Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Top1

Gene Name Gene ID Reads Annotation
Top1 ENSMUSG00000070544 27667 topoisomerase (DNA) I [Source:MGI Symbol;Acc:MGI:98788]







Genes with expression patterns similar to Top1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Top1 ENSMUSG00000070544 27667 6 1.000 1.000 1.000 1.000 1.000 1.000 topoisomerase (DNA) I [Source:MGI Symbol;Acc:MGI:98788]
2. Csde1 ENSMUSG00000068823 18265 1.702 - 0.845 0.857 - - - cold shock domain containing E1, RNA binding [Source:MGI Symbol;Acc:MGI:92356]
3. Ube2b ENSMUSG00000020390 14063 0.868 - 0.868 - - - - ubiquitin-conjugating enzyme E2B [Source:MGI Symbol;Acc:MGI:102944]
4. Nr2f1 ENSMUSG00000069171 10292 0.833 - 0.833 - - - - nuclear receptor subfamily 2, group F, member 1 [Source:MGI Symbol;Acc:MGI:1352451]
5. Ptp4a1 ENSMUSG00000026064, ENSMUSG00000117310 16237 0.821 - - 0.821 - - - protein tyrosine phosphatase 4a1 [Source:NCBI gene;Acc:19243]
6. Snx9 ENSMUSG00000002365 1744 0.818 - 0.818 - - - - sorting nexin 9 [Source:MGI Symbol;Acc:MGI:1913866]
7. Smc6 ENSMUSG00000020608 5466 0.817 - - 0.817 - - - structural maintenance of chromosomes 6 [Source:MGI Symbol;Acc:MGI:1914491]
8. Pebp1 ENSMUSG00000032959 17476 0.814 - 0.814 - - - - phosphatidylethanolamine binding protein 1 [Source:MGI Symbol;Acc:MGI:1344408]
9. Neto2 ENSMUSG00000036902 2382 0.809 - 0.809 - - - - neuropilin (NRP) and tolloid (TLL)-like 2 [Source:MGI Symbol;Acc:MGI:1921763]
10. Tspan3 ENSMUSG00000032324 17579 0.808 - 0.808 - - - - tetraspanin 3 [Source:MGI Symbol;Acc:MGI:1928098]
11. Pabpc1 ENSMUSG00000022283 50385 0.807 - - 0.807 - - - poly(A) binding protein, cytoplasmic 1 [Source:MGI Symbol;Acc:MGI:1349722]
12. Mkln1 ENSMUSG00000025609 5308 0.807 - 0.807 - - - - muskelin 1, intracellular mediator containing kelch motifs [Source:MGI Symbol;Acc:MGI:1351638]
13. Eif4g2 ENSMUSG00000005610 83479 0.807 - - 0.807 - - - eukaryotic translation initiation factor 4, gamma 2 [Source:MGI Symbol;Acc:MGI:109207]
14. Ddx3x ENSMUSG00000000787 27968 0.803 - - 0.803 - - - DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked [Source:MGI Symbol;Acc:MGI:103064]
15. Foxp2 ENSMUSG00000029563 3505 0.795 - - 0.795 - - - forkhead box P2 [Source:MGI Symbol;Acc:MGI:2148705]
16. Tnrc6c ENSMUSG00000025571 3072 0.794 - 0.794 - - - - trinucleotide repeat containing 6C [Source:MGI Symbol;Acc:MGI:2443265]
17. Zfp143 ENSMUSG00000061079 2082 0.794 - 0.794 - - - - zinc finger protein 143 [Source:MGI Symbol;Acc:MGI:1277969]
18. Dnal4 ENSMUSG00000022420 1780 0.793 - 0.793 - - - - dynein, axonemal, light chain 4 [Source:MGI Symbol;Acc:MGI:1859217]
19. Nolc1 ENSMUSG00000015176 5067 0.792 - 0.792 - - - - nucleolar and coiled-body phosphoprotein 1 [Source:MGI Symbol;Acc:MGI:1918019]
20. Scaf11 ENSMUSG00000033228 6156 0.786 - 0.786 - - - - SR-related CTD-associated factor 11 [Source:MGI Symbol;Acc:MGI:1919443]
21. Ube2g1 ENSMUSG00000020794 8681 0.783 - 0.783 - - - - ubiquitin-conjugating enzyme E2G 1 [Source:MGI Symbol;Acc:MGI:1914378]
22. Rbp1 ENSMUSG00000046402 6962 0.782 - 0.782 - - - - retinol binding protein 1, cellular [Source:MGI Symbol;Acc:MGI:97876]
23. Eif3e ENSMUSG00000022336 6890 0.781 - 0.781 - - - - eukaryotic translation initiation factor 3, subunit E [Source:MGI Symbol;Acc:MGI:99257]
24. Nrd1 ENSMUSG00000053510 6146 0.773 - 0.773 - - - - nardilysin, N-arginine dibasic convertase, NRD convertase 1 [Source:MGI Symbol;Acc:MGI:1201386]
25. Asna1 ENSMUSG00000052456 3621 0.77 - 0.770 - - - - arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:MGI Symbol;Acc:MGI:1928379]
26. Arl2bp ENSMUSG00000031776 7801 0.77 - 0.770 - - - - ADP-ribosylation factor-like 2 binding protein [Source:MGI Symbol;Acc:MGI:1349429]
27. Tcf4 ENSMUSG00000053477 16999 0.769 - - 0.769 - - - transcription factor 4 [Source:MGI Symbol;Acc:MGI:98506]
28. Zfp260 ENSMUSG00000049421 5404 0.768 - 0.768 - - - - zinc finger protein 260 [Source:MGI Symbol;Acc:MGI:1347071]
29. Svep1 ENSMUSG00000028369 921 0.768 - 0.768 - - - - sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 [Source:MGI Symbol;Acc:MGI:1928849]
30. Rsbn1l ENSMUSG00000039968 1779 0.766 - 0.766 - - - - round spermatid basic protein 1-like [Source:MGI Symbol;Acc:MGI:3036237]
31. Eif2ak1 ENSMUSG00000029613 4174 0.766 - 0.766 - - - - eukaryotic translation initiation factor 2 alpha kinase 1 [Source:MGI Symbol;Acc:MGI:1353448]
32. Hsd17b10 ENSMUSG00000025260 4099 0.765 - 0.765 - - - - hydroxysteroid (17-beta) dehydrogenase 10 [Source:MGI Symbol;Acc:MGI:1333871]
33. Ap2m1 ENSMUSG00000022841 7395 0.765 - 0.765 - - - - adaptor-related protein complex 2, mu 1 subunit [Source:MGI Symbol;Acc:MGI:1298405]
34. Srsf1 ENSMUSG00000018379, ENSMUSG00000098301 13087 0.765 - - 0.765 - - - serine/arginine-rich splicing factor 1 [Source:MGI Symbol;Acc:MGI:98283]
35. Akap13 ENSMUSG00000066406 3762 0.764 - 0.764 - - - - A kinase (PRKA) anchor protein 13 [Source:MGI Symbol;Acc:MGI:2676556]
36. Inppl1 ENSMUSG00000032737 2019 0.764 - 0.764 - - - - inositol polyphosphate phosphatase-like 1 [Source:MGI Symbol;Acc:MGI:1333787]
37. Sfpq ENSMUSG00000028820 29952 0.764 0.764 - - - - - splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated) [Source:MGI Symbol;Acc:MGI:1918764]
38. Ttc14 ENSMUSG00000027677 1816 0.763 - 0.763 - - - - tetratricopeptide repeat domain 14 [Source:MGI Symbol;Acc:MGI:1914370]
39. Epb4.1 Epb4.1 4344 0.763 - 0.763 - - - -
40. Dnajb6 ENSMUSG00000029131 2940 0.761 - 0.761 - - - - DnaJ heat shock protein family (Hsp40) member B6 [Source:MGI Symbol;Acc:MGI:1344381]
41. Ank2 ENSMUSG00000032826 2005 0.76 - 0.760 - - - - ankyrin 2, brain [Source:MGI Symbol;Acc:MGI:88025]
42. Litaf ENSMUSG00000022500 2501 0.76 - 0.760 - - - - LPS-induced TN factor [Source:MGI Symbol;Acc:MGI:1929512]
43. Eif4e ENSMUSG00000028156 12715 0.76 - 0.760 - - - - eukaryotic translation initiation factor 4E [Source:MGI Symbol;Acc:MGI:95305]
44. Zfhx4 ENSMUSG00000025255 6456 0.76 - - 0.760 - - - zinc finger homeodomain 4 [Source:MGI Symbol;Acc:MGI:2137668]
45. Tmem245 ENSMUSG00000055296 11794 0.759 - 0.759 - - - - transmembrane protein 245 [Source:MGI Symbol;Acc:MGI:2445107]
46. Mta1 ENSMUSG00000021144 7439 0.758 - 0.758 - - - - metastasis associated 1 [Source:MGI Symbol;Acc:MGI:2150037]
47. Furin ENSMUSG00000030530 4776 0.756 - 0.756 - - - - furin (paired basic amino acid cleaving enzyme) [Source:MGI Symbol;Acc:MGI:97513]
48. Btg2 ENSMUSG00000020423 1222 0.756 - 0.756 - - - - B cell translocation gene 2, anti-proliferative [Source:MGI Symbol;Acc:MGI:108384]
49. Kmt2c ENSMUSG00000038056 3022 0.756 - 0.756 - - - - lysine (K)-specific methyltransferase 2C [Source:MGI Symbol;Acc:MGI:2444959]
50. Matr3 ENSMUSG00000037236 11220 0.756 - - 0.756 - - - matrin 3 [Source:MGI Symbol;Acc:MGI:1298379]
51. Dcun1d1 ENSMUSG00000027708 2462 0.755 - 0.755 - - - - DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2150386]
52. Zic5 ENSMUSG00000041703 1240 0.755 - 0.755 - - - - zinc finger protein of the cerebellum 5 [Source:MGI Symbol;Acc:MGI:1929518]
53. Eif5a ENSMUSG00000078812 71171 0.753 - 0.753 - - - - eukaryotic translation initiation factor 5A [Source:MGI Symbol;Acc:MGI:106248]
54. Ap4e1 ENSMUSG00000001998 784 0.752 - 0.752 - - - - adaptor-related protein complex AP-4, epsilon 1 [Source:MGI Symbol;Acc:MGI:1336993]
55. Rictor ENSMUSG00000050310 1500 0.752 - 0.752 - - - - RPTOR independent companion of MTOR, complex 2 [Source:MGI Symbol;Acc:MGI:1926007]
56. Ndufaf7 ENSMUSG00000024082 1621 0.752 - 0.752 - - - - NADH:ubiquinone oxidoreductase complex assembly factor 7 [Source:MGI Symbol;Acc:MGI:1920944]
57. Gnaz ENSMUSG00000040009 721 0.752 - 0.752 - - - - guanine nucleotide binding protein, alpha z subunit [Source:MGI Symbol;Acc:MGI:95780]
58. Deb1 1520 0.752 - 0.752 - - - - differentially expressed in B16F10 1
59. 2010107G23Rik 528 0.752 - 0.752 - - - - RIKEN cDNA 2010107G23 gene, transcript variant X2
60. Mcm9 ENSMUSG00000058298 926 0.752 - 0.752 - - - - minichromosome maintenance 9 homologous recombination repair factor [Source:MGI Symbol;Acc:MGI:1918817]
61. Tnfrsf19 ENSMUSG00000060548 1055 0.752 - 0.752 - - - - tumor necrosis factor receptor superfamily, member 19 [Source:MGI Symbol;Acc:MGI:1352474]
62. Mylpf ENSMUSG00000030672 5024 0.752 - 0.752 - - - - myosin light chain, phosphorylatable, fast skeletal muscle [Source:MGI Symbol;Acc:MGI:97273]
63. Mmp15 ENSMUSG00000031790 650 0.751 - 0.751 - - - - matrix metallopeptidase 15 [Source:MGI Symbol;Acc:MGI:109320]
64. Btg1 ENSMUSG00000036478 3720 0.751 - 0.751 - - - - B cell translocation gene 1, anti-proliferative [Source:MGI Symbol;Acc:MGI:88215]
65. Zfp442 ENSMUSG00000068130 506 0.751 - 0.751 - - - - zinc finger protein 442 [Source:MGI Symbol;Acc:MGI:3651999]
66. Itpripl1 ENSMUSG00000074825 1029 0.751 - 0.751 - - - - inositol 1,4,5-triphosphate receptor interacting protein-like 1 [Source:MGI Symbol;Acc:MGI:1920588]
67. Cntn2 ENSMUSG00000053024 1798 0.751 - 0.751 - - - - contactin 2 [Source:MGI Symbol;Acc:MGI:104518]
68. Gm27010 ENSMUSG00000098183 452 0.751 - 0.751 - - - - predicted gene, 27010 [Source:MGI Symbol;Acc:MGI:5504125]
69. Hist1h2ao ENSMUSG00000094248 2177 0.751 - - 0.751 - - - histone cluster 1, H2ao [Source:MGI Symbol;Acc:MGI:2448302]
70. Gm26518 ENSMUSG00000097234 755 0.751 - 0.751 - - - - predicted gene, 26518 [Source:MGI Symbol;Acc:MGI:5477012]
71. Prr11 ENSMUSG00000020493 1512 0.751 - 0.751 - - - - proline rich 11 [Source:MGI Symbol;Acc:MGI:2444496]
72. Tram1l1 ENSMUSG00000044528 1124 0.751 - 0.751 - - - - translocation associated membrane protein 1-like 1 [Source:MGI Symbol;Acc:MGI:2443503]
73. Fosl2 ENSMUSG00000029135 686 0.75 - 0.750 - - - - fos-like antigen 2 [Source:MGI Symbol;Acc:MGI:102858]
74. Tef ENSMUSG00000022389 954 0.75 - 0.750 - - - - thyrotroph embryonic factor [Source:MGI Symbol;Acc:MGI:98663]
75. Vps13d ENSMUSG00000020220 900 0.75 - 0.750 - - - - vacuolar protein sorting 13D [Source:MGI Symbol;Acc:MGI:2448530]
76. AI837181 ENSMUSG00000047423 1106 0.75 - 0.750 - - - - expressed sequence AI837181 [Source:MGI Symbol;Acc:MGI:2147598]
77. Chd2 ENSMUSG00000078671 2287 0.749 - 0.749 - - - - chromodomain helicase DNA binding protein 2 [Source:MGI Symbol;Acc:MGI:2448567]
78. Yy1 ENSMUSG00000021264 5159 0.749 - - 0.749 - - - YY1 transcription factor [Source:MGI Symbol;Acc:MGI:99150]
79. Gas8 ENSMUSG00000040220 1218 0.749 - 0.749 - - - - growth arrest specific 8 [Source:MGI Symbol;Acc:MGI:1202386]
80. Ivd ENSMUSG00000027332 3209 0.749 - 0.749 - - - - isovaleryl coenzyme A dehydrogenase [Source:MGI Symbol;Acc:MGI:1929242]
81. Rps6ka6 ENSMUSG00000025665, ENSMUSG00000116203 6507 0.748 - 0.748 - - - - ribosomal protein S6 kinase polypeptide 6 [Source:MGI Symbol;Acc:MGI:1914321]
82. Cables1 ENSMUSG00000040957 820 0.748 - 0.748 - - - - CDK5 and Abl enzyme substrate 1 [Source:MGI Symbol;Acc:MGI:1927065]
83. Dlc1 ENSMUSG00000031523 2944 0.748 - 0.748 - - - - deleted in liver cancer 1 [Source:MGI Symbol;Acc:MGI:1354949]
84. Txndc17 ENSMUSG00000020803 3761 0.748 - 0.748 - - - - thioredoxin domain containing 17 [Source:MGI Symbol;Acc:MGI:1289248]
85. Pnpla6 ENSMUSG00000004565 1718 0.748 - 0.748 - - - - patatin-like phospholipase domain containing 6 [Source:MGI Symbol;Acc:MGI:1354723]
86. Pou2f1 ENSMUSG00000026565 3102 0.748 - 0.748 - - - - POU domain, class 2, transcription factor 1 [Source:MGI Symbol;Acc:MGI:101898]
87. Rragc ENSMUSG00000028646 3324 0.747 - 0.747 - - - - Ras-related GTP binding C [Source:MGI Symbol;Acc:MGI:1858751]
88. Zdbf2 ENSMUSG00000027520 3153 0.747 - 0.747 - - - - zinc finger, DBF-type containing 2 [Source:MGI Symbol;Acc:MGI:1921134]
89. Trnau1ap ENSMUSG00000028898 1182 0.747 - 0.747 - - - - tRNA selenocysteine 1 associated protein 1 [Source:MGI Symbol;Acc:MGI:1919037]
90. Clcn6 ENSMUSG00000029016 3403 0.745 - 0.745 - - - - chloride channel, voltage-sensitive 6 [Source:MGI Symbol;Acc:MGI:1347049]
91. Epcam ENSMUSG00000045394 749 0.745 - 0.745 - - - - epithelial cell adhesion molecule [Source:MGI Symbol;Acc:MGI:106653]
92. Nudt9 ENSMUSG00000029310 1755 0.743 - 0.743 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 9 [Source:MGI Symbol;Acc:MGI:1921417]
93. Ube3b ENSMUSG00000029577 2499 0.742 - 0.742 - - - - ubiquitin protein ligase E3B [Source:MGI Symbol;Acc:MGI:1891295]
94. Dnaja2 ENSMUSG00000031701 16608 0.742 - - 0.742 - - - DnaJ heat shock protein family (Hsp40) member A2 [Source:MGI Symbol;Acc:MGI:1931882]
95. Tspyl1 ENSMUSG00000047514 2858 0.741 - 0.741 - - - - testis-specific protein, Y-encoded-like 1 [Source:MGI Symbol;Acc:MGI:1298395]
96. Dsp ENSMUSG00000054889 1421 0.741 - 0.741 - - - - desmoplakin [Source:MGI Symbol;Acc:MGI:109611]
97. Mia3 ENSMUSG00000056050 10332 0.741 - 0.741 - - - - melanoma inhibitory activity 3 [Source:MGI Symbol;Acc:MGI:2443183]
98. Coro1b ENSMUSG00000024835, ENSMUSG00000097771 4253 0.74 - 0.740 - - - - coronin, actin binding protein 1B [Source:MGI Symbol;Acc:MGI:1345963]
99. Slc35a1 ENSMUSG00000028293 2450 0.74 - 0.740 - - - - solute carrier family 35 (CMP-sialic acid transporter), member 1 [Source:MGI Symbol;Acc:MGI:1345622]
100. Fam168b ENSMUSG00000037503 8271 0.74 - 0.740 - - - - family with sequence similarity 168, member B [Source:MGI Symbol;Acc:MGI:2448487]

There are 40 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA