Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TXNRD1

Gene Name Gene ID Reads Annotation
TXNRD1 ENSGALG00000035345 4784 Gallus gallus thioredoxin reductase 1 (TXNRD1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352023]











Genes with expression patterns similar to TXNRD1

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TXNRD1 ENSGALG00000035345 4784 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Gallus gallus thioredoxin reductase 1 (TXNRD1), transcript variant 2, mRNA. [Source:RefSeq mRNA;Acc:NM_001352023]
2. C9H2ORF82 ENSGALG00000040264 4201 3.083 - 0.704 0.729 0.937 - - 0.713 - - - chromosome 9 open reading frame, human C2orf82 [Source:NCBI gene;Acc:768774]
3. WWP2 ENSGALG00000000699 5040 2.918 - 0.714 0.736 0.733 - - 0.735 - - - WW domain containing E3 ubiquitin protein ligase 2 [Source:NCBI gene;Acc:415868]
4. TAC1 ENSGALG00000009737 2211 2.456 - 0.751 0.827 0.878 - - - - - - tachykinin precursor 1 [Source:HGNC Symbol;Acc:HGNC:11517]
5. RAB38 ENSGALG00000028018 1046 1.706 - - 0.785 0.921 - - - - - - RAB38, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9776]
6. COL8A1 ENSGALG00000015253 2505 1.677 - 0.732 - 0.945 - - - - - - collagen type VIII alpha 1 chain [Source:NCBI gene;Acc:418378]
7. SAMD3 ENSGALG00000032409 459 1.66 - - - 0.920 - - - - - 0.740 sterile alpha motif domain containing 3 [Source:HGNC Symbol;Acc:HGNC:21574]
8. COL11A1 ENSGALG00000005180 244 1.654 - - - 0.885 - - - - - 0.769 collagen type XI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2186]
9. SCARA3 ENSGALG00000026651 2559 1.627 - - 0.771 0.856 - - - - - - scavenger receptor class A member 3 [Source:HGNC Symbol;Acc:HGNC:19000]
10. T ENSGALG00000011489 2619 1.622 - - 0.722 0.900 - - - - - - T brachyury transcription factor [Source:NCBI gene;Acc:395782]
11. SST ENSGALG00000007361 1383 1.575 - - 0.827 0.748 - - - - - - somatostatin [Source:NCBI gene;Acc:396279]
12. COL9A3 ENSGALG00000005628 2842 1.564 - - 0.754 0.810 - - - - - - collagen type IX alpha 3 chain [Source:NCBI gene;Acc:396242]
13. PARP3 ENSGALG00000004517 331 1.555 - - - - - - 0.723 - 0.832 - poly(ADP-ribose) polymerase family member 3 [Source:HGNC Symbol;Acc:HGNC:273]
14. SPON2 ENSGALG00000038433 1240 1.544 - - - 0.802 - - 0.742 - - - spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]
15. EPB41L3 ENSGALG00000038678 5863 1.536 - - - - - - 0.703 - 0.833 - erythrocyte membrane protein band 4.1 like 3 [Source:HGNC Symbol;Acc:HGNC:3380]
16. LRRTM1 ENSGALG00000015967 85 1.524 - - 0.753 0.771 - - - - - - leucine rich repeat transmembrane neuronal 1 [Source:HGNC Symbol;Acc:HGNC:19408]
17. FAM171B ENSGALG00000002646 837 1.514 - - - 0.810 - - - - 0.704 - family with sequence similarity 171 member B [Source:HGNC Symbol;Acc:HGNC:29412]
18. OSF-2 OSF-2 10433 1.477 - - - 0.726 - - - - - 0.751
19. COL13A1 ENSGALG00000004286 957 1.469 - - - - - - - - 0.749 0.720 collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]
20. SEMA3E ENSGALG00000038225 677 0.935 - - - - - - - - 0.935 - semaphorin 3E [Source:NCBI gene;Acc:374089]
21. FLRT3 ENSGALG00000008716 593 0.904 - - - - - - - - 0.904 - fibronectin leucine rich transmembrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3762]
22. PDXDC1 ENSGALG00000034829 406 0.902 - - - - - - - - 0.902 - pyridoxal dependent decarboxylase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28995]
23. FASTKD3 ENSGALG00000033521 1186 0.9 - - - - - - - - 0.900 - FAST kinase domains 3 [Source:HGNC Symbol;Acc:HGNC:28758]
24. COL9A1 ENSGALG00000015970 3788 0.898 - - - 0.898 - - - - - - collagen type IX alpha 1 chain [Source:NCBI gene;Acc:771873]
25. ODZ2 ODZ2 1380 0.892 - - - - - - - - 0.892 -
26. XPOT ENSGALG00000009835 2953 0.891 - - - - - - - - 0.891 - exportin for tRNA [Source:NCBI gene;Acc:417824]
27. RBBP8 ENSGALG00000014982 3255 0.889 - - - - - - - - 0.889 - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
28. PCLO 249 0.886 - - - - - - - - 0.886 - piccolo presynaptic cytomatrix protein
29. C1orf131 C1orf131 141 0.885 - - - - - - - - 0.885 -
30. CSRNP3 ENSGALG00000010971 539 0.88 - - - - - - - - 0.880 - cysteine and serine rich nuclear protein 3 [Source:HGNC Symbol;Acc:HGNC:30729]
31. FAM120B ENSGALG00000011180 101 0.88 - - - - - - - - 0.880 - family with sequence similarity 120B [Source:HGNC Symbol;Acc:HGNC:21109]
32. SH3D19 ENSGALG00000010081 52 0.879 - - - - - - - - 0.879 - SH3 domain containing 19 [Source:HGNC Symbol;Acc:HGNC:30418]
33. THSD4 ENSGALG00000004087 12 0.876 - - - - - 0.876 - - - - thrombospondin type 1 domain containing 4 [Source:HGNC Symbol;Acc:HGNC:25835]
34. SMAP2 ENSGALG00000029244 498 0.876 - - - - - - - - 0.876 - small ArfGAP2 [Source:NCBI gene;Acc:419641]
35. RS1 ENSGALG00000016523 11 0.876 - - - - - 0.876 - - - - retinoschisin 1 [Source:NCBI gene;Acc:772315]
36. KRT14 ENSGALG00000003690 682 0.876 - - - - - - - - 0.876 - keratin 14 [Source:NCBI gene;Acc:408039]
37. SNCAIP ENSGALG00000005330 2425 0.875 - - - - - - - - 0.875 - synuclein alpha interacting protein [Source:HGNC Symbol;Acc:HGNC:11139]
38. MTSS1 ENSGALG00000041969 1312 0.874 - - - - - - - - 0.874 - MTSS1, I-BAR domain containing [Source:NCBI gene;Acc:420336]
39. RNMTL1 RNMTL1 2889 0.872 - - - - - - - - 0.872 -
40. SLC45A3 ENSGALG00000000703 85 0.871 - - - - - - - - 0.871 - solute carrier family 45 member 3 [Source:HGNC Symbol;Acc:HGNC:8642]
41. GALM ENSGALG00000013828 1546 0.871 - - - - - - - - 0.871 - galactose mutarotase [Source:HGNC Symbol;Acc:HGNC:24063]
42. BACH1 ENSGALG00000015828 114 0.87 - - - - - - - - 0.870 - BTB domain and CNC homolog 1 [Source:HGNC Symbol;Acc:HGNC:935]
43. CUX2 ENSGALG00000004598 231 0.868 - - - - - - - - 0.868 - cut like homeobox 2 [Source:HGNC Symbol;Acc:HGNC:19347]
44. FSTL4 ENSGALG00000031487 529 0.866 - - - - - - - - 0.866 - follistatin like 4 [Source:NCBI gene;Acc:395163]
45. ECM2 ENSGALG00000004695 375 0.862 - - - - - - - - 0.862 - extracellular matrix protein 2 [Source:HGNC Symbol;Acc:HGNC:3154]
46. CARS2 ENSGALG00000016847 3814 0.862 - - - - - - - - 0.862 - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
47. CHRNA7 ENSGALG00000004096 107 0.862 - - - - - - - - 0.862 - cholinergic receptor nicotinic alpha 7 subunit [Source:NCBI gene;Acc:374001]
48. TIMP3 ENSGALG00000028627 8706 0.861 - - - 0.861 - - - - - - TIMP metallopeptidase inhibitor 3 [Source:NCBI gene;Acc:396483]
49. FDFT1 ENSGALG00000016665 3053 0.86 - - - - - - - - 0.860 - farnesyl-diphosphate farnesyltransferase 1 [Source:NCBI gene;Acc:422038]
50. ALMS1 ENSGALG00000044620 570 0.86 - - - - - - - - 0.860 - ALMS1, centrosome and basal body associated protein, transcript variant X1
51. KIAA1217 ENSGALG00000007766 144 0.856 - - - - - - - - 0.856 - KIAA1217 [Source:HGNC Symbol;Acc:HGNC:25428]
52. DCP1B 1306 0.856 - - - - - - - - 0.856 - decapping mRNA 1B
53. SPATA5L1 ENSGALG00000005682 240 0.854 - - - - - - - - 0.854 - spermatogenesis associated 5 like 1 [Source:HGNC Symbol;Acc:HGNC:28762]
54. SLC32A1 ENSGALG00000038919 61 0.853 - - - - - 0.853 - - - - solute carrier family 32 member 1 [Source:HGNC Symbol;Acc:HGNC:11018]
55. DUS2 856 0.85 - - - - - - - - 0.850 - dihydrouridine synthase 2, transcript variant X2
56. WTIP ENSGALG00000025864 75 0.849 - - - - - 0.849 - - - - WT1 interacting protein [Source:HGNC Symbol;Acc:HGNC:20964]
57. GDPD2 ENSGALG00000005842 86 0.849 - - - - - - - - 0.849 - glycerophosphodiester phosphodiesterase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25974]
58. AACS ENSGALG00000002899 960 0.848 - - - - - - - - 0.848 - acetoacetyl-CoA synthetase [Source:NCBI gene;Acc:416811]
59. KLHL15 ENSGALG00000016345 1638 0.848 - - - - - - - - 0.848 - kelch like family member 15 [Source:NCBI gene;Acc:418598]
60. FAM47E-STBD1 FAM47E-STBD1 1148 0.848 - - - - - - - - 0.848 -
61. KCNK10 ENSGALG00000010598 7 0.847 - - - - - 0.847 - - - - potassium two pore domain channel subfamily K member 10 [Source:HGNC Symbol;Acc:HGNC:6273]
62. ATP1B4 ENSGALG00000008593 39 0.847 - - - - - 0.847 - - - - ATPase Na+/K+ transporting family member beta 4 [Source:NCBI gene;Acc:422365]
63. ENSGALG00000028527 ENSGALG00000028527 1 0.847 - - - - - 0.847 - - - -
64. ZMAT3 ENSGALG00000040948 4 0.847 - - - - - 0.847 - - - - zinc finger matrin-type 3 [Source:HGNC Symbol;Acc:HGNC:29983]
65. RRP1B ENSGALG00000035696 12309 0.847 - - - - - - - - 0.847 - ribosomal RNA processing 1B [Source:NCBI gene;Acc:425237]
66. PDC ENSGALG00000030417 4 0.847 - - - - - 0.847 - - - - phosducin [Source:HGNC Symbol;Acc:HGNC:8759]
67. KREMEN1 ENSGALG00000005808 5 0.847 - - - - - 0.847 - - - - kringle containing transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:17550]
68. LRCH3 ENSGALG00000007595 21 0.847 - - - - - 0.847 - - - - leucine rich repeats and calponin homology domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28637]
69. TBX18 ENSGALG00000032789 1768 0.847 - - - - - - - - 0.847 - T-box 18 [Source:NCBI gene;Acc:395104]
70. MFNG ENSGALG00000012442 5 0.847 - - - - - 0.847 - - - - MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:7038]
71. GALNTL6 ENSGALG00000030588 3 0.847 - - - - - 0.847 - - - - polypeptide N-acetylgalactosaminyltransferase-like 6
72. CCR8 ENSGALG00000038069 6 0.847 - - - - - 0.847 - - - - C-C motif chemokine receptor 8 [Source:NCBI gene;Acc:420718]
73. ENSGALG00000026919 ENSGALG00000026919 301 0.847 - - - - - - - - 0.847 -
74. USH2A ENSGALG00000009652 2 0.847 - - - - - 0.847 - - - - usherin, transcript variant X3
75. ICK ENSGALG00000016321 19 0.847 - - - - - 0.847 - - - - intestinal cell kinase [Source:HGNC Symbol;Acc:HGNC:21219]
76. ESYT3 ENSGALG00000012092 13 0.847 - - - - - 0.847 - - - - extended synaptotagmin 3 [Source:HGNC Symbol;Acc:HGNC:24295]
77. ABCC8 ENSGALG00000006172 41 0.846 - - - - - - - - 0.846 - ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]
78. RUFY2 1442 0.845 - - - - - - - - 0.845 - RUN and FYVE domain containing 2, transcript variant X1
79. CDKL1 ENSGALG00000012295 1732 0.845 - - - - - - - - 0.845 - cyclin dependent kinase like 1 [Source:HGNC Symbol;Acc:HGNC:1781]
80. RAD17 ENSGALG00000015571 1374 0.845 - - - - - - - - 0.845 - RAD17 checkpoint clamp loader component [Source:NCBI gene;Acc:404778]
81. PRDM15 ENSGALG00000019178 2729 0.844 - - - - - - - - 0.844 - PR/SET domain 15 [Source:HGNC Symbol;Acc:HGNC:13999]
82. CEP250 ENSGALG00000026151 163 0.843 - - - - - - - - 0.843 - centrosomal protein 250 [Source:HGNC Symbol;Acc:HGNC:1859]
83. LHCGR ENSGALG00000009095 174 0.841 - - - - - - - - 0.841 - luteinizing hormone/choriogonadotropin receptor [Source:NCBI gene;Acc:395776]
84. RHPN2 ENSGALG00000004814 1865 0.84 - - - - - - - - 0.840 - rhophilin Rho GTPase binding protein 2 [Source:HGNC Symbol;Acc:HGNC:19974]
85. ZNF385B ENSGALG00000009012 290 0.84 - - - 0.840 - - - - - - zinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]
86. LRRC59 ENSGALG00000007673 2081 0.84 - - - - - - - - 0.840 - leucine rich repeat containing 59 [Source:NCBI gene;Acc:422103]
87. DTX3L ENSGALG00000012075 399 0.839 - - - - - - - - 0.839 - deltex E3 ubiquitin ligase 3L [Source:HGNC Symbol;Acc:HGNC:30323]
88. ENSGALG00000015888 ENSGALG00000015888 12 0.839 - - - - - 0.839 - - - -
89. TBK1 ENSGALG00000009840 1650 0.837 - - - - - - - - 0.837 - TANK binding kinase 1 [Source:NCBI gene;Acc:417825]
90. NPY7R ENSGALG00000021303 215 0.837 - - - 0.837 - - - - - - neuropeptide Y7 receptor [Source:NCBI gene;Acc:416280]
91. KIAA1324L ENSGALG00000030324 1695 0.837 - - - - - - - - 0.837 - KIAA1324 like [Source:HGNC Symbol;Acc:HGNC:21945]
92. MIB1 ENSGALG00000014974 3583 0.836 - - - - - - - - 0.836 - mindbomb E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:21086]
93. RFFL ENSGALG00000002225 928 0.836 - - - - - - - - 0.836 - ring finger and FYVE like domain containing E3 ubiquitin protein ligase [Source:NCBI gene;Acc:417529]
94. TMEM74 ENSGALG00000041553 398 0.835 - - - - - - - - 0.835 - transmembrane protein 74 [Source:HGNC Symbol;Acc:HGNC:26409]
95. SFXN2 ENSGALG00000008114 2773 0.835 - - - - - - - - 0.835 - sideroflexin 2, transcript variant X6
96. TAF1D ENSGALG00000017220 3012 0.835 - - - - - - - - 0.835 - TATA-box binding protein associated factor, RNA polymerase I subunit D [Source:HGNC Symbol;Acc:HGNC:28759]
97. TMEM269 ENSGALG00000025800 143 0.835 - - - - - - - - 0.835 - transmembrane protein 269 [Source:HGNC Symbol;Acc:HGNC:52381]
98. NTL ENSGALG00000005156 278 0.834 - - - - - - - - 0.834 - neurotrypsin-like, transcript variant X7
99. VWF ENSGALG00000017272 1012 0.834 - - - - - - - - 0.834 - Gallus gallus von Willebrand factor (VWF), mRNA. [Source:RefSeq mRNA;Acc:NM_001318464]
100. MSANTD4 ENSGALG00000017177 3306 0.833 - - - - - - - - 0.833 - Myb/SANT DNA binding domain containing 4 with coiled-coils [Source:HGNC Symbol;Acc:HGNC:29383]

There are 363 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA