Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Tnrc6a

Gene Name Gene ID Reads Annotation
Tnrc6a ENSMUSG00000052707 12706 trinucleotide repeat containing 6a [Source:MGI Symbol;Acc:MGI:2385292]







Genes with expression patterns similar to Tnrc6a

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Tnrc6a ENSMUSG00000052707 12706 6 1.000 1.000 1.000 1.000 1.000 1.000 trinucleotide repeat containing 6a [Source:MGI Symbol;Acc:MGI:2385292]
2. Med7 ENSMUSG00000020397 2247 1.512 0.756 0.756 - - - - mediator complex subunit 7 [Source:MGI Symbol;Acc:MGI:1913463]
3. Upf1 ENSMUSG00000058301 1982 1.487 0.713 0.774 - - - - UPF1 regulator of nonsense transcripts homolog (yeast) [Source:MGI Symbol;Acc:MGI:107995]
4. Gm6483 ENSMUSG00000087153 1875 1.482 0.719 0.763 - - - - predicted gene 6483 [Source:MGI Symbol;Acc:MGI:3644574]
5. Gpx1 ENSMUSG00000063856 7321 0.877 0.877 - - - - - glutathione peroxidase 1 [Source:MGI Symbol;Acc:MGI:104887]
6. Chsy1 ENSMUSG00000032640 6085 0.873 0.873 - - - - - chondroitin sulfate synthase 1 [Source:MGI Symbol;Acc:MGI:2681120]
7. Slirp ENSMUSG00000021040 10905 0.871 0.871 - - - - - SRA stem-loop interacting RNA binding protein [Source:MGI Symbol;Acc:MGI:1916394]
8. Smim15 ENSMUSG00000071180 3604 0.865 0.865 - - - - - small integral membrane protein 15 [Source:MGI Symbol;Acc:MGI:1922866]
9. Zbed4 ENSMUSG00000034333 2620 0.861 0.861 - - - - - zinc finger, BED type containing 4 [Source:MGI Symbol;Acc:MGI:2682302]
10. Tmem60 ENSMUSG00000045435 2595 0.857 - 0.857 - - - - transmembrane protein 60 [Source:MGI Symbol;Acc:MGI:2673965]
11. Carkd 1184 0.853 - 0.853 - - - - carbohydrate kinase domain containing, transcript variant X1
12. Lix1 ENSMUSG00000047786 1969 0.85 - 0.850 - - - - limb and CNS expressed 1 [Source:MGI Symbol;Acc:MGI:1913893]
13. Pank1 ENSMUSG00000033610 1083 0.84 - 0.840 - - - - pantothenate kinase 1 [Source:MGI Symbol;Acc:MGI:1922985]
14. Gm9864 ENSMUSG00000052005 829 0.84 0.840 - - - - - predicted gene 9864 [Source:MGI Symbol;Acc:MGI:3708663]
15. Ap3m1 ENSMUSG00000021824 4646 0.838 - 0.838 - - - - adaptor-related protein complex 3, mu 1 subunit [Source:MGI Symbol;Acc:MGI:1929212]
16. Dido1 ENSMUSG00000038914 1891 0.837 - 0.837 - - - - death inducer-obliterator 1 [Source:MGI Symbol;Acc:MGI:1344352]
17. Kif21a ENSMUSG00000022629 1223 0.836 0.836 - - - - - kinesin family member 21A [Source:MGI Symbol;Acc:MGI:109188]
18. Bnip3l ENSMUSG00000022051 3416 0.835 - 0.835 - - - - BCL2/adenovirus E1B interacting protein 3-like [Source:MGI Symbol;Acc:MGI:1332659]
19. Emc10 ENSMUSG00000008140 3651 0.835 - 0.835 - - - - ER membrane protein complex subunit 10 [Source:MGI Symbol;Acc:MGI:1916933]
20. Tm9sf3 ENSMUSG00000025016 5603 0.834 0.834 - - - - - transmembrane 9 superfamily member 3 [Source:MGI Symbol;Acc:MGI:1914262]
21. Smarcc1 ENSMUSG00000032481 8961 0.831 - 0.831 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 [Source:MGI Symbol;Acc:MGI:1203524]
22. Ndufb3 ENSMUSG00000026032 2795 0.831 - 0.831 - - - - NADH:ubiquinone oxidoreductase subunit B3 [Source:MGI Symbol;Acc:MGI:1913745]
23. Dpy19l4 ENSMUSG00000045205 962 0.829 - 0.829 - - - - dpy-19-like 4 (C. elegans) [Source:MGI Symbol;Acc:MGI:2685869]
24. Cyr61 ENSMUSG00000028195 563 0.828 - 0.828 - - - - cysteine rich protein 61 [Source:MGI Symbol;Acc:MGI:88613]
25. Prcc ENSMUSG00000004895 527 0.828 - 0.828 - - - - papillary renal cell carcinoma (translocation-associated) [Source:MGI Symbol;Acc:MGI:2137738]
26. Tapt1 ENSMUSG00000046985 1206 0.827 - 0.827 - - - - transmembrane anterior posterior transformation 1 [Source:MGI Symbol;Acc:MGI:2683537]
27. Gnpda2 ENSMUSG00000029209 182 0.827 - 0.827 - - - - glucosamine-6-phosphate deaminase 2 [Source:MGI Symbol;Acc:MGI:1915230]
28. Fam120aos ENSMUSG00000097059 81 0.826 - 0.826 - - - - family with sequence similarity 120A, opposite strand [Source:MGI Symbol;Acc:MGI:1915378]
29. 4933415A04Rik ENSMUSG00000045877 412 0.826 - 0.826 - - - - RIKEN cDNA 4933415A04 gene [Source:MGI Symbol;Acc:MGI:1922977]
30. Gm11944 ENSMUSG00000084941 286 0.826 - 0.826 - - - - predicted gene 11944 [Source:MGI Symbol;Acc:MGI:3702312]
31. Arhgap23 ENSMUSG00000049807 1316 0.825 - 0.825 - - - - Rho GTPase activating protein 23 [Source:MGI Symbol;Acc:MGI:3697726]
32. Zfp947 ENSMUSG00000063383 396 0.825 - 0.825 - - - - zinc finger protein 947 [Source:MGI Symbol;Acc:MGI:3646759]
33. Ccar2 ENSMUSG00000033712 2357 0.825 - 0.825 - - - - cell cycle activator and apoptosis regulator 2 [Source:MGI Symbol;Acc:MGI:2444228]
34. Pdgfb ENSMUSG00000000489 325 0.825 - 0.825 - - - - platelet derived growth factor, B polypeptide [Source:MGI Symbol;Acc:MGI:97528]
35. Gm16409 ENSMUSG00000075581 176 0.824 - 0.824 - - - - predicted gene 16409 [Source:MGI Symbol;Acc:MGI:3646708]
36. Med13l ENSMUSG00000018076 1863 0.824 - 0.824 - - - - mediator complex subunit 13-like [Source:MGI Symbol;Acc:MGI:2670178]
37. Gm4335 ENSMUSG00000097989 113 0.824 - 0.824 - - - - predicted gene 4335 [Source:MGI Symbol;Acc:MGI:3782519]
38. C2cd2l ENSMUSG00000032120 223 0.824 - 0.824 - - - - C2 calcium-dependent domain containing 2-like [Source:MGI Symbol;Acc:MGI:1919014]
39. Rfx5 ENSMUSG00000005774 204 0.824 - 0.824 - - - - regulatory factor X, 5 (influences HLA class II expression) [Source:MGI Symbol;Acc:MGI:1858421]
40. Itfg2 ENSMUSG00000001518 1233 0.823 - 0.823 - - - - integrin alpha FG-GAP repeat containing 2 [Source:MGI Symbol;Acc:MGI:1915450]
41. Ubox5 ENSMUSG00000027300 434 0.823 - 0.823 - - - - U box domain containing 5 [Source:MGI Symbol;Acc:MGI:2154658]
42. Irgm1 ENSMUSG00000046879, ENSMUSG00000116444 77 0.823 - 0.823 - - - - immunity-related GTPase family M member 1 [Source:NCBI gene;Acc:15944]
43. Scara5 ENSMUSG00000022032 68 0.823 - 0.823 - - - - scavenger receptor class A, member 5 [Source:MGI Symbol;Acc:MGI:1918395]
44. Gm10307 ENSMUSG00000101093 159 0.823 - 0.823 - - - - predicted gene 10307 [Source:MGI Symbol;Acc:MGI:3642371]
45. Slc16a9 ENSMUSG00000037762 83 0.822 - 0.822 - - - - solute carrier family 16 (monocarboxylic acid transporters), member 9 [Source:MGI Symbol;Acc:MGI:1914109]
46. Gm16300 ENSMUSG00000089828 225 0.822 - 0.822 - - - - predicted gene 16300 [Source:MGI Symbol;Acc:MGI:3826587]
47. Fam132b 102 0.822 - 0.822 - - - - family with sequence similarity 132, member B, transcript variant X3
48. Rrp15 ENSMUSG00000001305 966 0.822 - 0.822 - - - - ribosomal RNA processing 15 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914473]
49. Gm8349 ENSMUSG00000098208 124 0.822 - 0.822 - - - - predicted gene 8349 [Source:MGI Symbol;Acc:MGI:3643135]
50. 0610005C13Rik ENSMUSG00000109644 478 0.821 - 0.821 - - - - RIKEN cDNA 0610005C13 gene [Source:MGI Symbol;Acc:MGI:1918911]
51. Usf1 ENSMUSG00000026641 336 0.821 - 0.821 - - - - upstream transcription factor 1 [Source:MGI Symbol;Acc:MGI:99542]
52. Fam102b ENSMUSG00000040339 1195 0.821 - 0.821 - - - - family with sequence similarity 102, member B [Source:MGI Symbol;Acc:MGI:3036259]
53. Gm12005 ENSMUSG00000081631 601 0.821 - 0.821 - - - - predicted gene 12005 [Source:MGI Symbol;Acc:MGI:3651316]
54. Slc50a1 ENSMUSG00000027953 774 0.82 - 0.820 - - - - solute carrier family 50 (sugar transporter), member 1 [Source:MGI Symbol;Acc:MGI:107417]
55. Gm16702 ENSMUSG00000097796 133 0.82 - 0.820 - - - - predicted gene, 16702 [Source:MGI Symbol;Acc:MGI:4439626]
56. Gm26822 ENSMUSG00000096921 421 0.82 - 0.820 - - - - predicted gene, 26822 [Source:MGI Symbol;Acc:MGI:5477316]
57. Gm13652 ENSMUSG00000087333 91 0.82 - 0.820 - - - - predicted gene 13652 [Source:MGI Symbol;Acc:MGI:3650033]
58. Chfr ENSMUSG00000014668 1287 0.819 - 0.819 - - - - checkpoint with forkhead and ring finger domains [Source:MGI Symbol;Acc:MGI:2444898]
59. Eri3 ENSMUSG00000033423 3943 0.819 - 0.819 - - - - exoribonuclease 3 [Source:MGI Symbol;Acc:MGI:2153887]
60. Mcam ENSMUSG00000032135 610 0.818 - 0.818 - - - - melanoma cell adhesion molecule [Source:MGI Symbol;Acc:MGI:1933966]
61. Vps9d1 ENSMUSG00000001062 694 0.818 - 0.818 - - - - VPS9 domain containing 1 [Source:MGI Symbol;Acc:MGI:1914143]
62. Zfp609 ENSMUSG00000040524 1316 0.818 - 0.818 - - - - zinc finger protein 609 [Source:MGI Symbol;Acc:MGI:2674092]
63. Tgfbrap1 ENSMUSG00000070939 1413 0.818 - 0.818 - - - - transforming growth factor, beta receptor associated protein 1 [Source:MGI Symbol;Acc:MGI:2447427]
64. Rspo2 ENSMUSG00000051920 204 0.817 - 0.817 - - - - R-spondin 2 [Source:MGI Symbol;Acc:MGI:1922667]
65. Pigu ENSMUSG00000038383 705 0.817 - 0.817 - - - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:MGI Symbol;Acc:MGI:3039607]
66. AW209491 ENSMUSG00000039182 618 0.817 - 0.817 - - - - expressed sequence AW209491 [Source:MGI Symbol;Acc:MGI:2145422]
67. Actr3 ENSMUSG00000026341 4146 0.815 - 0.815 - - - - ARP3 actin-related protein 3 [Source:MGI Symbol;Acc:MGI:1921367]
68. Erlin1 ENSMUSG00000025198 667 0.815 - 0.815 - - - - ER lipid raft associated 1 [Source:MGI Symbol;Acc:MGI:2387613]
69. Tmem243 ENSMUSG00000079659 181 0.815 - 0.815 - - - - transmembrane protein 243, mitochondrial [Source:MGI Symbol;Acc:MGI:3606159]
70. Rrnad1 ENSMUSG00000004896 798 0.815 - 0.815 - - - - ribosomal RNA adenine dimethylase domain containing 1 [Source:MGI Symbol;Acc:MGI:2387197]
71. Gm15879 ENSMUSG00000084790 387 0.814 - 0.814 - - - - predicted gene 15879 [Source:MGI Symbol;Acc:MGI:3802012]
72. Sec11c ENSMUSG00000024516 640 0.814 - 0.814 - - - - SEC11 homolog C, signal peptidase complex subunit [Source:MGI Symbol;Acc:MGI:1913536]
73. Fndc3a ENSMUSG00000033487 1185 0.814 - 0.814 - - - - fibronectin type III domain containing 3A [Source:MGI Symbol;Acc:MGI:1196463]
74. Wnk3 ENSMUSG00000041245 552 0.814 - 0.814 - - - - WNK lysine deficient protein kinase 3 [Source:MGI Symbol;Acc:MGI:2652875]
75. Taf1b ENSMUSG00000059669 413 0.813 - 0.813 - - - - TATA-box binding protein associated factor, RNA polymerase I, B [Source:MGI Symbol;Acc:MGI:109577]
76. Atp8a1 ENSMUSG00000037685 1155 0.813 - 0.813 - - - - ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 [Source:MGI Symbol;Acc:MGI:1330848]
77. Rrp7a ENSMUSG00000018040 942 0.813 - 0.813 - - - - ribosomal RNA processing 7 homolog A (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1922028]
78. Phospho2 ENSMUSG00000027088 921 0.813 - 0.813 - - - - phosphatase, orphan 2 [Source:MGI Symbol;Acc:MGI:1920623]
79. Snapc3 ENSMUSG00000028483 2319 0.812 - 0.812 - - - - small nuclear RNA activating complex, polypeptide 3 [Source:MGI Symbol;Acc:MGI:1916338]
80. Tceal3 ENSMUSG00000044550 742 0.812 - 0.812 - - - - transcription elongation factor A (SII)-like 3 [Source:MGI Symbol;Acc:MGI:1913354]
81. Zfp407 ENSMUSG00000048410 2356 0.812 - 0.812 - - - - zinc finger protein 407 [Source:MGI Symbol;Acc:MGI:2685179]
82. Hmgn1 ENSMUSG00000040681 55060 0.812 0.812 - - - - - high mobility group nucleosomal binding domain 1 [Source:MGI Symbol;Acc:MGI:96120]
83. Dip2a ENSMUSG00000020231 649 0.811 - 0.811 - - - - disco interacting protein 2 homolog A [Source:MGI Symbol;Acc:MGI:2385920]
84. Pgap1 ENSMUSG00000073678 833 0.811 - 0.811 - - - - post-GPI attachment to proteins 1 [Source:MGI Symbol;Acc:MGI:2443342]
85. 4632434I11Rik 4632434I11Rik 951 0.811 - 0.811 - - - -
86. Evi5l ENSMUSG00000011832 691 0.811 - 0.811 - - - - ecotropic viral integration site 5 like [Source:MGI Symbol;Acc:MGI:2442167]
87. Lamtor2 ENSMUSG00000028062 570 0.81 - 0.810 - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:MGI Symbol;Acc:MGI:1932697]
88. Map10 ENSMUSG00000050930 246 0.81 - 0.810 - - - - microtubule-associated protein 10 [Source:MGI Symbol;Acc:MGI:1921643]
89. Gm10689 ENSMUSG00000074412 328 0.81 - 0.810 - - - - predicted gene 10689 [Source:MGI Symbol;Acc:MGI:3642613]
90. Nsun4 ENSMUSG00000028706 804 0.809 - 0.809 - - - - NOL1/NOP2/Sun domain family, member 4 [Source:MGI Symbol;Acc:MGI:1919431]
91. Gm16536 ENSMUSG00000089810 948 0.808 - 0.808 - - - - predicted gene 16536 [Source:MGI Symbol;Acc:MGI:4414956]
92. Aldh5a1 ENSMUSG00000035936 922 0.808 - 0.808 - - - - aldhehyde dehydrogenase family 5, subfamily A1 [Source:MGI Symbol;Acc:MGI:2441982]
93. Crcp ENSMUSG00000025532 699 0.808 - 0.808 - - - - calcitonin gene-related peptide-receptor component protein [Source:MGI Symbol;Acc:MGI:1100818]
94. Ednra ENSMUSG00000031616 1286 0.807 - 0.807 - - - - endothelin receptor type A [Source:MGI Symbol;Acc:MGI:105923]
95. Auh ENSMUSG00000021460 1425 0.807 - 0.807 - - - - AU RNA binding protein/enoyl-coenzyme A hydratase [Source:MGI Symbol;Acc:MGI:1338011]
96. Fam3c ENSMUSG00000029672 1429 0.806 - 0.806 - - - - family with sequence similarity 3, member C [Source:MGI Symbol;Acc:MGI:107892]
97. Usp2 ENSMUSG00000032010 525 0.806 - 0.806 - - - - ubiquitin specific peptidase 2 [Source:MGI Symbol;Acc:MGI:1858178]
98. Rpl36 ENSMUSG00000057863 918 0.806 - 0.806 - - - - ribosomal protein L36 [Source:MGI Symbol;Acc:MGI:1860603]
99. Mtx3 ENSMUSG00000021704 616 0.806 - 0.806 - - - - metaxin 3 [Source:MGI Symbol;Acc:MGI:2686040]
100. Pan2 ENSMUSG00000005682 912 0.805 - 0.805 - - - - PAN2 poly(A) specific ribonuclease subunit [Source:MGI Symbol;Acc:MGI:1918984]

There are 357 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA