Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Trim21

Gene Name Gene ID Reads Annotation
Trim21 ENSMUSG00000030966 294 tripartite motif-containing 21 [Source:MGI Symbol;Acc:MGI:106657]







Genes with expression patterns similar to Trim21

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Trim21 ENSMUSG00000030966 294 6 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif-containing 21 [Source:MGI Symbol;Acc:MGI:106657]
2. n-R5s31 ENSMUSG00000077350 17 0.867 - 0.867 - - - - nuclear encoded rRNA 5S 31 [Source:MGI Symbol;Acc:MGI:4421876]
3. Micall2 ENSMUSG00000036718 130 0.846 - 0.846 - - - - MICAL-like 2 [Source:MGI Symbol;Acc:MGI:2444818]
4. Rbl2 ENSMUSG00000031666 25 0.837 - 0.837 - - - - RB transcriptional corepressor like 2 [Source:MGI Symbol;Acc:MGI:105085]
5. Gm19357 Gm19357 51 0.835 - 0.835 - - - -
6. Dnase1l3 ENSMUSG00000025279 16 0.828 - 0.828 - - - - deoxyribonuclease 1-like 3 [Source:MGI Symbol;Acc:MGI:1314633]
7. Gm14261 ENSMUSG00000085322 26 0.828 - 0.828 - - - - predicted gene 14261 [Source:MGI Symbol;Acc:MGI:3649583]
8. Gm16365 ENSMUSG00000086915 59 0.828 - 0.828 - - - - predicted gene 16365 [Source:MGI Symbol;Acc:MGI:3840143]
9. Adamtsl5 ENSMUSG00000043822 31 0.828 - 0.828 - - - - ADAMTS-like 5 [Source:MGI Symbol;Acc:MGI:1913798]
10. Gm13151 Gm13151 9 0.828 - 0.828 - - - -
11. Gm10557 ENSMUSG00000073647 15 0.828 - 0.828 - - - - predicted gene 10557 [Source:MGI Symbol;Acc:MGI:3708638]
12. 1600029O15Rik ENSMUSG00000057818 30 0.825 - 0.825 - - - - RIKEN cDNA 1600029O15 gene [Source:MGI Symbol;Acc:MGI:3045362]
13. Pkn1 ENSMUSG00000057672 59 0.825 - 0.825 - - - - protein kinase N1 [Source:MGI Symbol;Acc:MGI:108022]
14. Myh14 ENSMUSG00000030739 30 0.821 - 0.821 - - - - myosin, heavy polypeptide 14 [Source:MGI Symbol;Acc:MGI:1919210]
15. M5C1000I18Rik ENSMUSG00000055125 33 0.821 - 0.821 - - - - RIKEN cDNA M5C1000I18 gene [Source:MGI Symbol;Acc:MGI:3642038]
16. Lnpep ENSMUSG00000023845 48 0.82 - 0.820 - - - - leucyl/cystinyl aminopeptidase [Source:MGI Symbol;Acc:MGI:2387123]
17. Gm2a ENSMUSG00000000594 385 0.819 - 0.819 - - - - GM2 ganglioside activator protein [Source:MGI Symbol;Acc:MGI:95762]
18. Gm26826 ENSMUSG00000097635 33 0.818 - 0.818 - - - - predicted gene, 26826 [Source:MGI Symbol;Acc:MGI:5477320]
19. Gm22613 ENSMUSG00000084628 31 0.815 - 0.815 - - - - predicted gene, 22613 [Source:MGI Symbol;Acc:MGI:5452390]
20. 6330408A02Rik 210 0.814 - 0.814 - - - - RIKEN cDNA 6330408A02 gene
21. Steap3 ENSMUSG00000026389 20 0.813 - 0.813 - - - - STEAP family member 3 [Source:MGI Symbol;Acc:MGI:1915678]
22. Tulp1 ENSMUSG00000037446 33 0.809 - 0.809 - - - - tubby like protein 1 [Source:MGI Symbol;Acc:MGI:109571]
23. Pyroxd2 ENSMUSG00000060224 46 0.809 - 0.809 - - - - pyridine nucleotide-disulphide oxidoreductase domain 2 [Source:MGI Symbol;Acc:MGI:1921830]
24. Alpk3 ENSMUSG00000038763 71 0.807 - 0.807 - - - - alpha-kinase 3 [Source:MGI Symbol;Acc:MGI:2151224]
25. Dcp1b ENSMUSG00000041477 377 0.803 - - 0.803 - - - decapping mRNA 1B [Source:MGI Symbol;Acc:MGI:2442404]
26. Prdm4 ENSMUSG00000035529 1371 0.801 - - 0.801 - - - PR domain containing 4 [Source:MGI Symbol;Acc:MGI:1920093]
27. Mettl25 ENSMUSG00000036009 217 0.8 - 0.800 - - - - methyltransferase like 25 [Source:MGI Symbol;Acc:MGI:3041259]
28. Abcg1 ENSMUSG00000024030 101 0.799 - 0.799 - - - - ATP binding cassette subfamily G member 1 [Source:MGI Symbol;Acc:MGI:107704]
29. Kif13b ENSMUSG00000060012 56 0.798 - 0.798 - - - - kinesin family member 13B [Source:MGI Symbol;Acc:MGI:1098265]
30. Vps13c ENSMUSG00000035284 230 0.797 - 0.797 - - - - vacuolar protein sorting 13C [Source:MGI Symbol;Acc:MGI:2444207]
31. Gm6055 ENSMUSG00000062081 62 0.794 - 0.794 - - - - predicted gene 6055 [Source:MGI Symbol;Acc:MGI:3648620]
32. Bspry ENSMUSG00000028392 37 0.793 - 0.793 - - - - B-box and SPRY domain containing [Source:MGI Symbol;Acc:MGI:2177191]
33. B3gnt3 ENSMUSG00000031803 47 0.79 - 0.790 - - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 [Source:MGI Symbol;Acc:MGI:2152535]
34. Ankrd55 ENSMUSG00000049985 18 0.79 - 0.790 - - - - ankyrin repeat domain 55 [Source:MGI Symbol;Acc:MGI:1924568]
35. Nubp2 ENSMUSG00000039183 1097 0.787 - 0.787 - - - - nucleotide binding protein 2 [Source:MGI Symbol;Acc:MGI:1347072]
36. Fam129a ENSMUSG00000026483 115 0.787 - 0.787 - - - - family with sequence similarity 129, member A [Source:MGI Symbol;Acc:MGI:2137237]
37. Cd44 ENSMUSG00000005087 531 0.787 - 0.787 - - - - CD44 antigen [Source:MGI Symbol;Acc:MGI:88338]
38. Zfp84 ENSMUSG00000046185 136 0.786 - 0.786 - - - - zinc finger protein 84 [Source:MGI Symbol;Acc:MGI:107780]
39. 4930563E22Rik ENSMUSG00000053574 111 0.785 - 0.785 - - - - RIKEN cDNA 4930563E22 gene [Source:MGI Symbol;Acc:MGI:1922554]
40. Ppl ENSMUSG00000039457 107 0.783 - 0.783 - - - - periplakin [Source:MGI Symbol;Acc:MGI:1194898]
41. Fam221a ENSMUSG00000047115 190 0.783 - 0.783 - - - - family with sequence similarity 221, member A [Source:MGI Symbol;Acc:MGI:2442161]
42. Phlda3 ENSMUSG00000041801 173 0.782 - 0.782 - - - - pleckstrin homology like domain, family A, member 3 [Source:MGI Symbol;Acc:MGI:1351485]
43. Grm4 ENSMUSG00000063239 430 0.781 - 0.781 - - - - glutamate receptor, metabotropic 4 [Source:MGI Symbol;Acc:MGI:1351341]
44. Gm13429 ENSMUSG00000085141 36 0.778 - 0.778 - - - - predicted gene 13429 [Source:MGI Symbol;Acc:MGI:3651652]
45. Fmod ENSMUSG00000041559 161 0.777 - 0.777 - - - - fibromodulin [Source:MGI Symbol;Acc:MGI:1328364]
46. Rora ENSMUSG00000032238 241 0.774 - 0.774 - - - - RAR-related orphan receptor alpha [Source:MGI Symbol;Acc:MGI:104661]
47. Trdn ENSMUSG00000019787 30 0.774 - 0.774 - - - - triadin [Source:MGI Symbol;Acc:MGI:1924007]
48. Syt9 ENSMUSG00000062542 127 0.773 - 0.773 - - - - synaptotagmin IX [Source:MGI Symbol;Acc:MGI:1926373]
49. Irf1 ENSMUSG00000018899 239 0.772 - 0.772 - - - - interferon regulatory factor 1 [Source:MGI Symbol;Acc:MGI:96590]
50. Ankrd13d ENSMUSG00000005986 96 0.77 - 0.770 - - - - ankyrin repeat domain 13 family, member D [Source:MGI Symbol;Acc:MGI:1915673]
51. Csf3r ENSMUSG00000028859 278 0.77 - 0.770 - - - - colony stimulating factor 3 receptor (granulocyte) [Source:MGI Symbol;Acc:MGI:1339755]
52. Gpr156 ENSMUSG00000046961 57 0.769 - 0.769 - - - - G protein-coupled receptor 156 [Source:MGI Symbol;Acc:MGI:2653880]
53. Gm9776 ENSMUSG00000042857 174 0.769 - 0.769 - - - - predicted gene 9776 [Source:MGI Symbol;Acc:MGI:3641792]
54. Tbx4 ENSMUSG00000000094 350 0.766 - 0.766 - - - - T-box 4 [Source:MGI Symbol;Acc:MGI:102556]
55. Egr1 ENSMUSG00000038418 99 0.766 - - 0.766 - - - early growth response 1 [Source:MGI Symbol;Acc:MGI:95295]
56. RP24-390G17.1 RP24-390G17.1 125 0.766 - - - - - 0.766
57. Ppm1h ENSMUSG00000034613 200 0.762 - 0.762 - - - - protein phosphatase 1H (PP2C domain containing) [Source:MGI Symbol;Acc:MGI:2442087]
58. Cyb5d2 ENSMUSG00000057778 119 0.761 - 0.761 - - - - cytochrome b5 domain containing 2 [Source:MGI Symbol;Acc:MGI:2684848]
59. Rassf10 ENSMUSG00000098132 107 0.761 - 0.761 - - - - Ras association (RalGDS/AF-6) domain family (N-terminal) member 10 [Source:MGI Symbol;Acc:MGI:1925998]
60. mt-Nd6 ENSMUSG00000064368 301 0.76 - - - - - 0.760 mitochondrially encoded NADH dehydrogenase 6 [Source:MGI Symbol;Acc:MGI:102495]
61. Gm4425 ENSMUSG00000093846 106 0.76 - 0.760 - - - - predicted gene 4425 [Source:MGI Symbol;Acc:MGI:3809660]
62. AI504432 ENSMUSG00000056145 365 0.758 - - 0.758 - - - expressed sequence AI504432 [Source:MGI Symbol;Acc:MGI:2139742]
63. Gm10040 ENSMUSG00000058360 476 0.756 - 0.756 - - - - predicted gene 10040 [Source:MGI Symbol;Acc:MGI:3708676]
64. Snord92 ENSMUSG00000093289 108 0.755 - 0.755 - - - - small nucleolar RNA, C/D box 92 [Source:MGI Symbol;Acc:MGI:3819565]
65. Cntln ENSMUSG00000038070 976 0.755 - 0.755 - - - - centlein, centrosomal protein [Source:MGI Symbol;Acc:MGI:2443104]
66. Rfwd2 1870 0.754 - - 0.754 - - - ring finger and WD repeat domain 2, transcript variant X3
67. Pdcd7 ENSMUSG00000041837 1019 0.752 - - 0.752 - - - programmed cell death 7 [Source:MGI Symbol;Acc:MGI:1859170]
68. Slc35e1 ENSMUSG00000019731 1126 0.752 - 0.752 - - - - solute carrier family 35, member E1 [Source:MGI Symbol;Acc:MGI:2142403]
69. Fam19a1 ENSMUSG00000059187 41 0.752 - 0.752 - - - - family with sequence similarity 19, member A1 [Source:MGI Symbol;Acc:MGI:2443695]
70. Cpne7 ENSMUSG00000034796 49 0.75 - 0.750 - - - - copine VII [Source:MGI Symbol;Acc:MGI:2142747]
71. Gm13077 ENSMUSG00000081544 45 0.75 - 0.750 - - - - predicted gene 13077 [Source:MGI Symbol;Acc:MGI:3649703]
72. Txlnb ENSMUSG00000039891 77 0.748 - 0.748 - - - - taxilin beta [Source:MGI Symbol;Acc:MGI:2671945]
73. Qser1 ENSMUSG00000074994 3293 0.748 - - 0.748 - - - glutamine and serine rich 1 [Source:MGI Symbol;Acc:MGI:2138986]
74. Asph ENSMUSG00000028207 2096 0.748 - 0.748 - - - - aspartate-beta-hydroxylase [Source:MGI Symbol;Acc:MGI:1914186]
75. Zfp667 ENSMUSG00000054893 214 0.744 - 0.744 - - - - zinc finger protein 667 [Source:MGI Symbol;Acc:MGI:2442757]
76. Neat1 ENSMUSG00000092274 205 0.743 - 0.743 - - - - nuclear paraspeckle assembly transcript 1 (non-protein coding) [Source:MGI Symbol;Acc:MGI:1914211]
77. 6430573F11Rik 276 0.742 - - 0.742 - - - RIKEN cDNA 6430573F11 gene, transcript variant X5
78. Trmt44 ENSMUSG00000029097 166 0.739 - - 0.739 - - - tRNA methyltransferase 44 [Source:MGI Symbol;Acc:MGI:1926140]
79. Rps6 ENSMUSG00000028495 132 0.738 - 0.738 - - - - ribosomal protein S6 [Source:MGI Symbol;Acc:MGI:98159]
80. Rapgef4 ENSMUSG00000049044 206 0.736 - 0.736 - - - - Rap guanine nucleotide exchange factor (GEF) 4 [Source:MGI Symbol;Acc:MGI:1917723]
81. Myo1c ENSMUSG00000017774 979 0.735 - 0.735 - - - - myosin IC [Source:MGI Symbol;Acc:MGI:106612]
82. Caps2 ENSMUSG00000035694 1063 0.734 - 0.734 - - - - calcyphosphine 2 [Source:MGI Symbol;Acc:MGI:2441980]
83. Gm25822 Gm25822 46 0.732 - - 0.732 - - -
84. Pth1r ENSMUSG00000032492 1129 0.73 - 0.730 - - - - parathyroid hormone 1 receptor [Source:MGI Symbol;Acc:MGI:97801]
85. Xlr4c ENSMUSG00000031362 30 0.729 - 0.729 - - - - X-linked lymphocyte-regulated 4C [Source:MGI Symbol;Acc:MGI:3574099]
86. Dhdds ENSMUSG00000012117 1081 0.729 - 0.729 - - - - dehydrodolichyl diphosphate synthase [Source:MGI Symbol;Acc:MGI:1914672]
87. Ppp1r12c ENSMUSG00000019254 701 0.728 - 0.728 - - - - protein phosphatase 1, regulatory subunit 12C [Source:MGI Symbol;Acc:MGI:1924258]
88. Tmc6 ENSMUSG00000025572 215 0.727 - 0.727 - - - - transmembrane channel-like gene family 6 [Source:MGI Symbol;Acc:MGI:1098686]
89. Arhgap6 ENSMUSG00000031355 260 0.726 - 0.726 - - - - Rho GTPase activating protein 6 [Source:MGI Symbol;Acc:MGI:1196332]
90. 4932438A13Rik ENSMUSG00000037270 1496 0.725 - - 0.725 - - - RIKEN cDNA 4932438A13 gene [Source:MGI Symbol;Acc:MGI:2444631]
91. Efemp1 ENSMUSG00000020467 735 0.724 - 0.724 - - - - epidermal growth factor-containing fibulin-like extracellular matrix protein 1 [Source:MGI Symbol;Acc:MGI:1339998]
92. Tmem104 ENSMUSG00000045980 190 0.719 - 0.719 - - - - transmembrane protein 104 [Source:MGI Symbol;Acc:MGI:2444222]
93. Rps4y2 Rps4y2 1989 0.719 - 0.719 - - - -
94. Gm27012 Gm27012 164 0.718 - 0.718 - - - -
95. Elovl4 ENSMUSG00000032262 290 0.717 - 0.717 - - - - elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 4 [Source:MGI Symbol;Acc:MGI:1933331]
96. Nrxn3 ENSMUSG00000066392 225 0.716 - 0.716 - - - - neurexin III [Source:MGI Symbol;Acc:MGI:1096389]
97. Riok1 ENSMUSG00000021428 1563 0.716 - - 0.716 - - - RIO kinase 1 [Source:MGI Symbol;Acc:MGI:1918590]
98. Ppp1r16b ENSMUSG00000037754 221 0.715 - 0.715 - - - - protein phosphatase 1, regulatory subunit 16B [Source:MGI Symbol;Acc:MGI:2151841]
99. Fam35a 250 0.714 - 0.714 - - - - family with sequence similarity 35, member A, transcript variant X8
100. Narfl ENSMUSG00000002280 236 0.711 - - 0.711 - - - nuclear prelamin A recognition factor-like [Source:MGI Symbol;Acc:MGI:1914813]

There are 15 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA