 - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 [Source:MGI Symbol;Acc:MGI:1353582]
79. Cebpb ENSMUSG00000056501 245 0.888 0.888 - - - - - CCAAT/enhancer binding protein (C/EBP), beta [Source:MGI Symbol;Acc:MGI:88373]
80. 1700049G17Rik 282 0.887 0.887 - - - - - RIKEN cDNA 1700049G17 gene
81. Gtf3c3 ENSMUSG00000041303 471 0.886 0.886 - - - - - general transcription factor IIIC, polypeptide 3 [Source:MGI Symbol;Acc:MGI:2138383]
82. Slc52a2 ENSMUSG00000022560 369 0.886 0.886 - - - - - solute carrier protein 52, member 2 [Source:MGI Symbol;Acc:MGI:1289288]
83. Vill ENSMUSG00000038775 297 0.885 0.885 - - - - - villin-like [Source:MGI Symbol;Acc:MGI:1201781]
84. Alox8 ENSMUSG00000020891 145 0.885 0.885 - - - - - arachidonate 8-lipoxygenase [Source:MGI Symbol;Acc:MGI:1098228]
85. Zfp219 ENSMUSG00000049295 199 0.883 0.883 - - - - - zinc finger protein 219 [Source:MGI Symbol;Acc:MGI:1917140]
86. Fn3krp ENSMUSG00000039253 676 0.881 0.881 - - - - - fructosamine 3 kinase related protein [Source:MGI Symbol;Acc:MGI:2679256]
87. Bsdc1 ENSMUSG00000040859 234 0.881 0.881 - - - - - BSD domain containing 1 [Source:MGI Symbol;Acc:MGI:1913466]
88. Alkbh8 ENSMUSG00000025899 1212 0.88 0.880 - - - - - alkB homolog 8, tRNA methyltransferase [Source:MGI Symbol;Acc:MGI:1914917]
89. Erlec1 ENSMUSG00000020311 458 0.879 0.879 - - - - - endoplasmic reticulum lectin 1 [Source:MGI Symbol;Acc:MGI:1914003]
90. Cep152 ENSMUSG00000068394 643 0.879 0.879 - - - - - centrosomal protein 152 [Source:MGI Symbol;Acc:MGI:2139083]
91. Gnl1 ENSMUSG00000024429 820 0.879 0.879 - - - - - guanine nucleotide binding protein-like 1 [Source:MGI Symbol;Acc:MGI:95764]
92. Srl ENSMUSG00000022519 577 0.878 0.878 - - - - - sarcalumenin [Source:MGI Symbol;Acc:MGI:2146620]
93. St8sia2 ENSMUSG00000025789 3710 0.877 0.877 - - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:MGI Symbol;Acc:MGI:106020]
94. Trmt2a ENSMUSG00000022721, ENSMUSG00000098930 1641 0.877 0.877 - - - - - TRM2 tRNA methyltransferase 2A [Source:MGI Symbol;Acc:MGI:96270]
95. Spats2l ENSMUSG00000038305 220 0.877 0.877 - - - - - spermatogenesis associated, serine-rich 2-like [Source:MGI Symbol;Acc:MGI:1914448]
96. Polr3a ENSMUSG00000025280 489 0.877 0.877 - - - - - polymerase (RNA) III (DNA directed) polypeptide A [Source:MGI Symbol;Acc:MGI:2681836]
97. Fpgs ENSMUSG00000009566 605 0.876 0.876 - - - - - folylpolyglutamyl synthetase [Source:MGI Symbol;Acc:MGI:95576]
98. Cntrob ENSMUSG00000032782 747 0.876 0.876 - - - - - centrobin, centrosomal BRCA2 interacting protein [Source:MGI Symbol;Acc:MGI:2443290]
99. Gm10240 ENSMUSG00000068397 824 0.875 0.875 - - - - - predicted gene 10240 [Source:MGI Symbol;Acc:MGI:3704454]
100. Slc25a22 ENSMUSG00000019082 749 0.875 0.875 - - - - - solute carrier family 25 (mitochondrial carrier, glutamate), member 22 [Source:MGI Symbol;Acc:MGI:1915517]

There are 213 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA