Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Top3a

Gene Name Gene ID Reads Annotation
Top3a ENSMUSG00000002814 372 topoisomerase (DNA) III alpha [Source:MGI Symbol;Acc:MGI:1197527]







Genes with expression patterns similar to Top3a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Top3a ENSMUSG00000002814 372 6 1.000 1.000 1.000 1.000 1.000 1.000 topoisomerase (DNA) III alpha [Source:MGI Symbol;Acc:MGI:1197527]
2. Ptprj ENSMUSG00000025314 214 0.827 - - - - 0.827 - protein tyrosine phosphatase, receptor type, J [Source:MGI Symbol;Acc:MGI:104574]
3. Gm1141 ENSMUSG00000073130 43 0.811 - - - 0.811 - - predicted gene 1141 [Source:MGI Symbol;Acc:MGI:2685987]
4. C8b ENSMUSG00000029656 12 0.81 - - - 0.810 - - complement component 8, beta polypeptide [Source:MGI Symbol;Acc:MGI:88236]
5. Gm826 ENSMUSG00000074623 27 0.81 - - - 0.810 - - predicted gene 826 [Source:MGI Symbol;Acc:MGI:2685672]
6. Gdf15 ENSMUSG00000038508 10 0.805 - - - 0.805 - - growth differentiation factor 15 [Source:MGI Symbol;Acc:MGI:1346047]
7. Otoa ENSMUSG00000034990 11 0.805 - - - 0.805 - - otoancorin [Source:MGI Symbol;Acc:MGI:2149209]
8. A130051J06Rik ENSMUSG00000097643 24 0.805 - - - 0.805 - - RIKEN cDNA A130051J0 gene [Source:MGI Symbol;Acc:MGI:3642574]
9. Glipr1 ENSMUSG00000056888 12 0.805 - - - 0.805 - - GLI pathogenesis-related 1 (glioma) [Source:MGI Symbol;Acc:MGI:1920940]
10. Vmn1r-ps68 ENSMUSG00000092359 27 0.805 - - - 0.805 - - vomeronasal 1 receptor, pseudogene 68 [Source:MGI Symbol;Acc:MGI:3852413]
11. Sh2d4a ENSMUSG00000053886 52 0.8 - - - 0.800 - - SH2 domain containing 4A [Source:MGI Symbol;Acc:MGI:1919531]
12. Gm6153 ENSMUSG00000090994 31 0.798 - - - 0.798 - - predicted gene 6153 [Source:MGI Symbol;Acc:MGI:3645798]
13. Clcn2 ENSMUSG00000022843 219 0.798 - - - 0.798 - - chloride channel, voltage-sensitive 2 [Source:MGI Symbol;Acc:MGI:105061]
14. Il1r2 ENSMUSG00000026073 26 0.797 - - - 0.797 - - interleukin 1 receptor, type II [Source:MGI Symbol;Acc:MGI:96546]
15. Hc ENSMUSG00000026874 12 0.797 - - - 0.797 - - hemolytic complement [Source:MGI Symbol;Acc:MGI:96031]
16. Sepsecs ENSMUSG00000029173 384 0.796 - - - 0.796 - - Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase [Source:MGI Symbol;Acc:MGI:1098791]
17. Sla2 ENSMUSG00000027636 24 0.795 - - - 0.795 - - Src-like-adaptor 2 [Source:MGI Symbol;Acc:MGI:1925049]
18. Angptl3 ENSMUSG00000028553 11 0.795 - - - 0.795 - - angiopoietin-like 3 [Source:MGI Symbol;Acc:MGI:1353627]
19. Abcb4 ENSMUSG00000042476 26 0.795 - - - 0.795 - - ATP-binding cassette, sub-family B (MDR/TAP), member 4 [Source:MGI Symbol;Acc:MGI:97569]
20. Gm5422 ENSMUSG00000039684 184 0.792 - - - 0.792 - - predicted pseudogene 5422 [Source:MGI Symbol;Acc:MGI:3643411]
21. Ptx4 ENSMUSG00000044172 13 0.792 - - - 0.792 - - pentraxin 4 [Source:MGI Symbol;Acc:MGI:1915759]
22. Cd36 ENSMUSG00000002944 142 0.791 - - - 0.791 - - CD36 molecule [Source:MGI Symbol;Acc:MGI:107899]
23. Ccrl2 ENSMUSG00000043953 22 0.79 - - - 0.790 - - chemokine (C-C motif) receptor-like 2 [Source:MGI Symbol;Acc:MGI:1920904]
24. Siglec5 Siglec5 18 0.786 - - - 0.786 - -
25. Gm4879 ENSMUSG00000048261 46 0.785 - - - 0.785 - - predicted pseudogene 4879 [Source:MGI Symbol;Acc:MGI:3648111]
26. Selplg ENSMUSG00000048163 40 0.784 - - - 0.784 - - selectin, platelet (p-selectin) ligand [Source:MGI Symbol;Acc:MGI:106689]
27. Bphl ENSMUSG00000038286 501 0.783 - - - 0.783 - - biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen) [Source:MGI Symbol;Acc:MGI:1915271]
28. Gm11868 ENSMUSG00000050550 36 0.783 - - - 0.783 - - predicted gene 11868 [Source:MGI Symbol;Acc:MGI:3650507]
29. Gm10010 ENSMUSG00000056771 37 0.782 - - - 0.782 - - predicted gene 10010 [Source:MGI Symbol;Acc:MGI:3641978]
30. Ptprc ENSMUSG00000026395 57 0.782 - - - 0.782 - - protein tyrosine phosphatase, receptor type, C [Source:MGI Symbol;Acc:MGI:97810]
31. Arhgdig ENSMUSG00000073433 60 0.781 - - - 0.781 - - Rho GDP dissociation inhibitor (GDI) gamma [Source:MGI Symbol;Acc:MGI:108430]
32. Mar-01 Mar-01 28 0.779 - - - 0.779 - -
33. Prg2 ENSMUSG00000027073 50 0.779 - - - 0.779 - - proteoglycan 2, bone marrow [Source:MGI Symbol;Acc:MGI:103294]
34. Lefty1 ENSMUSG00000038793 35 0.779 - - - 0.779 - - left right determination factor 1 [Source:MGI Symbol;Acc:MGI:107405]
35. Rbm41 ENSMUSG00000031433 71 0.773 - - - 0.773 - - RNA binding motif protein 41 [Source:MGI Symbol;Acc:MGI:2444923]
36. Neat1 ENSMUSG00000092274 205 0.771 - - - 0.771 - - nuclear paraspeckle assembly transcript 1 (non-protein coding) [Source:MGI Symbol;Acc:MGI:1914211]
37. Mpeg1 ENSMUSG00000046805 63 0.77 - - - 0.770 - - macrophage expressed gene 1 [Source:MGI Symbol;Acc:MGI:1333743]
38. Kirrel3 ENSMUSG00000032036 42 0.769 - - - 0.769 - - kirre like nephrin family adhesion molecule 3 [Source:MGI Symbol;Acc:MGI:1914953]
39. Dram1 ENSMUSG00000020057 43 0.768 - - - 0.768 - - DNA-damage regulated autophagy modulator 1 [Source:MGI Symbol;Acc:MGI:1918962]
40. Cfi ENSMUSG00000058952 17 0.768 - - - 0.768 - - complement component factor i [Source:MGI Symbol;Acc:MGI:105937]
41. Abca8b ENSMUSG00000020620 54 0.768 - - - 0.768 - - ATP-binding cassette, sub-family A (ABC1), member 8b [Source:MGI Symbol;Acc:MGI:1351668]
42. Gm11033 ENSMUSG00000079011 144 0.766 - - 0.766 - - - predicted gene 11033 [Source:MGI Symbol;Acc:MGI:3779256]
43. Creb3l3 ENSMUSG00000035041 46 0.765 - - - 0.765 - - cAMP responsive element binding protein 3-like 3 [Source:MGI Symbol;Acc:MGI:2384786]
44. Cbln3 ENSMUSG00000040380 51 0.764 - - - 0.764 - - cerebellin 3 precursor protein [Source:MGI Symbol;Acc:MGI:1889286]
45. Gm25835 ENSMUSG00000089542 30 0.763 - - - 0.763 - - predicted gene, 25835 [Source:MGI Symbol;Acc:MGI:5455612]
46. Gm8756 ENSMUSG00000098238 52 0.761 - - - 0.761 - - predicted gene 8756 [Source:MGI Symbol;Acc:MGI:3644333]
47. Rpl10a ENSMUSG00000037805 95 0.76 - - 0.760 - - - ribosomal protein L10A [Source:MGI Symbol;Acc:MGI:1343877]
48. Exoc3l4 ENSMUSG00000021280 100 0.759 - - - - 0.759 - exocyst complex component 3-like 4 [Source:MGI Symbol;Acc:MGI:1921363]
49. Parvg ENSMUSG00000022439 145 0.759 - - - 0.759 - - parvin, gamma [Source:MGI Symbol;Acc:MGI:2158329]
50. Mapkapk3 ENSMUSG00000032577 124 0.757 - - - 0.757 - - mitogen-activated protein kinase-activated protein kinase 3 [Source:MGI Symbol;Acc:MGI:2143163]
51. Top1mt ENSMUSG00000000934 72 0.754 - - - 0.754 - - DNA topoisomerase 1, mitochondrial [Source:MGI Symbol;Acc:MGI:1920210]
52. Gna15 ENSMUSG00000034792 26 0.752 - - - 0.752 - - guanine nucleotide binding protein, alpha 15 [Source:MGI Symbol;Acc:MGI:95770]
53. Clasrp ENSMUSG00000061028 843 0.75 - - 0.750 - - - CLK4-associating serine/arginine rich protein [Source:MGI Symbol;Acc:MGI:1855695]
54. Rfxap ENSMUSG00000036615 576 0.75 0.750 - - - - - regulatory factor X-associated protein [Source:MGI Symbol;Acc:MGI:2180854]
55. Psmb11 ENSMUSG00000072423 182 0.75 - - 0.750 - - - proteasome (prosome, macropain) subunit, beta type, 11 [Source:MGI Symbol;Acc:MGI:1921152]
56. Igsf11 ENSMUSG00000022790 190 0.75 - - - - 0.750 - immunoglobulin superfamily, member 11 [Source:MGI Symbol;Acc:MGI:2388477]
57. Hist1h1e ENSMUSG00000051627 604 0.749 - - - - 0.749 - histone cluster 1, H1e [Source:MGI Symbol;Acc:MGI:1931527]
58. Sgsh ENSMUSG00000005043 196 0.749 - - - 0.749 - - N-sulfoglucosamine sulfohydrolase (sulfamidase) [Source:MGI Symbol;Acc:MGI:1350341]
59. AA465934 ENSMUSG00000093483 144 0.747 - - 0.747 - - - expressed sequence AA465934 [Source:MGI Symbol;Acc:MGI:2671018]
60. C1ra ENSMUSG00000055172 76 0.747 - - - 0.747 - - complement component 1, r subcomponent A [Source:MGI Symbol;Acc:MGI:1355313]
61. Gm16416 ENSMUSG00000095940 68 0.747 - - - 0.747 - - predicted gene 16416 [Source:MGI Symbol;Acc:MGI:3646635]
62. Gm10036 ENSMUSG00000058064 122 0.746 - - - 0.746 - - predicted gene 10036 [Source:MGI Symbol;Acc:MGI:3642334]
63. Dock8 ENSMUSG00000052085 64 0.745 - - - 0.745 - - dedicator of cytokinesis 8 [Source:MGI Symbol;Acc:MGI:1921396]
64. Shank3 ENSMUSG00000022623 139 0.745 - - - 0.745 - - SH3 and multiple ankyrin repeat domains 3 [Source:MGI Symbol;Acc:MGI:1930016]
65. Cxcl16 ENSMUSG00000018920 38 0.745 - - - 0.745 - - chemokine (C-X-C motif) ligand 16 [Source:MGI Symbol;Acc:MGI:1932682]
66. Tfr2 ENSMUSG00000029716 51 0.743 - - - 0.743 - - transferrin receptor 2 [Source:MGI Symbol;Acc:MGI:1354956]
67. Slpi ENSMUSG00000017002 14 0.741 - - - 0.741 - - secretory leukocyte peptidase inhibitor [Source:MGI Symbol;Acc:MGI:109297]
68. Leprotl1 ENSMUSG00000031513 1832 0.741 - - - 0.741 - - leptin receptor overlapping transcript-like 1 [Source:MGI Symbol;Acc:MGI:1915442]
69. Rnmtl1 333 0.741 - - - 0.741 - - RNA methyltransferase like 1, transcript variant X1
70. Lyz2 ENSMUSG00000069516 230 0.737 - - - 0.737 - - lysozyme 2 [Source:MGI Symbol;Acc:MGI:96897]
71. Gstm3 ENSMUSG00000004038 25 0.732 - - - 0.732 - - glutathione S-transferase, mu 3 [Source:MGI Symbol;Acc:MGI:106026]
72. Gtf2h3 ENSMUSG00000029387 661 0.731 - - - 0.731 - - general transcription factor IIH, polypeptide 3 [Source:MGI Symbol;Acc:MGI:1277143]
73. Fgl2 ENSMUSG00000039899 55 0.731 - - - 0.731 - - fibrinogen-like protein 2 [Source:MGI Symbol;Acc:MGI:103266]
74. Hps6 ENSMUSG00000074811 74 0.73 - - - 0.730 - - HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 [Source:MGI Symbol;Acc:MGI:2181763]
75. Islr ENSMUSG00000037206 338 0.729 - - 0.729 - - - immunoglobulin superfamily containing leucine-rich repeat [Source:MGI Symbol;Acc:MGI:1349645]
76. Apobec3 ENSMUSG00000009585 138 0.729 - - - 0.729 - - apolipoprotein B mRNA editing enzyme, catalytic polypeptide 3 [Source:MGI Symbol;Acc:MGI:1933111]
77. Bfar ENSMUSG00000022684 1500 0.729 - - - 0.729 - - bifunctional apoptosis regulator [Source:MGI Symbol;Acc:MGI:1914368]
78. Hist1h1d ENSMUSG00000052565 183 0.727 - - - 0.727 - - histone cluster 1, H1d [Source:MGI Symbol;Acc:MGI:107502]
79. Mapk8ip3 ENSMUSG00000024163 733 0.726 - - - 0.726 - - mitogen-activated protein kinase 8 interacting protein 3 [Source:MGI Symbol;Acc:MGI:1353598]
80. Slc2a10 ENSMUSG00000027661 105 0.724 - - - 0.724 - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:MGI Symbol;Acc:MGI:2156687]
81. Tnfaip2 ENSMUSG00000021281 214 0.724 - - - 0.724 - - tumor necrosis factor, alpha-induced protein 2 [Source:MGI Symbol;Acc:MGI:104960]
82. Snhg9 ENSMUSG00000090101 136 0.722 - - - 0.722 - - small nucleolar RNA host gene 9 [Source:MGI Symbol;Acc:MGI:1920724]
83. Clec4a1 ENSMUSG00000049037 53 0.721 - - - 0.721 - - C-type lectin domain family 4, member a1 [Source:MGI Symbol;Acc:MGI:3036291]
84. Rhox5 ENSMUSG00000095180, ENSMUSG00000097306 136 0.72 - - - 0.720 - - reproductive homeobox 5 [Source:MGI Symbol;Acc:MGI:97538]
85. Slc22a3 ENSMUSG00000023828 78 0.72 - - - 0.720 - - solute carrier family 22 (organic cation transporter), member 3 [Source:MGI Symbol;Acc:MGI:1333817]
86. Cnksr1 ENSMUSG00000028841 45 0.72 - - 0.720 - - - connector enhancer of kinase suppressor of Ras 1 [Source:MGI Symbol;Acc:MGI:2670958]
87. Itga4 ENSMUSG00000027009 912 0.718 - - - 0.718 - - integrin alpha 4 [Source:MGI Symbol;Acc:MGI:96603]
88. Slc15a2 ENSMUSG00000022899 126 0.717 - - 0.717 - - - solute carrier family 15 (H+/peptide transporter), member 2 [Source:MGI Symbol;Acc:MGI:1890457]
89. Gm13166 ENSMUSG00000085525, ENSMUSG00000116487 110 0.714 - - - 0.714 - - predicted gene 13166 [Source:MGI Symbol;Acc:MGI:3705130]
90. Milr1 ENSMUSG00000040528 46 0.714 - - - 0.714 - - mast cell immunoglobulin like receptor 1 [Source:MGI Symbol;Acc:MGI:2685731]
91. Slc39a8 ENSMUSG00000053897 431 0.713 - - - 0.713 - - solute carrier family 39 (metal ion transporter), member 8 [Source:MGI Symbol;Acc:MGI:1914797]
92. Nmnat3 ENSMUSG00000032456 69 0.712 - - - 0.712 - - nicotinamide nucleotide adenylyltransferase 3 [Source:MGI Symbol;Acc:MGI:1921330]
93. Rgn ENSMUSG00000023070 86 0.711 - - - 0.711 - - regucalcin [Source:MGI Symbol;Acc:MGI:108024]
94. Gnaz ENSMUSG00000040009 721 0.71 - - - 0.710 - - guanine nucleotide binding protein, alpha z subunit [Source:MGI Symbol;Acc:MGI:95780]
95. Galm ENSMUSG00000035473 269 0.71 - - - 0.710 - - galactose mutarotase [Source:MGI Symbol;Acc:MGI:2442420]
96. Tapbp ENSMUSG00000024308 349 0.708 - - - 0.708 - - TAP binding protein [Source:MGI Symbol;Acc:MGI:1201689]
97. Prkcd ENSMUSG00000021948 898 0.707 - - - 0.707 - - protein kinase C, delta [Source:MGI Symbol;Acc:MGI:97598]
98. Gm9840 154 0.707 - - - 0.707 - - predicted gene 9840, transcript variant X1
99. Sec16b ENSMUSG00000026589 80 0.706 - - - 0.706 - - SEC16 homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2148802]
100. Fam43a ENSMUSG00000046546 767 0.705 - - - 0.705 - - family with sequence similarity 43, member A [Source:MGI Symbol;Acc:MGI:2676309]

There are 2 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA