Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Trim2

Gene Name Gene ID Reads Annotation
Trim2 ENSMUSG00000027993 3587 tripartite motif-containing 2 [Source:MGI Symbol;Acc:MGI:1933163]







Genes with expression patterns similar to Trim2

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Trim2 ENSMUSG00000027993 3587 6 1.000 1.000 1.000 1.000 1.000 1.000 tripartite motif-containing 2 [Source:MGI Symbol;Acc:MGI:1933163]
2. Pou3f2 ENSMUSG00000095139 2416 4.995 0.823 0.812 0.873 0.821 0.820 0.846 POU domain, class 3, transcription factor 2 [Source:MGI Symbol;Acc:MGI:101895]
3. Sox2 ENSMUSG00000074637 8409 4.714 0.769 0.824 0.843 0.829 0.749 0.700 SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]
4. C130071C03Rik ENSMUSG00000050334 1582 4.643 0.713 0.777 0.815 0.792 0.797 0.749 RIKEN cDNA C130071C03 gene [Source:MGI Symbol;Acc:MGI:2443574]
5. Hes5 ENSMUSG00000048001 1640 4.053 0.799 0.732 0.852 0.823 - 0.847 hes family bHLH transcription factor 5 [Source:MGI Symbol;Acc:MGI:104876]
6. Pgpep1 ENSMUSG00000056204 2455 4.024 - 0.718 0.783 0.887 0.826 0.810 pyroglutamyl-peptidase I [Source:MGI Symbol;Acc:MGI:1913772]
7. 2610017I09Rik 2610017I09Rik 1595 4.008 0.820 - 0.733 0.864 0.771 0.820
8. Nrarp ENSMUSG00000078202 1708 3.992 0.796 0.734 0.830 0.882 0.750 - Notch-regulated ankyrin repeat protein [Source:MGI Symbol;Acc:MGI:1914372]
9. Ckb ENSMUSG00000001270 8443 3.827 0.775 0.744 0.769 0.827 0.712 - creatine kinase, brain [Source:MGI Symbol;Acc:MGI:88407]
10. Tubb2b ENSMUSG00000045136 41060 3.286 - - 0.780 0.894 0.783 0.829 tubulin, beta 2B class IIB [Source:MGI Symbol;Acc:MGI:1920960]
11. AI854517 AI854517 539 3.157 - - 0.781 0.771 0.768 0.837
12. Tagln3 ENSMUSG00000022658 6054 3.156 - - 0.718 0.848 0.770 0.820 transgelin 3 [Source:MGI Symbol;Acc:MGI:1926784]
13. Miat ENSMUSG00000097767 4258 3.149 0.789 - 0.810 0.834 - 0.716 myocardial infarction associated transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444886]
14. Rhbdl3 ENSMUSG00000017692 783 3.11 - 0.754 - 0.825 0.725 0.806 rhomboid like 3 [Source:MGI Symbol;Acc:MGI:2179276]
15. Elavl2 ENSMUSG00000008489 2109 3.083 0.712 - - 0.780 0.792 0.799 ELAV like RNA binding protein 1 [Source:MGI Symbol;Acc:MGI:1100887]
16. Gpr98 Gpr98 1797 3.06 0.764 0.748 - 0.817 - 0.731
17. Apba2 ENSMUSG00000030519 840 3.051 - - 0.731 0.843 0.740 0.737 amyloid beta (A4) precursor protein-binding, family A, member 2 [Source:MGI Symbol;Acc:MGI:1261791]
18. Phf21b ENSMUSG00000016624 849 2.995 0.710 0.764 0.711 0.810 - - PHD finger protein 21B [Source:MGI Symbol;Acc:MGI:2443812]
19. Dll3 ENSMUSG00000003436 1086 2.995 0.739 - 0.719 0.714 - 0.823 delta like canonical Notch ligand 3 [Source:MGI Symbol;Acc:MGI:1096877]
20. Fez1 ENSMUSG00000032118 2537 2.97 - 0.701 - 0.811 0.714 0.744 fasciculation and elongation protein zeta 1 (zygin I) [Source:MGI Symbol;Acc:MGI:2670976]
21. Nhlh2 ENSMUSG00000048540 1310 2.44 - - - 0.851 0.773 0.816 nescient helix loop helix 2 [Source:MGI Symbol;Acc:MGI:97324]
22. Tubb3 ENSMUSG00000062380 9211 2.417 - - - 0.896 0.768 0.753 tubulin, beta 3 class III [Source:MGI Symbol;Acc:MGI:107813]
23. Pou3f3 ENSMUSG00000045515 5137 2.354 - 0.812 0.793 0.749 - - POU domain, class 3, transcription factor 3 [Source:MGI Symbol;Acc:MGI:102564]
24. Hoxc9 ENSMUSG00000036139 4145 2.329 0.705 - 0.815 0.809 - - homeobox C9 [Source:MGI Symbol;Acc:MGI:96199]
25. Dtx4 ENSMUSG00000039982 2901 2.315 - 0.752 0.758 0.805 - - deltex 4, E3 ubiquitin ligase [Source:MGI Symbol;Acc:MGI:2672905]
26. Brsk2 ENSMUSG00000053046 398 2.31 - - 0.815 0.701 - 0.794 BR serine/threonine kinase 2 [Source:MGI Symbol;Acc:MGI:1923020]
27. Hoxb9 ENSMUSG00000020875 2764 2.302 0.769 - 0.741 0.792 - - homeobox B9 [Source:MGI Symbol;Acc:MGI:96190]
28. Myt1 ENSMUSG00000010505 661 2.3 - - - 0.785 0.742 0.773 myelin transcription factor 1 [Source:MGI Symbol;Acc:MGI:1100535]
29. Pax6 ENSMUSG00000027168 2751 2.291 0.751 - - 0.788 0.752 - paired box 6 [Source:MGI Symbol;Acc:MGI:97490]
30. Ago1 ENSMUSG00000041530 7703 2.282 - - - 0.760 0.709 0.813 argonaute RISC catalytic subunit 1 [Source:MGI Symbol;Acc:MGI:2446630]
31. Rfx4 ENSMUSG00000020037 455 2.263 0.747 - 0.746 - - 0.770 regulatory factor X, 4 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1918387]
32. Ildr2 ENSMUSG00000040612 1142 2.238 0.761 0.772 0.705 - - - immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
33. Btg2 ENSMUSG00000020423 1222 2.216 - - 0.729 0.771 - 0.716 B cell translocation gene 2, anti-proliferative [Source:MGI Symbol;Acc:MGI:108384]
34. Sox3 ENSMUSG00000045179 1137 2.168 0.714 0.721 0.733 - - - SRY (sex determining region Y)-box 3 [Source:MGI Symbol;Acc:MGI:98365]
35. Slc1a2 ENSMUSG00000005089 830 2.166 0.716 - - 0.742 0.708 - solute carrier family 1 (glial high affinity glutamate transporter), member 2 [Source:MGI Symbol;Acc:MGI:101931]
36. Igfbpl1 ENSMUSG00000035551 856 2.141 0.702 - 0.725 0.714 - - insulin-like growth factor binding protein-like 1 [Source:MGI Symbol;Acc:MGI:1933198]
37. Ebf1 ENSMUSG00000057098 3112 1.739 - - - 0.900 0.839 - early B cell factor 1 [Source:MGI Symbol;Acc:MGI:95275]
38. Tuba1a ENSMUSG00000072235 51129 1.696 - - - 0.883 0.813 - tubulin, alpha 1A [Source:MGI Symbol;Acc:MGI:98869]
39. Srgap3 ENSMUSG00000030257 2941 1.693 - - - 0.819 - 0.874 SLIT-ROBO Rho GTPase activating protein 3 [Source:MGI Symbol;Acc:MGI:2152938]
40. Cntn2 ENSMUSG00000053024 1798 1.67 - - - 0.894 0.776 - contactin 2 [Source:MGI Symbol;Acc:MGI:104518]
41. Tmsb4x ENSMUSG00000049775 61014 1.657 - - - 0.886 - 0.771 thymosin, beta 4, X chromosome [Source:MGI Symbol;Acc:MGI:99510]
42. Elavl3 ENSMUSG00000003410 2830 1.654 - - - 0.866 0.788 - ELAV like RNA binding protein 3 [Source:MGI Symbol;Acc:MGI:109157]
43. Elavl4 ENSMUSG00000028546 6084 1.634 - - - 0.881 - 0.753 ELAV like RNA binding protein 4 [Source:MGI Symbol;Acc:MGI:107427]
44. Map1b ENSMUSG00000052727 28977 1.608 - - - 0.844 0.764 - microtubule-associated protein 1B [Source:MGI Symbol;Acc:MGI:1306778]
45. Soga3 ENSMUSG00000038916 3972 1.608 - - - 0.859 0.749 - SOGA family member 3 [Source:MGI Symbol;Acc:MGI:1914662]
46. Sall3 ENSMUSG00000024565 449 1.605 - - 0.829 0.776 - - spalt like transcription factor 3 [Source:MGI Symbol;Acc:MGI:109295]
47. Neurod4 ENSMUSG00000048015 764 1.593 - - - 0.868 - 0.725 neurogenic differentiation 4 [Source:MGI Symbol;Acc:MGI:108055]
48. Nhlh1 ENSMUSG00000051251 2017 1.57 - - - 0.844 - 0.726 nescient helix loop helix 1 [Source:MGI Symbol;Acc:MGI:98481]
49. Ncan ENSMUSG00000002341 521 1.566 - - - 0.826 - 0.740 neurocan [Source:MGI Symbol;Acc:MGI:104694]
50. Gm3764 ENSMUSG00000097156 474 1.565 - - - 0.806 0.759 - predicted gene 3764 [Source:MGI Symbol;Acc:MGI:3781938]
51. Msi1 ENSMUSG00000054256 13785 1.562 - - - 0.796 - 0.766 musashi RNA-binding protein 1 [Source:MGI Symbol;Acc:MGI:107376]
52. Celsr3 ENSMUSG00000023473, ENSMUSG00000107269 648 1.56 - - - 0.826 - 0.734 cadherin, EGF LAG seven-pass G-type receptor 3 [Source:MGI Symbol;Acc:MGI:1858236]
53. Frmd5 ENSMUSG00000027238 224 1.558 - - 0.762 - - 0.796 FERM domain containing 5 [Source:MGI Symbol;Acc:MGI:2442557]
54. Chrna4 ENSMUSG00000027577 941 1.554 - - - 0.760 - 0.794 cholinergic receptor, nicotinic, alpha polypeptide 4 [Source:MGI Symbol;Acc:MGI:87888]
55. Slain1 ENSMUSG00000055717 237 1.548 0.726 - - - - 0.822 SLAIN motif family, member 1 [Source:MGI Symbol;Acc:MGI:2145578]
56. Trp53i11 ENSMUSG00000068735 15944 1.541 - 0.700 - 0.841 - - transformation related protein 53 inducible protein 11 [Source:MGI Symbol;Acc:MGI:2670995]
57. Mapk8ip2 ENSMUSG00000022619 910 1.538 - - - 0.823 - 0.715 mitogen-activated protein kinase 8 interacting protein 2 [Source:MGI Symbol;Acc:MGI:1926555]
58. St18 ENSMUSG00000033740 408 1.532 - - - 0.762 0.770 - suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
59. Jakmip2 ENSMUSG00000024502 742 1.531 - - - 0.747 - 0.784 janus kinase and microtubule interacting protein 2 [Source:MGI Symbol;Acc:MGI:1923467]
60. Jam2 ENSMUSG00000053062 1020 1.53 - 0.719 - 0.811 - - junction adhesion molecule 2 [Source:MGI Symbol;Acc:MGI:1933820]
61. Zfp536 ENSMUSG00000043456 869 1.529 - - 0.724 0.805 - - zinc finger protein 536 [Source:MGI Symbol;Acc:MGI:1926102]
62. Cdk5r1 ENSMUSG00000048895 2376 1.527 - - - 0.799 - 0.728 cyclin-dependent kinase 5, regulatory subunit 1 (p35) [Source:MGI Symbol;Acc:MGI:101764]
63. Lhfpl4 ENSMUSG00000042873 331 1.515 - - - 0.754 - 0.761 lipoma HMGIC fusion partner-like protein 4 [Source:MGI Symbol;Acc:MGI:3057108]
64. Pou2f2 ENSMUSG00000008496 362 1.513 - - 0.733 - - 0.780 POU domain, class 2, transcription factor 2 [Source:MGI Symbol;Acc:MGI:101897]
65. Dpysl5 ENSMUSG00000029168 2096 1.505 0.715 - - 0.790 - - dihydropyrimidinase-like 5 [Source:MGI Symbol;Acc:MGI:1929772]
66. Igsf8 ENSMUSG00000038034 9546 1.503 - - - 0.749 0.754 - immunoglobulin superfamily, member 8 [Source:MGI Symbol;Acc:MGI:2154090]
67. Gng3 ENSMUSG00000071658 2104 1.502 - - - 0.768 - 0.734 guanine nucleotide binding protein (G protein), gamma 3 [Source:MGI Symbol;Acc:MGI:102704]
68. Cspg5 ENSMUSG00000032482 105 1.485 - - 0.754 - - 0.731 chondroitin sulfate proteoglycan 5 [Source:MGI Symbol;Acc:MGI:1352747]
69. Hes6 ENSMUSG00000067071 1692 1.473 0.720 - - 0.753 - - hairy and enhancer of split 6 [Source:MGI Symbol;Acc:MGI:1859852]
70. Rtn1 ENSMUSG00000021087 2547 1.471 - - - 0.729 - 0.742 reticulon 1 [Source:MGI Symbol;Acc:MGI:1933947]
71. Gpm6b ENSMUSG00000031342 715 1.466 - - - 0.725 - 0.741 glycoprotein m6b [Source:MGI Symbol;Acc:MGI:107672]
72. Hap1 ENSMUSG00000006930 613 1.464 0.704 0.760 - - - - huntingtin-associated protein 1 [Source:MGI Symbol;Acc:MGI:1261831]
73. Kif21a ENSMUSG00000022629 1223 1.46 - - 0.724 - 0.736 - kinesin family member 21A [Source:MGI Symbol;Acc:MGI:109188]
74. Nsg2 ENSMUSG00000020297 1718 1.458 0.727 - - 0.731 - - neuron specific gene family member 2 [Source:MGI Symbol;Acc:MGI:1202070]
75. Ppp1r17 ENSMUSG00000002930 374 1.454 - - 0.743 0.711 - - protein phosphatase 1, regulatory subunit 17 [Source:MGI Symbol;Acc:MGI:1333876]
76. Dpysl2 ENSMUSG00000022048 17864 1.452 - - - 0.718 0.734 - dihydropyrimidinase-like 2 [Source:MGI Symbol;Acc:MGI:1349763]
77. Dll1 ENSMUSG00000014773 633 1.445 - - 0.709 0.736 - - delta like canonical Notch ligand 1 [Source:MGI Symbol;Acc:MGI:104659]
78. Pcdh8 ENSMUSG00000036422 452 1.445 0.701 - 0.744 - - - protocadherin 8 [Source:MGI Symbol;Acc:MGI:1306800]
79. Fam181b ENSMUSG00000051515 734 1.442 0.727 - 0.715 - - - family with sequence similarity 181, member B [Source:MGI Symbol;Acc:MGI:1930951]
80. Nuak2 ENSMUSG00000009772 426 1.441 0.716 - 0.725 - - - NUAK family, SNF1-like kinase, 2 [Source:MGI Symbol;Acc:MGI:1921387]
81. Celsr2 ENSMUSG00000068740 2010 1.423 - - 0.702 0.721 - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:MGI Symbol;Acc:MGI:1858235]
82. Ednrb ENSMUSG00000022122 1909 1.42 - 0.719 - 0.701 - - endothelin receptor type B [Source:MGI Symbol;Acc:MGI:102720]
83. Stmn2 ENSMUSG00000027500 6200 1.417 - - - 0.714 0.703 - stathmin-like 2 [Source:MGI Symbol;Acc:MGI:98241]
84. Sox2ot ENSMUSG00000105265 475 1.408 - - 0.708 0.700 - - SOX2 overlapping transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444112]
85. Hoxc6 ENSMUSG00000001661 9818 0.845 - - - 0.845 - - homeobox C6 [Source:MGI Symbol;Acc:MGI:96197]
86. Rnf165 ENSMUSG00000025427 2394 0.837 - - - - - 0.837 ring finger protein 165 [Source:MGI Symbol;Acc:MGI:2444521]
87. Pea15a ENSMUSG00000013698 6011 0.835 - - 0.835 - - - phosphoprotein enriched in astrocytes 15A [Source:MGI Symbol;Acc:MGI:104799]
88. Insm1 ENSMUSG00000068154 480 0.831 - - - 0.831 - - insulinoma-associated 1 [Source:MGI Symbol;Acc:MGI:1859980]
89. Cadm1 ENSMUSG00000032076 15203 0.823 - - - 0.823 - - cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1889272]
90. Zic4 ENSMUSG00000036972 1968 0.818 - - - 0.818 - - zinc finger protein of the cerebellum 4 [Source:MGI Symbol;Acc:MGI:107201]
91. Mycl ENSMUSG00000028654 904 0.815 - - 0.815 - - - v-myc avian myelocytomatosis viral oncogene lung carcinoma derived [Source:MGI Symbol;Acc:MGI:96799]
92. Prmt8 ENSMUSG00000030350 342 0.811 - - - 0.811 - - protein arginine N-methyltransferase 8 [Source:MGI Symbol;Acc:MGI:3043083]
93. Enc1 ENSMUSG00000041773 2185 0.808 - - - 0.808 - - ectodermal-neural cortex 1 [Source:MGI Symbol;Acc:MGI:109610]
94. 9330159F19Rik ENSMUSG00000004360 464 0.807 - - - - - 0.807 RIKEN cDNA 9330159F19 gene [Source:MGI Symbol;Acc:MGI:3036239]
95. Wnt7a ENSMUSG00000030093 126 0.805 - - 0.805 - - - wingless-type MMTV integration site family, member 7A [Source:MGI Symbol;Acc:MGI:98961]
96. Ap3b2 ENSMUSG00000062444 565 0.801 - - - 0.801 - - adaptor-related protein complex 3, beta 2 subunit [Source:MGI Symbol;Acc:MGI:1100869]
97. Neurog1 ENSMUSG00000048904 327 0.797 - - - 0.797 - - neurogenin 1 [Source:MGI Symbol;Acc:MGI:107754]
98. Zic1 ENSMUSG00000032368 7734 0.796 - - - 0.796 - - zinc finger protein of the cerebellum 1 [Source:MGI Symbol;Acc:MGI:106683]
99. Syt13 ENSMUSG00000027220 679 0.795 - - - 0.795 - - synaptotagmin XIII [Source:MGI Symbol;Acc:MGI:1933945]
100. Rundc3a ENSMUSG00000006575 421 0.788 - - - 0.788 - - RUN domain containing 3A [Source:MGI Symbol;Acc:MGI:1858752]

There are 85 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA