Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TXNDC5

Gene Name Gene ID Reads Annotation
TXNDC5 ENSGALG00000012784 4678 thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]











Genes with expression patterns similar to TXNDC5

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TXNDC5 ENSGALG00000012784 4678 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 thioredoxin domain containing 5 [Source:NCBI gene;Acc:420867]
2. SMC6 ENSGALG00000016467 3321 1.88 - - - - - - - 0.938 - 0.942 Gallus gallus structural maintenance of chromosomes 6 (SMC6), mRNA. [Source:RefSeq mRNA;Acc:NM_001321614]
3. ITGA9 ENSGALG00000029378 415 1.87 - - - - - - - 0.954 - 0.916 integrin subunit alpha 9 [Source:NCBI gene;Acc:420757]
4. CKAP2 ENSGALG00000017025 25020 1.858 - - - - - - - 0.932 - 0.926 cytoskeleton associated protein 2 [Source:NCBI gene;Acc:418882]
5. MTERFD1 MTERFD1 3640 1.842 - - - - - - - 0.949 - 0.893
6. SMARCC1 ENSGALG00000032642 4842 1.819 - - - - - - - 0.958 - 0.861 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]
7. KHDRBS1 ENSGALG00000003272 4249 1.799 - - - - - - - 0.946 - 0.853 KH RNA binding domain containing, signal transduction associated 1 [Source:NCBI gene;Acc:374071]
8. ASB9 ENSGALG00000016563 2780 1.75 - - - - - - - 0.850 - 0.900 ankyrin repeat and SOCS box containing 9 [Source:NCBI gene;Acc:418625]
9. CAMSAP2 ENSGALG00000002145 6109 1.731 - - - - - - - 0.926 - 0.805 calmodulin regulated spectrin associated protein family member 2 [Source:HGNC Symbol;Acc:HGNC:29188]
10. MED24 ENSGALG00000013506 5403 1.727 - - - - - - - 0.890 - 0.837 mediator complex subunit 24 [Source:NCBI gene;Acc:426134]
11. UBE2D1 ENSGALG00000021213 5876 1.682 - - - - - - 0.757 0.925 - - ubiquitin conjugating enzyme E2 D1 [Source:NCBI gene;Acc:423641]
12. GXYLT1 ENSGALG00000009532 5682 1.678 - - - - - - 0.741 - - 0.937 glucoside xylosyltransferase 1 [Source:NCBI gene;Acc:417789]
13. MRPL50 ENSGALG00000015543 11649 1.674 - - - - - - 0.759 - - 0.915 mitochondrial ribosomal protein L50 [Source:NCBI gene;Acc:427307]
14. SPG21 ENSGALG00000007262 8050 1.667 - - - - - - - 0.838 - 0.829 SPG21, maspardin [Source:NCBI gene;Acc:415526]
15. ERGIC2 ENSGALG00000007183 12870 1.651 - - - - - - 0.724 0.927 - - ERGIC and golgi 2 [Source:NCBI gene;Acc:417697]
16. NDUFAF1 ENSGALG00000008587 14779 1.648 - - - - - - - 0.909 - 0.739 NADH:ubiquinone oxidoreductase complex assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:18828]
17. RUVBL1 ENSGALG00000005931 9379 1.629 - - - - - - 0.740 0.889 - - RuvB like AAA ATPase 1 [Source:NCBI gene;Acc:416022]
18. N4BP2 ENSGALG00000014281 3144 1.628 - - 0.738 - - - - - - 0.890 NEDD4 binding protein 2, transcript variant X6
19. TSC22D2 ENSGALG00000027591 6594 1.622 - - - - - - 0.703 0.919 - - TSC22 domain family member 2 [Source:HGNC Symbol;Acc:HGNC:29095]
20. GGA.31975 GGA.31975 8825 1.613 - - - - - - 0.752 - - 0.861
21. SMDT1 ENSGALG00000011897 9360 1.611 - - - - - - - 0.904 - 0.707 single-pass membrane protein with aspartate rich tail 1 [Source:HGNC Symbol;Acc:HGNC:25055]
22. UBL3 ENSGALG00000017084 7417 1.597 - - - - - - 0.705 - - 0.892 ubiquitin like 3 [Source:NCBI gene;Acc:418921]
23. CHRAC1 ENSGALG00000040823 5695 1.583 - - - - - - 0.773 - - 0.810 chromatin accessibility complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:13544]
24. HNRNPD ENSGALG00000011184 10686 1.576 - - - - - - - 0.831 - 0.745 heterogeneous nuclear ribonucleoprotein D [Source:NCBI gene;Acc:422602]
25. UPF2 ENSGALG00000033772 9548 1.553 - - - - - - 0.739 - - 0.814 UPF2, regulator of nonsense mediated mRNA decay [Source:HGNC Symbol;Acc:HGNC:17854]
26. BRT-1 BRT-1 26083 1.552 - - - - - - - - 0.733 0.819
27. RPF2 ENSGALG00000037087 12788 1.538 - - - - - - 0.727 - - 0.811 ribosome production factor 2 homolog [Source:HGNC Symbol;Acc:HGNC:20870]
28. NAA30 ENSGALG00000012098 4681 1.535 - - - - - - 0.706 - - 0.829 N(alpha)-acetyltransferase 30, NatC catalytic subunit [Source:HGNC Symbol;Acc:HGNC:19844]
29. COX5A ENSGALG00000014121 55281 1.522 - - - - - - 0.701 - - 0.821 cytochrome c oxidase subunit 5A [Source:HGNC Symbol;Acc:HGNC:2267]
30. RALGAPB ENSGALG00000001420 5112 1.499 - - - - - - - 0.779 - 0.720 Ral GTPase activating protein non-catalytic beta subunit [Source:NCBI gene;Acc:419128]
31. RNPS1 ENSGALG00000009288 13588 1.444 - - - - - - 0.740 0.704 - - RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]
32. TMEM59 ENSGALG00000010746 4669 0.973 - - - - - - - 0.973 - - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
33. KDM4A ENSGALG00000010074 7219 0.973 - - - - - - - 0.973 - - lysine demethylase 4A
34. ZC3H3 ENSGALG00000043265 1638 0.972 - - - - - - - 0.972 - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
35. SRP72 ENSGALG00000011403 13666 0.972 - - - - - - - 0.972 - - signal recognition particle 72 [Source:NCBI gene;Acc:422626]
36. NET1 ENSGALG00000008437 9850 0.972 - - - - - - - 0.972 - - neuroepithelial cell transforming 1 [Source:NCBI gene;Acc:416693]
37. gga-mir-1772 ENSGALG00000025300 2892 0.97 - - - - - - - 0.970 - - gga-mir-1772 [Source:miRBase;Acc:MI0007515]
38. TUBAL3 ENSGALG00000008444 2979 0.969 - - - - - - - 0.969 - - tubulin alpha like 3 [Source:NCBI gene;Acc:416694]
39. BRCC3 ENSGALG00000005383 4844 0.964 - - - - - - - 0.964 - - BRCA1/BRCA2-containing complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:24185]
40. UCK2 ENSGALG00000003510 2512 0.963 - - - - - - - 0.963 - - uridine-cytidine kinase 2 [Source:NCBI gene;Acc:424406]
41. MTMR9 ENSGALG00000016649 2055 0.963 - - - - - - - 0.963 - - myotubularin related protein 9 [Source:NCBI gene;Acc:422033]
42. CC2D2A ENSGALG00000014514 1180 0.963 - - - - - - - 0.963 - - coiled-coil and C2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:29253]
43. RNF214 ENSGALG00000036993 3729 0.963 - - - - - - - 0.963 - - ring finger protein 214 [Source:HGNC Symbol;Acc:HGNC:25335]
44. CHAF1A ENSGALG00000001126 6506 0.963 - - - - - - - 0.963 - - chromatin assembly factor 1 subunit A [Source:NCBI gene;Acc:770217]
45. CARS2 ENSGALG00000016847 3814 0.962 - - - - - - - 0.962 - - cysteinyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25695]
46. SLC25A1 ENSGALG00000041760 4744 0.962 - - - - - - - 0.962 - - solute carrier family 25 member 1, transcript variant X2
47. TFEB ENSGALG00000039878 881 0.961 - - - - - - - 0.961 - - transcription factor EB [Source:NCBI gene;Acc:419922]
48. DUSP14 ENSGALG00000027641 3662 0.961 - - - - - - - 0.961 - - dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]
49. REXO1 ENSGALG00000001043 3179 0.961 - - - - - - - 0.961 - - RNA exonuclease 1 homolog [Source:HGNC Symbol;Acc:HGNC:24616]
50. NR2F2 ENSGALG00000007000 4911 0.961 - - - - - - - 0.961 - - nuclear receptor subfamily 2 group F member 2 [Source:NCBI gene;Acc:386585]
51. STX18 ENSGALG00000015012 1489 0.96 - - - - - - - 0.960 - - syntaxin 18 [Source:NCBI gene;Acc:422848]
52. DNAJA1 ENSGALG00000023066 3820 0.96 - - - - - - - 0.960 - - DnaJ heat shock protein family (Hsp40) member A1 [Source:NCBI gene;Acc:427376]
53. RGS17 ENSGALG00000026034 707 0.959 - - - - - - - 0.959 - - regulator of G protein signaling 17 [Source:NCBI gene;Acc:395645]
54. LIG3 ENSGALG00000002288 7198 0.958 - - - - - - - 0.958 - - DNA ligase 3 [Source:NCBI gene;Acc:417530]
55. CCDC61 ENSGALG00000006714 8066 0.958 - - - - - - - 0.958 - - coiled-coil domain containing 61 [Source:NCBI gene;Acc:424880]
56. APOOL ENSGALG00000006978 1953 0.958 - - - - - - - 0.958 - - apolipoprotein O like [Source:NCBI gene;Acc:422271]
57. ADIPOR1 ENSGALG00000000094 1862 0.958 - - - - - - - 0.958 - - adiponectin receptor 1 [Source:NCBI gene;Acc:421148]
58. PYCR1 ENSGALG00000007300 7987 0.958 - - - - - - - 0.958 - - pyrroline-5-carboxylate reductase 1 [Source:NCBI gene;Acc:769203]
59. DCTN5 ENSGALG00000006088 3113 0.958 - - - - - - - 0.958 - - dynactin subunit 5 [Source:NCBI gene;Acc:416574]
60. NEMF ENSGALG00000012263 2250 0.957 - - - - - - - 0.957 - - nuclear export mediator factor [Source:NCBI gene;Acc:428926]
61. PKP4 ENSGALG00000012561 3087 0.957 - - - - - - - 0.957 - - plakophilin 4 [Source:NCBI gene;Acc:424328]
62. MAST2 ENSGALG00000010313 2975 0.957 - - - - - - - 0.957 - - microtubule associated serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:19035]
63. BTG1L ENSGALG00000004676 2293 0.957 - - - - - - - 0.957 - - protein BTG1-like
64. TCEA1 ENSGALG00000015274 2706 0.956 - - - - - - - 0.956 - - transcription elongation factor A1 [Source:NCBI gene;Acc:421119]
65. TRMT44 ENSGALG00000015594 1490 0.956 - - - - - - - 0.956 - - tRNA methyltransferase 44 homolog [Source:HGNC Symbol;Acc:HGNC:26653]
66. C7orf25 ENSGALG00000040161 694 0.956 - - - - - - - 0.956 - - chromosome 7 open reading frame 25 [Source:HGNC Symbol;Acc:HGNC:21703]
67. ABCA3 ENSGALG00000037837 1606 0.956 - - - - - - - 0.956 - - ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
68. MYH15 ENSGALG00000015358 6304 0.956 - - - - - - - 0.956 - - myosin, heavy chain 15 [Source:NCBI gene;Acc:395534]
69. REV3L ENSGALG00000015033 1917 0.956 - - - - - - - 0.956 - - REV3 like, DNA directed polymerase zeta catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9968]
70. LATS2 4776 0.956 - - - - - - - 0.956 - - large tumor suppressor kinase 2
71. ATP8B4 ENSGALG00000002326 456 0.955 - - - - - - - 0.955 - - ATPase phospholipid transporting 8B4 (putative), transcript variant X4
72. CHMP6 ENSGALG00000026428 18026 0.955 - - - - - - - 0.955 - - charged multivesicular body protein 6 [Source:NCBI gene;Acc:428673]
73. GTDC1 ENSGALG00000012424 1446 0.955 - - - - - - - 0.955 - - glycosyltransferase like domain containing 1 [Source:NCBI gene;Acc:424304]
74. AMMECR1L ENSGALG00000026728 2134 0.954 - - - - - - - 0.954 - - AMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]
75. INOS INOS 313 0.954 - - - - - - - 0.954 - -
76. NGEF ENSGALG00000036327 1048 0.954 - - - - - - - 0.954 - - neuronal guanine nucleotide exchange factor [Source:NCBI gene;Acc:424744]
77. ARRDC4 ENSGALG00000007012 1039 0.954 - - - - - - - 0.954 - - arrestin domain containing 4 [Source:HGNC Symbol;Acc:HGNC:28087]
78. NSRP1 ENSGALG00000004186 1683 0.953 - - - - - - - 0.953 - - nuclear speckle splicing regulatory protein 1 [Source:HGNC Symbol;Acc:HGNC:25305]
79. ALG9 ENSGALG00000021174 745 0.953 - - - - - - - 0.953 - - ALG9, alpha-1,2-mannosyltransferase, transcript variant X5
80. SMIM12 ENSGALG00000030261 5860 0.953 - - - - - - - 0.953 - - small integral membrane protein 12 [Source:NCBI gene;Acc:100858028]
81. DEPDC7 ENSGALG00000011681 1181 0.953 - - - - - - - 0.953 - - DEP domain containing 7 [Source:NCBI gene;Acc:421593]
82. RP9 ENSGALG00000035453 1186 0.953 - - - - - - - 0.953 - - retinitis pigmentosa 9 (autosomal dominant)
83. GOLGB1 ENSGALG00000041494 2376 0.953 - - - - - - - 0.953 - - golgin B1 [Source:HGNC Symbol;Acc:HGNC:4429]
84. FGF18 ENSGALG00000002203 551 0.953 - - - - - - - 0.953 - - fibroblast growth factor 18 [Source:NCBI gene;Acc:395453]
85. UBAC2 ENSGALG00000016880 1343 0.953 - - - - - - - 0.953 - - UBA domain containing 2 [Source:NCBI gene;Acc:418778]
86. HDGFL2 ENSGALG00000027068 1300 0.953 - - - - - - - 0.953 - - HDGF like 2 [Source:NCBI gene;Acc:772302]
87. METTL22 ENSGALG00000033603 696 0.952 - - - - - - - 0.952 - - methyltransferase like 22 [Source:NCBI gene;Acc:425865]
88. EDEM1 ENSGALG00000008320 3117 0.952 - - - - - - - 0.952 - - ER degradation enhancing alpha-mannosidase like protein 1 [Source:NCBI gene;Acc:416110]
89. H3-I H3-I 1498 0.952 - - - - - - - 0.952 - -
90. PNISR ENSGALG00000015483 7711 0.952 - - - - - - - 0.952 - - PNN interacting serine and arginine rich protein [Source:NCBI gene;Acc:421796]
91. PEO1 PEO1 6747 0.952 - - - - - - - 0.952 - -
92. TRIM24 ENSGALG00000012823 2725 0.952 - - - - - - - 0.952 - - tripartite motif containing 24 [Source:HGNC Symbol;Acc:HGNC:11812]
93. gga-mir-1306 ENSGALG00000025271 1231 0.952 - - - - - - - 0.952 - - gga-mir-1306 [Source:miRBase;Acc:MI0007057]
94. WASH1 WASH1 3240 0.951 - - - - - - - 0.951 - -
95. C5orf24 ENSGALG00000006371 1573 0.951 - - - - - - - 0.951 - - chromosome 5 open reading frame 24 [Source:HGNC Symbol;Acc:HGNC:26746]
96. FIGN ENSGALG00000011069 311 0.951 - - - - - - - 0.951 - - fidgetin, microtubule severing factor [Source:HGNC Symbol;Acc:HGNC:13285]
97. RGS9 ENSGALG00000029610 112 0.95 - - - - - - - 0.950 - - regulator of G protein signaling 9 [Source:HGNC Symbol;Acc:HGNC:10004]
98. PHLPP1 ENSGALG00000012888 398 0.95 - - - - - - - 0.950 - - PH domain and leucine rich repeat protein phosphatase 1 [Source:HGNC Symbol;Acc:HGNC:20610]
99. ARFRP1 ENSGALG00000006101 3743 0.95 - - - - - - - 0.950 - - ADP ribosylation factor related protein 1 [Source:HGNC Symbol;Acc:HGNC:662]
100. GLG1 ENSGALG00000039818 6221 0.949 - - - - - - - 0.949 - - golgi glycoprotein 1 [Source:NCBI gene;Acc:396492]

There are 690 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA