Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TYMS

Gene Name Gene ID Reads Annotation
TYMS ENSGALG00000014897 20484 thymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]











Genes with expression patterns similar to TYMS

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TYMS ENSGALG00000014897 20484 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 thymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]
2. EPCAM ENSGALG00000008969 10014 1.877 - - - - - - 0.940 0.937 - - epithelial cell adhesion molecule [Source:NCBI gene;Acc:421292]
3. CAPZB ENSGALG00000004034 19630 0.98 - - - - - - 0.980 - - - capping actin protein of muscle Z-line beta subunit [Source:NCBI gene;Acc:396418]
4. CDC42SE1 ENSGALG00000028119 14813 0.979 - - - - - - 0.979 - - - CDC42 small effector 1 [Source:HGNC Symbol;Acc:HGNC:17719]
5. EIF3E ENSGALG00000037067 36561 0.973 - - - - - - 0.973 - - - eukaryotic translation initiation factor 3 subunit E [Source:NCBI gene;Acc:420272]
6. HSPD1 ENSGALG00000008094 40870 0.966 - - - - - - 0.966 - - - heat shock protein family D (Hsp60) member 1 [Source:NCBI gene;Acc:424059]
7. PNRC1 ENSGALG00000015780 75894 0.95 - - - - - - 0.950 - - - proline rich nuclear receptor coactivator 1 [Source:NCBI gene;Acc:421817]
8. POLR2L ENSGALG00000006841 33915 0.948 - - - - - - 0.948 - - - RNA polymerase II subunit L [Source:NCBI gene;Acc:770704]
9. GDI2 ENSGALG00000008169 67151 0.945 - - - - - - 0.945 - - - GDP dissociation inhibitor 2 [Source:NCBI gene;Acc:395854]
10. FAM72A ENSGALG00000000791 17723 0.944 - - - - - - 0.944 - - - family with sequence similarity 72 member A, transcript variant X1
11. PDAP1 ENSGALG00000036552 28881 0.944 - - - - - - 0.944 - - - PDGFA associated protein 1 [Source:HGNC Symbol;Acc:HGNC:14634]
12. COX7B ENSGALG00000007863 59194 0.943 - - - - - - 0.943 - - - cytochrome c oxidase subunit 7B [Source:NCBI gene;Acc:771947]
13. MAP3K4 ENSGALG00000020003 6378 0.942 - - - - - - 0.942 - - - mitogen-activated protein kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6856]
14. ELP3 ENSGALG00000016624 4483 0.942 - - - - - - 0.942 - - - elongator acetyltransferase complex subunit 3 [Source:NCBI gene;Acc:422021]
15. C5orf22 ENSGALG00000012909 3537 0.942 - - - - - - 0.942 - - - chromosome 5 open reading frame 22 [Source:HGNC Symbol;Acc:HGNC:25639]
16. SEC62 ENSGALG00000009379 15745 0.942 - - - - - - 0.942 - - - SEC62 homolog, preprotein translocation factor [Source:NCBI gene;Acc:424993]
17. PSIP1 ENSGALG00000015105 8322 0.941 - - - - - - 0.941 - - - PC4 and SFRS1 interacting protein 1 [Source:NCBI gene;Acc:431605]
18. UBLCP1 ENSGALG00000003672 9332 0.941 - - - - - - 0.941 - - - ubiquitin like domain containing CTD phosphatase 1 [Source:NCBI gene;Acc:416237]
19. ISY1 ENSGALG00000005012 7477 0.941 - - - - - - 0.941 - - - ISY1 splicing factor homolog
20. ZWILCH ENSGALG00000007736 4939 0.941 - - - - - - 0.941 - - - zwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]
21. MTRR ENSGALG00000039424 3197 0.941 - - - - - - 0.941 - - - 5-methyltetrahydrofolate-homocysteine methyltransferase reductase [Source:HGNC Symbol;Acc:HGNC:7473]
22. HINT3 ENSGALG00000044342 5674 0.94 - - - - - - 0.940 - - - histidine triad nucleotide binding protein 3 [Source:HGNC Symbol;Acc:HGNC:18468]
23. NAE1 ENSGALG00000038957 13777 0.94 - - - - - - 0.940 - - - NEDD8 activating enzyme E1 subunit 1 [Source:NCBI gene;Acc:415792]
24. SUPT4H1 ENSGALG00000000944 8675 0.94 - - - - - - 0.940 - - - SPT4 homolog, DSIF elongation factor subunit [Source:NCBI gene;Acc:417470]
25. IRX2 ENSGALG00000013193 2170 0.94 - - - - - - 0.940 - - - iroquois homeobox 2 [Source:NCBI gene;Acc:373975]
26. RBM38 ENSGALG00000026081 7115 0.939 - - - - - - 0.939 - - - RNA binding motif protein 38 [Source:NCBI gene;Acc:768866]
27. ARL14EP ENSGALG00000012139 4690 0.939 - - - - - - 0.939 - - - ADP ribosylation factor like GTPase 14 effector protein [Source:NCBI gene;Acc:421605]
28. PPP2R3B ENSGALG00000016702 1538 0.939 - - - - - - 0.939 - - - protein phosphatase 2 regulatory subunit B''beta, transcript variant X5
29. GRSF1 2406 0.938 - - - - - - 0.938 - - - G-rich RNA sequence binding factor 1, transcript variant X2
30. D1A D1A 1026 0.937 - - - - - - 0.937 - - -
31. RBM5 30998 0.937 - - - - - - 0.937 - - - RNA binding motif protein 5, transcript variant X1
32. ZFP91 ENSGALG00000007287 13681 0.934 - - - - - - 0.934 - - - ZFP91 zinc finger protein
33. BMP7 ENSGALG00000007668 6645 0.929 - - - - - - 0.929 - - - bone morphogenetic protein 7 [Source:HGNC Symbol;Acc:HGNC:1074]
34. ARMC1 ENSGALG00000036567 5476 0.928 - - - - - - 0.928 - - - armadillo repeat containing 1 [Source:NCBI gene;Acc:429406]
35. PTRHD1 ENSGALG00000016610 3636 0.927 - - - - - - 0.927 - - - peptidyl-tRNA hydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33782]
36. HSP90B1 ENSGALG00000033789 58910 0.914 - - - - - - 0.914 - - - heat shock protein 90 beta family member 1 [Source:NCBI gene;Acc:374163]
37. EIF3F ENSGALG00000005326 76059 0.898 - - - - - - 0.898 - - - eukaryotic translation initiation factor 3 subunit F
38. HNRNPH3 ENSGALG00000003947 28724 0.895 - - - - - - - 0.895 - - heterogeneous nuclear ribonucleoprotein H3 [Source:NCBI gene;Acc:423686]
39. MLF2 ENSGALG00000014468 45953 0.884 - - - - - - 0.884 - - - myeloid leukemia factor 2 [Source:NCBI gene;Acc:418284]
40. RPL27A ENSGALG00000005948 363481 0.874 - - - - - - 0.874 - - - ribosomal protein L27a [Source:NCBI gene;Acc:770018]
41. TAX1BP3 ENSGALG00000004618 35172 0.854 - - - - - - 0.854 - - - Tax1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:30684]
42. FKBP25 FKBP25 38434 0.784 - - - - - - 0.784 - - -
43. SMARCE1 ENSGALG00000003882 49063 0.741 - - - - 0.741 - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:NCBI gene;Acc:420047]
44. RPS24 ENSGALG00000004871 173117 0.736 - - - - - - 0.736 - - - ribosomal protein S24 [Source:NCBI gene;Acc:423726]
45. SNRPD1 ENSGALG00000041334 219195 0.727 - - - - 0.727 - - - - - small nuclear ribonucleoprotein D1 polypeptide [Source:NCBI gene;Acc:776411]
46. SLC35E2B 7675 0.72 - - - - 0.720 - - - - - solute carrier family 35 member E2B
47. NMD3 ENSGALG00000009533 8726 0.717 - - - - - - 0.717 - - - NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]
48. CIRBP ENSGALG00000030918 309258 0.716 - - - - - 0.716 - - - - cold inducible RNA binding protein [Source:NCBI gene;Acc:425789]
49. MCM5 ENSGALG00000012546 18254 0.713 - - - - 0.713 - - - - - minichromosome maintenance complex component 5 [Source:NCBI gene;Acc:418058]
50. DYL1 ENSGALG00000007153 94287 0.713 - - - - 0.713 - - - - - dynein light chain 1 cytoplasmic [Source:NCBI gene;Acc:427708]
51. MRPL35 ENSGALG00000022950 26070 0.71 - - - - 0.710 - - - - - mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]
52. POLR1E ENSGALG00000005395 8953 0.71 - - - - 0.710 - - - - - RNA polymerase I subunit E [Source:HGNC Symbol;Acc:HGNC:17631]
53. LONP1 ENSGALG00000040492 7133 0.709 - - 0.709 - - - - - - - lon peptidase 1, mitochondrial [Source:HGNC Symbol;Acc:HGNC:9479]
54. OSTC ENSGALG00000010526 19422 0.709 - - - - - - - 0.709 - - oligosaccharyltransferase complex non-catalytic subunit [Source:NCBI gene;Acc:422525]
55. PPP3CB ENSGALG00000005243 8794 0.709 - - - - 0.709 - - - - - Gallus gallus protein phosphatase 3 catalytic subunit beta (PPP3CB), mRNA. [Source:RefSeq mRNA;Acc:NM_001030340]
56. MAP3K7 ENSGALG00000015596 15164 0.708 - - - - 0.708 - - - - - mitogen-activated protein kinase kinase kinase 7 [Source:HGNC Symbol;Acc:HGNC:6859]
57. HSPA8 ENSGALG00000006512 124825 0.707 - - - - - 0.707 - - - - heat shock 70kDa protein 8 [Source:NCBI gene;Acc:395853]
58. RNF8 ENSGALG00000023256 5495 0.703 - - 0.703 - - - - - - - ring finger protein 8 [Source:HGNC Symbol;Acc:HGNC:10071]
59. MRPL18 ENSGALG00000011625 7855 0.702 - - - - - 0.702 - - - - mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]
60. NDE1 ENSGALG00000032590 3277 0.701 - - - - - - - - 0.701 - nudE neurodevelopment protein 1 [Source:NCBI gene;Acc:416597]
61. MORF4L1 ENSGALG00000008146 29940 0.701 - - - - 0.701 - - - - - mortality factor 4 like 1 [Source:NCBI gene;Acc:554283]
62. PPP1CC ENSGALG00000004571 14748 0.701 - - - - 0.701 - - - - - protein phosphatase 1 catalytic subunit gamma [Source:NCBI gene;Acc:416872]
63. TPT1 ENSGALG00000028872 116322 0.7 - - - - - - 0.700 - - - tumor protein, translationally-controlled 1 [Source:NCBI gene;Acc:396363]
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA