Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for Tnnc1

Gene Name Gene ID Reads Annotation
Tnnc1 ENSMUSG00000091898 572 troponin C, cardiac/slow skeletal [Source:MGI Symbol;Acc:MGI:98779]







Genes with expression patterns similar to Tnnc1

Nr. Gene Name Gene ID Reads Σ scores E10 5 slice 1 E10 5 slice 2 E10 5 slice 3 E11 5 slice 1 E11 5 slice 2 E11 5 slice 3 Annotation
1. Tnnc1 ENSMUSG00000091898 572 6 1.000 1.000 1.000 1.000 1.000 1.000 troponin C, cardiac/slow skeletal [Source:MGI Symbol;Acc:MGI:98779]
2. Actc1 ENSMUSG00000068614 13555 2.366 - - - 0.709 0.853 0.804 actin, alpha, cardiac muscle 1 [Source:MGI Symbol;Acc:MGI:87905]
3. Sln ENSMUSG00000042045 405 2.365 - 0.750 0.776 - 0.839 - sarcolipin [Source:MGI Symbol;Acc:MGI:1913652]
4. Tnnt2 ENSMUSG00000026414 1982 2.345 - 0.709 - - 0.824 0.812 troponin T2, cardiac [Source:MGI Symbol;Acc:MGI:104597]
5. Tnnc2 ENSMUSG00000017300 2196 2.333 - - - 0.718 0.777 0.838 troponin C2, fast [Source:MGI Symbol;Acc:MGI:98780]
6. Synpo2l ENSMUSG00000039376 565 2.281 0.776 - - - 0.746 0.759 synaptopodin 2-like [Source:MGI Symbol;Acc:MGI:1916010]
7. Chrnb1 ENSMUSG00000041189 253 2.168 - 0.703 - - 0.743 0.722 cholinergic receptor, nicotinic, beta polypeptide 1 (muscle) [Source:MGI Symbol;Acc:MGI:87890]
8. Myog ENSMUSG00000026459 855 1.649 - - - - 0.852 0.797 myogenin [Source:MGI Symbol;Acc:MGI:97276]
9. Myh3 ENSMUSG00000020908 1729 1.639 - - - - 0.776 0.863 myosin, heavy polypeptide 3, skeletal muscle, embryonic [Source:MGI Symbol;Acc:MGI:1339709]
10. Myl1 ENSMUSG00000061816 2895 1.639 - - - - 0.872 0.767 myosin, light polypeptide 1 [Source:MGI Symbol;Acc:MGI:97269]
11. Acta1 ENSMUSG00000031972 1386 1.62 - - - - 0.795 0.825 actin, alpha 1, skeletal muscle [Source:MGI Symbol;Acc:MGI:87902]
12. Neb ENSMUSG00000026950 948 1.614 - - - - 0.848 0.766 nebulin [Source:MGI Symbol;Acc:MGI:97292]
13. Myl4 ENSMUSG00000061086 819 1.606 - - - - 0.790 0.816 myosin, light polypeptide 4 [Source:MGI Symbol;Acc:MGI:97267]
14. Ttn ENSMUSG00000051747 3015 1.603 - - - - 0.737 0.866 titin [Source:MGI Symbol;Acc:MGI:98864]
15. Tnnt1 ENSMUSG00000064179 836 1.595 - - - - 0.822 0.773 troponin T1, skeletal, slow [Source:MGI Symbol;Acc:MGI:1333868]
16. Tpm2 ENSMUSG00000028464 1803 1.595 - - - - 0.841 0.754 tropomyosin 2, beta [Source:MGI Symbol;Acc:MGI:98810]
17. Fibin ENSMUSG00000074971 907 1.585 - - - - 0.790 0.795 fin bud initiation factor homolog (zebrafish) [Source:MGI Symbol;Acc:MGI:1914856]
18. Mylpf ENSMUSG00000030672 5024 1.579 - - 0.745 - 0.834 - myosin light chain, phosphorylatable, fast skeletal muscle [Source:MGI Symbol;Acc:MGI:97273]
19. Casq2 ENSMUSG00000027861 587 1.471 - - - - 0.708 0.763 calsequestrin 2 [Source:MGI Symbol;Acc:MGI:1309469]
20. Tmem8c 204 1.467 - - - - 0.700 0.767 transmembrane protein 8C, transcript variant 1
21. Cdkn1c ENSMUSG00000037664 49550 1.42 - - - - 0.702 0.718 cyclin-dependent kinase inhibitor 1C (P57) [Source:MGI Symbol;Acc:MGI:104564]
22. Osr1 ENSMUSG00000048387 855 0.811 - - - - 0.811 - odd-skipped related transcription factor 1 [Source:MGI Symbol;Acc:MGI:1344424]
23. Myf5 ENSMUSG00000000435 593 0.806 - - - - - 0.806 myogenic factor 5 [Source:MGI Symbol;Acc:MGI:97252]
24. Tnni1 ENSMUSG00000026418 1139 0.787 - - - - - 0.787 troponin I, skeletal, slow 1 [Source:MGI Symbol;Acc:MGI:105073]
25. Meox1 ENSMUSG00000001493 3105 0.776 - - - - - 0.776 mesenchyme homeobox 1 [Source:MGI Symbol;Acc:MGI:103220]
26. Myh7 ENSMUSG00000053093 156 0.759 - - - - - 0.759 myosin, heavy polypeptide 7, cardiac muscle, beta [Source:MGI Symbol;Acc:MGI:2155600]
27. Mef2c ENSMUSG00000005583 2710 0.742 - - - - - 0.742 myocyte enhancer factor 2C [Source:MGI Symbol;Acc:MGI:99458]
28. Mustn1 ENSMUSG00000042485 163 0.741 - - - - - 0.741 musculoskeletal, embryonic nuclear protein 1 [Source:MGI Symbol;Acc:MGI:1913425]
29. Myod1 ENSMUSG00000009471 536 0.739 - - - - 0.739 - myogenic differentiation 1 [Source:MGI Symbol;Acc:MGI:97275]
30. Srl ENSMUSG00000022519 577 0.738 - - - - - 0.738 sarcalumenin [Source:MGI Symbol;Acc:MGI:2146620]
31. Hfe2 ENSMUSG00000038403 372 0.727 - - - - - 0.727 hemochromatosis type 2 (juvenile) [Source:MGI Symbol;Acc:MGI:1916835]
32. Pygm ENSMUSG00000032648, ENSMUSG00000106877 531 0.726 - - - - 0.726 - muscle glycogen phosphorylase [Source:MGI Symbol;Acc:MGI:97830]
33. Foxd1 ENSMUSG00000078302 2176 0.725 - - - - - 0.725 forkhead box D1 [Source:MGI Symbol;Acc:MGI:1347463]
34. Tcf15 ENSMUSG00000068079 1156 0.723 - - - - 0.723 - transcription factor 15 [Source:MGI Symbol;Acc:MGI:104664]
35. Cryab ENSMUSG00000032060 732 0.722 - - - - 0.722 - crystallin, alpha B [Source:MGI Symbol;Acc:MGI:88516]
36. Foxd2 ENSMUSG00000055210 465 0.717 - - - - 0.717 - forkhead box D2 [Source:MGI Symbol;Acc:MGI:1347471]
37. Sncaip ENSMUSG00000024534 463 0.717 - - 0.717 - - - synuclein, alpha interacting protein (synphilin) [Source:MGI Symbol;Acc:MGI:1915097]
38. C1qtnf3 ENSMUSG00000058914 1227 0.717 - - - - - 0.717 C1q and tumor necrosis factor related protein 3 [Source:MGI Symbol;Acc:MGI:1932136]
39. Klhl41 ENSMUSG00000075307 333 0.715 - - - - - 0.715 kelch-like 41 [Source:MGI Symbol;Acc:MGI:2683854]
40. Col19a1 ENSMUSG00000026141 77 0.715 - 0.715 - - - - collagen, type XIX, alpha 1 [Source:MGI Symbol;Acc:MGI:1095415]
41. Col25a1 ENSMUSG00000058897 866 0.715 - - - - 0.715 - collagen, type XXV, alpha 1 [Source:MGI Symbol;Acc:MGI:1924268]
42. Grin3a ENSMUSG00000039579 433 0.712 - - - - 0.712 - glutamate receptor ionotropic, NMDA3A [Source:MGI Symbol;Acc:MGI:1933206]
43. Ptpro ENSMUSG00000030223 65 0.712 0.712 - - - - - protein tyrosine phosphatase, receptor type, O [Source:MGI Symbol;Acc:MGI:1097152]
44. Gm10184 ENSMUSG00000066878 370 0.71 - - 0.710 - - - predicted pseudogene 10184 [Source:MGI Symbol;Acc:MGI:3704480]
45. Ablim3 ENSMUSG00000032735 497 0.708 - - - - 0.708 - actin binding LIM protein family, member 3 [Source:MGI Symbol;Acc:MGI:2442582]
46. Sox2ot ENSMUSG00000105265 475 0.708 0.708 - - - - - SOX2 overlapping transcript (non-protein coding) [Source:MGI Symbol;Acc:MGI:2444112]
47. Rbm24 ENSMUSG00000038132 634 0.707 - - - - - 0.707 RNA binding motif protein 24 [Source:MGI Symbol;Acc:MGI:3610364]
48. Dmrt2 ENSMUSG00000048138 949 0.706 - 0.706 - - - - doublesex and mab-3 related transcription factor 2 [Source:MGI Symbol;Acc:MGI:1330307]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA