Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Mouse data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for Tnnt1

Gene Name Gene ID Reads Annotation
Tnnt1 ENSMUSG00000064179 836 troponin T1, skeletal, slow [Source:MGI Symbol;Acc:MGI:1333868]







Genes with expression patterns similar to Tnnt1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Tnnt1 ENSMUSG00000064179 836 6 1.000 1.000 1.000 1.000 1.000 1.000 troponin T1, skeletal, slow [Source:MGI Symbol;Acc:MGI:1333868]
2. Myog ENSMUSG00000026459 855 3.806 - 0.702 0.704 0.716 0.909 0.775 myogenin [Source:MGI Symbol;Acc:MGI:97276]
3. Actc1 ENSMUSG00000068614 13555 3.297 - - 0.720 0.812 0.906 0.859 actin, alpha, cardiac muscle 1 [Source:MGI Symbol;Acc:MGI:87905]
4. Myl1 ENSMUSG00000061816 2895 3.261 - - 0.711 0.804 0.884 0.862 myosin, light polypeptide 1 [Source:MGI Symbol;Acc:MGI:97269]
5. Fibin ENSMUSG00000074971 907 3.24 - 0.760 0.783 - 0.850 0.847 fin bud initiation factor homolog (zebrafish) [Source:MGI Symbol;Acc:MGI:1914856]
6. Ttn ENSMUSG00000051747 3015 2.439 - - - 0.761 0.847 0.831 titin [Source:MGI Symbol;Acc:MGI:98864]
7. Tpm2 ENSMUSG00000028464 1803 2.313 - - - 0.762 0.840 0.711 tropomyosin 2, beta [Source:MGI Symbol;Acc:MGI:98810]
8. Myh3 ENSMUSG00000020908 1729 2.288 - - - 0.700 0.845 0.743 myosin, heavy polypeptide 3, skeletal muscle, embryonic [Source:MGI Symbol;Acc:MGI:1339709]
9. Myl4 ENSMUSG00000061086 819 2.26 - - - 0.711 0.801 0.748 myosin, light polypeptide 4 [Source:MGI Symbol;Acc:MGI:97267]
10. Rbm24 ENSMUSG00000038132 634 2.225 - - 0.737 - 0.785 0.703 RNA binding motif protein 24 [Source:MGI Symbol;Acc:MGI:3610364]
11. Casq2 ENSMUSG00000027861 587 2.214 - - - 0.720 0.728 0.766 calsequestrin 2 [Source:MGI Symbol;Acc:MGI:1309469]
12. Mylpf ENSMUSG00000030672 5024 1.627 - - - 0.782 0.845 - myosin light chain, phosphorylatable, fast skeletal muscle [Source:MGI Symbol;Acc:MGI:97273]
13. Tnnc1 ENSMUSG00000091898 572 1.595 - - - - 0.822 0.773 troponin C, cardiac/slow skeletal [Source:MGI Symbol;Acc:MGI:98779]
14. Wnt5a ENSMUSG00000021994 2387 1.589 - - - 0.813 - 0.776 wingless-type MMTV integration site family, member 5A [Source:MGI Symbol;Acc:MGI:98958]
15. Neb ENSMUSG00000026950 948 1.589 - - - - 0.843 0.746 nebulin [Source:MGI Symbol;Acc:MGI:97292]
16. Acta1 ENSMUSG00000031972 1386 1.553 - - - 0.733 0.820 - actin, alpha 1, skeletal muscle [Source:MGI Symbol;Acc:MGI:87902]
17. Tnnc2 ENSMUSG00000017300 2196 1.526 - - - - 0.807 0.719 troponin C2, fast [Source:MGI Symbol;Acc:MGI:98780]
18. Cdh15 ENSMUSG00000031962 318 1.516 - 0.812 - - - 0.704 cadherin 15 [Source:MGI Symbol;Acc:MGI:106672]
19. Cdkn1c ENSMUSG00000037664 49550 1.514 - - - - 0.740 0.774 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
20. 9130206I24Rik 9130206I24Rik 386 1.502 - - - 0.743 - 0.759
21. Tcf15 ENSMUSG00000068079 1156 1.473 - - 0.741 - 0.732 - transcription factor 15 [Source:MGI Symbol;Acc:MGI:104664]
22. Foxd1 ENSMUSG00000078302 2176 1.46 - 0.746 - 0.714 - - forkhead box D1 [Source:MGI Symbol;Acc:MGI:1347463]
23. Meox1 ENSMUSG00000001493 3105 1.443 - - 0.726 - - 0.717 mesenchyme homeobox 1 [Source:MGI Symbol;Acc:MGI:103220]
24. Ablim3 ENSMUSG00000032735 497 1.437 - - - - 0.735 0.702 actin binding LIM protein family, member 3 [Source:MGI Symbol;Acc:MGI:2442582]
25. Gm4217 ENSMUSG00000097954 30 0.986 0.986 - - - - - predicted gene 4217 [Source:MGI Symbol;Acc:MGI:3782393]
26. Lurap1l ENSMUSG00000048706 165 0.985 0.985 - - - - - leucine rich adaptor protein 1-like [Source:MGI Symbol;Acc:MGI:106510]
27. Slc13a4 ENSMUSG00000029843 66 0.984 0.984 - - - - - solute carrier family 13 (sodium/sulfate symporters), member 4 [Source:MGI Symbol;Acc:MGI:2442367]
28. Gm5697 ENSMUSG00000081557 24 0.984 0.984 - - - - - predicted gene 5697 [Source:MGI Symbol;Acc:MGI:3649021]
29. Gm5073 ENSMUSG00000083140 19 0.984 0.984 - - - - - predicted pseudogene 5073 [Source:MGI Symbol;Acc:MGI:3643718]
30. Fads3 ENSMUSG00000024664 192 0.983 0.983 - - - - - fatty acid desaturase 3 [Source:MGI Symbol;Acc:MGI:1928740]
31. Gm11531 ENSMUSG00000075587 27 0.983 0.983 - - - - - predicted gene 11531 [Source:MGI Symbol;Acc:MGI:3650260]
32. Gm4353 ENSMUSG00000091900 44 0.983 0.983 - - - - - predicted gene 4353 [Source:MGI Symbol;Acc:MGI:3782538]
33. Lrrc4b ENSMUSG00000047085 349 0.982 0.982 - - - - - leucine rich repeat containing 4B [Source:MGI Symbol;Acc:MGI:3027390]
34. Serpinb1b ENSMUSG00000051029 30 0.981 0.981 - - - - - serine (or cysteine) peptidase inhibitor, clade B, member 1b [Source:MGI Symbol;Acc:MGI:2445361]
35. Lamp5 ENSMUSG00000027270 112 0.981 0.981 - - - - - lysosomal-associated membrane protein family, member 5 [Source:MGI Symbol;Acc:MGI:1923411]
36. Smc1b ENSMUSG00000022432 39 0.981 0.981 - - - - - structural maintenance of chromosomes 1B [Source:MGI Symbol;Acc:MGI:2154049]
37. Samd15 ENSMUSG00000090812 66 0.979 0.979 - - - - - sterile alpha motif domain containing 15 [Source:MGI Symbol;Acc:MGI:2685109]
38. Gm14951 ENSMUSG00000084776 22 0.979 0.979 - - - - - predicted gene 14951 [Source:MGI Symbol;Acc:MGI:3705251]
39. 4930441O14Rik 4930441O14Rik 43 0.978 0.978 - - - - -
40. 3010001F23Rik ENSMUSG00000084885 157 0.977 0.977 - - - - - RIKEN cDNA 3010001F23 gene [Source:MGI Symbol;Acc:MGI:1922943]
41. Rasl12 ENSMUSG00000041696 228 0.977 0.977 - - - - - RAS-like, family 12 [Source:MGI Symbol;Acc:MGI:1918034]
42. Prl3b1 ENSMUSG00000038891 69 0.973 0.973 - - - - - prolactin family 3, subfamily b, member 1 [Source:MGI Symbol;Acc:MGI:97607]
43. Gm15443 ENSMUSG00000082588 32 0.972 0.972 - - - - - predicted gene 15443 [Source:MGI Symbol;Acc:MGI:3642525]
44. Gm26659 ENSMUSG00000097609 40 0.971 0.971 - - - - - predicted gene, 26659 [Source:MGI Symbol;Acc:MGI:5477153]
45. Thg1l ENSMUSG00000011254 324 0.971 0.971 - - - - - tRNA-histidine guanylyltransferase 1-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1913878]
46. Ripk3 ENSMUSG00000022221 346 0.969 0.969 - - - - - receptor-interacting serine-threonine kinase 3 [Source:MGI Symbol;Acc:MGI:2154952]
47. Lrrc27 ENSMUSG00000015980, ENSMUSG00000111011 83 0.968 0.968 - - - - - leucine rich repeat containing 27 [Source:MGI Symbol;Acc:MGI:1923862]
48. Serpini1 ENSMUSG00000027834 289 0.966 0.966 - - - - - serine (or cysteine) peptidase inhibitor, clade I, member 1 [Source:MGI Symbol;Acc:MGI:1194506]
49. Cd68 ENSMUSG00000018774 174 0.965 0.965 - - - - - CD68 antigen [Source:MGI Symbol;Acc:MGI:88342]
50. Zfp689 ENSMUSG00000048921 105 0.963 0.963 - - - - - zinc finger protein 689 [Source:MGI Symbol;Acc:MGI:1918381]
51. Gm9776 ENSMUSG00000042857 174 0.963 0.963 - - - - - predicted gene 9776 [Source:MGI Symbol;Acc:MGI:3641792]
52. Actl6a ENSMUSG00000027671 174 0.963 0.963 - - - - - actin-like 6A [Source:MGI Symbol;Acc:MGI:1861453]
53. Ecscr ENSMUSG00000073599 244 0.962 0.962 - - - - - endothelial cell surface expressed chemotaxis and apoptosis regulator [Source:MGI Symbol;Acc:MGI:1915795]
54. Pex14 ENSMUSG00000028975 920 0.962 0.962 - - - - - peroxisomal biogenesis factor 14 [Source:MGI Symbol;Acc:MGI:1927868]
55. 4632404H12Rik ENSMUSG00000042579 118 0.959 0.959 - - - - - RIKEN cDNA 4632404H12 gene [Source:MGI Symbol;Acc:MGI:1921284]
56. Ogfrl1 ENSMUSG00000026158 1984 0.956 0.956 - - - - - opioid growth factor receptor-like 1 [Source:MGI Symbol;Acc:MGI:1917405]
57. Tmem87a ENSMUSG00000033808 199 0.953 0.953 - - - - - transmembrane protein 87A [Source:MGI Symbol;Acc:MGI:2441844]
58. Naglu ENSMUSG00000001751 142 0.951 0.951 - - - - - alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB) [Source:MGI Symbol;Acc:MGI:1351641]
59. Gm11496 ENSMUSG00000085152 340 0.95 0.950 - - - - - predicted gene 11496 [Source:MGI Symbol;Acc:MGI:3649410]
60. Ces2b ENSMUSG00000050097 81 0.949 0.949 - - - - - carboxyesterase 2B [Source:MGI Symbol;Acc:MGI:2448547]
61. Tbc1d23 ENSMUSG00000022749 1006 0.947 0.947 - - - - - TBC1 domain family, member 23 [Source:MGI Symbol;Acc:MGI:1914831]
62. Mfsd1 ENSMUSG00000027775 1963 0.947 0.947 - - - - - major facilitator superfamily domain containing 1 [Source:MGI Symbol;Acc:MGI:1914118]
63. Srgn ENSMUSG00000020077 553 0.945 0.945 - - - - - serglycin [Source:MGI Symbol;Acc:MGI:97756]
64. E330009J07Rik ENSMUSG00000037172 461 0.942 0.942 - - - - - RIKEN cDNA E330009J07 gene [Source:MGI Symbol;Acc:MGI:2444256]
65. Gm26869 ENSMUSG00000097879 104 0.94 0.940 - - - - - predicted gene, 26869 [Source:MGI Symbol;Acc:MGI:5477363]
66. Znhit3 ENSMUSG00000020526 457 0.938 0.938 - - - - - zinc finger, HIT type 3 [Source:MGI Symbol;Acc:MGI:3051596]
67. Slc38a7 ENSMUSG00000036534 269 0.938 0.938 - - - - - solute carrier family 38, member 7 [Source:MGI Symbol;Acc:MGI:2679005]
68. Gabbr1 ENSMUSG00000024462 2045 0.937 0.937 - - - - - gamma-aminobutyric acid (GABA) B receptor, 1 [Source:MGI Symbol;Acc:MGI:1860139]
69. Itpripl2 ENSMUSG00000095115 287 0.937 0.937 - - - - - inositol 1,4,5-triphosphate receptor interacting protein-like 2 [Source:MGI Symbol;Acc:MGI:2442416]
70. Slc17a9 ENSMUSG00000023393 165 0.936 0.936 - - - - - solute carrier family 17, member 9 [Source:MGI Symbol;Acc:MGI:1919107]
71. Marf1 ENSMUSG00000060657 365 0.936 0.936 - - - - - meiosis regulator and mRNA stability 1 [Source:MGI Symbol;Acc:MGI:2444505]
72. Slc22a15 ENSMUSG00000033147 417 0.936 0.936 - - - - - solute carrier family 22 (organic anion/cation transporter), member 15 [Source:MGI Symbol;Acc:MGI:3607704]
73. Pigl ENSMUSG00000014245 165 0.935 0.935 - - - - - phosphatidylinositol glycan anchor biosynthesis, class L [Source:MGI Symbol;Acc:MGI:2681271]
74. Lhx6 ENSMUSG00000026890 107 0.935 0.935 - - - - - LIM homeobox protein 6 [Source:MGI Symbol;Acc:MGI:1306803]
75. Vwf ENSMUSG00000001930 658 0.934 0.934 - - - - - Von Willebrand factor [Source:MGI Symbol;Acc:MGI:98941]
76. Fcor ENSMUSG00000089665 178 0.934 0.934 - - - - - Foxo1 corepressor [Source:MGI Symbol;Acc:MGI:1915484]
77. Ceacam1 ENSMUSG00000074272 190 0.931 0.931 - - - - - carcinoembryonic antigen-related cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1347245]
78. Vamp2 ENSMUSG00000020894 1819 0.931 0.931 - - - - - vesicle-associated membrane protein 2 [Source:MGI Symbol;Acc:MGI:1313277]
79. Mfap3l ENSMUSG00000031647 247 0.93 0.930 - - - - - microfibrillar-associated protein 3-like [Source:MGI Symbol;Acc:MGI:1918556]
80. Isca1 ENSMUSG00000044792 248 0.929 0.929 - - - - - iron-sulfur cluster assembly 1 [Source:MGI Symbol;Acc:MGI:1916296]
81. Lins Lins 913 0.928 0.928 - - - - -
82. Gm25072 ENSMUSG00000092974 251 0.927 0.927 - - - - - predicted gene, 25072 [Source:MGI Symbol;Acc:MGI:5454849]
83. Pnpo ENSMUSG00000018659 322 0.927 0.927 - - - - - pyridoxine 5'-phosphate oxidase [Source:MGI Symbol;Acc:MGI:2144151]
84. Aff2 ENSMUSG00000031189 271 0.924 0.924 - - - - - AF4/FMR2 family, member 2 [Source:MGI Symbol;Acc:MGI:1202294]
85. Smim11 ENSMUSG00000051989 1776 0.922 0.922 - - - - - small integral membrane protein 11 [Source:MGI Symbol;Acc:MGI:1916186]
86. E130307A14Rik ENSMUSG00000087177 1348 0.922 0.922 - - - - - RIKEN cDNA E130307A14 gene [Source:MGI Symbol;Acc:MGI:3036287]
87. 6430590A07Rik ENSMUSG00000097583, ENSMUSG00000116278 241 0.922 0.922 - - - - - RIKEN cDNA 6430590A07 gene [Source:MGI Symbol;Acc:MGI:3648839]
88. Gm11826 ENSMUSG00000083328 131 0.921 0.921 - - - - - predicted gene 11826 [Source:MGI Symbol;Acc:MGI:3651142]
89. Dhrs13 ENSMUSG00000020834 657 0.921 0.921 - - - - - dehydrogenase/reductase (SDR family) member 13 [Source:MGI Symbol;Acc:MGI:1917701]
90. Zfp398 ENSMUSG00000062519 315 0.918 0.918 - - - - - zinc finger protein 398 [Source:MGI Symbol;Acc:MGI:1917856]
91. Ddit4 ENSMUSG00000020108 411 0.917 0.917 - - - - - DNA-damage-inducible transcript 4 [Source:MGI Symbol;Acc:MGI:1921997]
92. Acox3 ENSMUSG00000029098 279 0.916 0.916 - - - - - acyl-Coenzyme A oxidase 3, pristanoyl [Source:MGI Symbol;Acc:MGI:1933156]
93. 4930512M02Rik ENSMUSG00000062511 97 0.915 0.915 - - - - - RIKEN cDNA 4930512M02 gene [Source:MGI Symbol;Acc:MGI:1922360]
94. Ankrd52 ENSMUSG00000014498 262 0.915 0.915 - - - - - ankyrin repeat domain 52 [Source:MGI Symbol;Acc:MGI:2444029]
95. Npas4 ENSMUSG00000045903 62 0.911 0.911 - - - - - neuronal PAS domain protein 4 [Source:MGI Symbol;Acc:MGI:2664186]
96. Srr ENSMUSG00000001323 373 0.911 0.911 - - - - - serine racemase [Source:MGI Symbol;Acc:MGI:1351636]
97. Gm14286 ENSMUSG00000087445 166 0.91 0.910 - - - - - predicted gene 14286 [Source:MGI Symbol;Acc:MGI:3650190]
98. Sema6d ENSMUSG00000027200 1413 0.907 0.907 - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:MGI Symbol;Acc:MGI:2387661]
99. Vav3 ENSMUSG00000033721 527 0.906 0.906 - - - - - vav 3 oncogene [Source:MGI Symbol;Acc:MGI:1888518]
100. Nr3c1 ENSMUSG00000024431 672 0.905 0.905 - - - - - nuclear receptor subfamily 3, group C, member 1 [Source:MGI Symbol;Acc:MGI:95824]

There are 237 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA