Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TVB

Gene Name Gene ID Reads Annotation
TVB TVB 11











Genes with expression patterns similar to TVB

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TVB TVB 11 6 - - 1.000 1.000 - 1.000 1.000 1.000 - 1.000
2. ENSGALG00000009123 ENSGALG00000009123 9 2 - - 1.000 1.000 - - - - - -
3. IL23R IL23R 25 1.882 - - 1.000 - - - - - - 0.882
4. SPAG8 2 1.785 - - - - - - 0.785 1.000 - - sperm associated antigen 8, transcript variant X3
5. ENSGALG00000023934 ENSGALG00000023934 3 1.773 - - 1.000 0.773 - - - - - -
6. DYDC1 ENSGALG00000002432 54 1.734 - - 0.734 - - - - 1.000 - - DPY30 domain containing 1 [Source:NCBI gene;Acc:423627]
7. JAKMIP3 ENSGALG00000010486 2 1.732 - - 0.732 1.000 - - - - - - Janus kinase and microtubule interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:23523]
8. TMEM170B ENSGALG00000012744 24 1.553 - - - - - - 0.785 0.768 - - transmembrane protein 170B [Source:HGNC Symbol;Acc:HGNC:34244]
9. FAM166A ENSGALG00000045172 0 1 - - - - - - - 1.000 - - family with sequence similarity 166 member A [Source:HGNC Symbol;Acc:HGNC:33818]
10. TLX3 ENSGALG00000002191 4 1 - - - 1.000 - - - - - - T cell leukemia homeobox 3 [Source:HGNC Symbol;Acc:HGNC:13532]
11. UMODL1 ENSGALG00000016157 1 1 - - - - - - - - - 1.000 uromodulin like 1 [Source:HGNC Symbol;Acc:HGNC:12560]
12. C3orf83 C3orf83 117 1 - - 1.000 - - - - - - -
13. CDYL2 ENSGALG00000012978 6 1 - - - 1.000 - - - - - - chromodomain Y like 2 [Source:HGNC Symbol;Acc:HGNC:23030]
14. HABP2 ENSGALG00000008905 1 1 - - 1.000 - - - - - - - hyaluronan binding protein 2 [Source:NCBI gene;Acc:423898]
15. SDC4 ENSGALG00000003932 3 1 - - 1.000 - - - - - - - syndecan 4 [Source:NCBI gene;Acc:419184]
16. C1orf170 C1orf170 7 1 - - - 1.000 - - - - - -
17. CCR5 ENSGALG00000037077 23 1 - - - - - - - 1.000 - - C-C motif chemokine receptor 5 [Source:NCBI gene;Acc:420695]
18. MYRFL ENSGALG00000019352 2 1 - - - - - - - 1.000 - - myelin regulatory factor like [Source:HGNC Symbol;Acc:HGNC:26316]
19. DPF3 ENSGALG00000009352 7 1 - - - 1.000 - - - - - - double PHD fingers 3 [Source:NCBI gene;Acc:395351]
20. SVOPL ENSGALG00000012812 27 1 - - - - - - - 1.000 - - SVOP like [Source:HGNC Symbol;Acc:HGNC:27034]
21. GAL4 GAL4 2 1 - - - - - - - 1.000 - -
22. SCN4B ENSGALG00000007409 22 1 - - - 1.000 - - - - - - sodium voltage-gated channel beta subunit 4 [Source:HGNC Symbol;Acc:HGNC:10592]
23. ENSGALG00000001404 ENSGALG00000001404 6 1 - - 1.000 - - - - - - -
24. C8orf37 ENSGALG00000038971 5 1 - - - - - - - 1.000 - - chromosome 8 open reading frame 37 [Source:HGNC Symbol;Acc:HGNC:27232]
25. CD200R1L ENSGALG00000015191 1 1 - - - 1.000 - - - - - - CD200 receptor 1-like, transcript variant X2
26. HHAT ENSGALG00000009881 7 1 - - - - - - - 1.000 - - hedgehog acyltransferase [Source:HGNC Symbol;Acc:HGNC:18270]
27. ACE2 ENSGALG00000016554 7 1 - - 1.000 - - - - - - - angiotensin I converting enzyme 2 [Source:HGNC Symbol;Acc:HGNC:13557]
28. SPARCL1 ENSGALG00000010929 10 1 - - - 1.000 - - - - - - SPARC like 1 [Source:HGNC Symbol;Acc:HGNC:11220]
29. MYH1G ENSGALG00000028612 7 1 - - 1.000 - - - - - - - Gallus gallus myosin, heavy chain 1G, skeletal muscle (MYH1G), mRNA. [Source:RefSeq mRNA;Acc:NM_001319016]
30. gga-mir-7-3 ENSGALG00000018314 1 1 - - 1.000 - - - - - - - gga-mir-7-3 [Source:miRBase;Acc:MI0001269]
31. REEP1 ENSGALG00000015786 7 1 - - - - - - - 1.000 - - receptor accessory protein 1 [Source:HGNC Symbol;Acc:HGNC:25786]
32. WDR63 ENSGALG00000008696 15 1 - - - 1.000 - - - - - - WD repeat domain 63 [Source:HGNC Symbol;Acc:HGNC:30711]
33. EPHA6 ENSGALG00000015418 0 1 - - 1.000 - - - - - - - EPH receptor A6, transcript variant X6
34. PIK3CG ENSGALG00000008081 5 1 - - - 1.000 - - - - - - phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma [Source:NCBI gene;Acc:417706]
35. ENSGALG00000000819 ENSGALG00000000819 13 1 - - - 1.000 - - - - - -
36. OVCH2 ENSGALG00000005318 8 1 - - - - - - - 1.000 - - ovochymase 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:29970]
37. MCAM ENSGALG00000030027 26 1 - - - - - - - 1.000 - - melanoma cell adhesion molecule [Source:NCBI gene;Acc:448832]
38. SLC44A1 ENSGALG00000015439 32 1 - - - - - - - 1.000 - - solute carrier family 44 member 1 [Source:HGNC Symbol;Acc:HGNC:18798]
39. SLC6A19 ENSGALG00000019527 1 1 - - - - - - - - - 1.000 solute carrier family 6 member 19 [Source:HGNC Symbol;Acc:HGNC:27960]
40. MYO7B ENSGALG00000001936 1 1 - - - 1.000 - - - - - - myosin VIIB [Source:HGNC Symbol;Acc:HGNC:7607]
41. CHST9 ENSGALG00000019489 21 1 - - - - - - - - - 1.000 carbohydrate sulfotransferase 9 [Source:HGNC Symbol;Acc:HGNC:19898]
42. gga-mir-99a ENSGALG00000018242 192 1 - - - - - - - 1.000 - - gga-mir-99a [Source:miRBase;Acc:MI0001173]
43. CAMK2A ENSGALG00000005621 3 1 - - - - - - - 1.000 - - calcium/calmodulin dependent protein kinase II alpha [Source:NCBI gene;Acc:374175]
44. PREX1 ENSGALG00000004621 48 1 - - - - - - - 1.000 - - phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:32594]
45. CD36 ENSGALG00000008439 18 1 - - - - - - - - - 1.000 CD36 molecule [Source:NCBI gene;Acc:417730]
46. CBLN4 ENSGALG00000030821 9 1 - - - - - - - - - 1.000 cerebellin 4 precursor [Source:NCBI gene;Acc:769254]
47. SCG5 ENSGALG00000009725 10 1 - - - - - - - - - 1.000 secretogranin V [Source:NCBI gene;Acc:769742]
48. LDHD ENSGALG00000023828 60 1 - - - - - - 1.000 - - - lactate dehydrogenase D [Source:HGNC Symbol;Acc:HGNC:19708]
49. ENSGALG00000026578 ENSGALG00000026578 4 1 - - - - - - - 1.000 - -
50. C10orf107 C10orf107 0 1 - - 1.000 - - - - - - -
51. ATP6V1H ENSGALG00000013621 13 1 - - - - - - - 1.000 - - ATPase H+ transporting V1 subunit H [Source:NCBI gene;Acc:426199]
52. ENSGALG00000005026 ENSGALG00000005026 9 1 - - - - - - - 1.000 - -
53. PDP2 ENSGALG00000005146 1 1 - - - - - - - - - 1.000 pyruvate dehyrogenase phosphatase catalytic subunit 2 [Source:HGNC Symbol;Acc:HGNC:30263]
54. ALDH1A1 ENSGALG00000015147 3 1 - - 1.000 - - - - - - - aldehyde dehydrogenase 1 family member A1 [Source:NCBI gene;Acc:395264]
55. LZTS2 ENSGALG00000023612 9 1 - - - - - - - 1.000 - - leucine zipper tumor suppressor 2 [Source:HGNC Symbol;Acc:HGNC:29381]
56. HOPX ENSGALG00000011404 10 1 - - - - - - - 1.000 - - HOP homeobox [Source:NCBI gene;Acc:395241]
57. uc_2 uc_2 3 1 - - - 1.000 - - - - - -
58. SLCO2A1 ENSGALG00000006471 18 1 - - - - - - - 1.000 - - solute carrier organic anion transporter family member 2A1 [Source:NCBI gene;Acc:424862]
59. HPDL ENSGALG00000023348 1 1 - - - - - - - 1.000 - - 4-hydroxyphenylpyruvate dioxygenase like [Source:HGNC Symbol;Acc:HGNC:28242]
60. SCN10A SCN10A 0 1 - - 1.000 - - - - - - -
61. MIS18A ENSGALG00000015884 25 1 - - - - - - - 1.000 - - MIS18 kinetochore protein A [Source:HGNC Symbol;Acc:HGNC:1286]
62. B3GALT5 ENSGALG00000016128 1 1 - - 1.000 - - - - - - - beta-1,3-galactosyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:920]
63. MCT2L ENSGALG00000007596 127 1 - - - - - - - - - 1.000 monocarboxylate transporter 2-like, transcript variant X5
64. PVRL1 PVRL1 3 1 - - - 1.000 - - - - - -
65. PROZ ENSGALG00000016832 6 1 - - - - - - - 1.000 - - protein Z, vitamin K dependent plasma glycoprotein [Source:HGNC Symbol;Acc:HGNC:9460]
66. HMGCS2 ENSGALG00000002960 54 1 - - - - - - - 1.000 - - 3-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]
67. GRIA4 ENSGALG00000038995 29 1 - - - - - - - 1.000 - - glutamate ionotropic receptor AMPA type subunit 4 [Source:NCBI gene;Acc:396137]
68. PIT-1 PIT-1 8 1 - - - 1.000 - - - - - -
69. SLC10A4 ENSGALG00000033908 300 1 - - - - - - - 1.000 - - solute carrier family 10 member 4 [Source:HGNC Symbol;Acc:HGNC:22980]
70. ST3GAL2 ENSGALG00000002651 20 1 - - - - - - - 1.000 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 2 [Source:NCBI gene;Acc:395139]
71. SLC22A13L ENSGALG00000006018 3 1 - - - - - - - - - 1.000 solute carrier family 22 member 13-like
72. ENSGALG00000026368 ENSGALG00000026368 1 1 - - 1.000 - - - - - - -
73. SLC5A10 ENSGALG00000005083 0 1 - - 1.000 - - - - - - - solute carrier family 5 member 10 [Source:HGNC Symbol;Acc:HGNC:23155]
74. ENSGALG00000025856 ENSGALG00000025856 3 1 - - - - - - - - - 1.000
75. IL2RB ENSGALG00000012472 7 1 - - - - - - - 1.000 - - Gallus gallus interleukin 2 receptor subunit beta (IL2RB), mRNA. [Source:RefSeq mRNA;Acc:NM_001318989]
76. PRSS55 ENSGALG00000016642 1 1 - - - 1.000 - - - - - - protease, serine 55
77. TM4SF1 ENSGALG00000038747 1 1 - - - 1.000 - - - - - - transmembrane 4 L six family member 1 [Source:NCBI gene;Acc:425046]
78. ANKRD42 8 1 - - - - - - - 1.000 - - ankyrin repeat domain 42
79. DNM3 ENSGALG00000033244 6 1 - - - 1.000 - - - - - - dynamin 3 [Source:HGNC Symbol;Acc:HGNC:29125]
80. ENSGALG00000027841 ENSGALG00000027841 44 1 - - 1.000 - - - - - - -
81. FBLN7 ENSGALG00000046358 27 1 - - - - - - 1.000 - - - Gallus gallus fibulin 7 (FBLN7), mRNA. [Source:RefSeq mRNA;Acc:NM_001326496]
82. DMRT3 ENSGALG00000010161 2 1 - - - 1.000 - - - - - - doublesex and mab-3 related transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:13909]
83. ANKFY1 ENSGALG00000001467 21 1 - - - - - - - 1.000 - - ankyrin repeat and FYVE domain containing 1 [Source:HGNC Symbol;Acc:HGNC:20763]
84. HERPUD1 ENSGALG00000001220 18 1 - - - - - - - 1.000 - - homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]
85. SLC1A2 ENSGALG00000037556 22 1 - - - - - - - 1.000 - - solute carrier family 1 member 2 [Source:NCBI gene;Acc:423156]
86. ZNF385C ENSGALG00000003403 9 1 - - - - - - - - - 1.000 zinc finger protein 385C [Source:HGNC Symbol;Acc:HGNC:33722]
87. PLCH2 ENSGALG00000001207 7 1 - - - - - - - 1.000 - - phospholipase C eta 2 [Source:HGNC Symbol;Acc:HGNC:29037]
88. GFRA3 ENSGALG00000007620 1 1 - - - - - - - - - 1.000 GDNF family receptor alpha 3 [Source:HGNC Symbol;Acc:HGNC:4245]
89. GAMT ENSGALG00000040182 5 1 - - - - - - - - - 1.000 guanidinoacetate N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:4136]
90. FKHR FKHR 1 1 - - - 1.000 - - - - - -
91. RGS16 ENSGALG00000033535 139 1 - - - - - - - - - 1.000 regulator of G-protein signaling 16 [Source:NCBI gene;Acc:424409]
92. FBXL22 ENSGALG00000003401 1 1 - - 1.000 - - - - - - - F-box and leucine rich repeat protein 22 [Source:HGNC Symbol;Acc:HGNC:27537]
93. ENSGALG00000026755 ENSGALG00000026755 0 1 - - 1.000 - - - - - - -
94. VSNL1 ENSGALG00000016464 19 1 - - - - - - - 1.000 - - visinin like 1 [Source:NCBI gene;Acc:396189]
95. UTS2 ENSGALG00000000556 0 1 - - - - - - - 1.000 - - urotensin 2 [Source:NCBI gene;Acc:404535]
96. ITM2B ENSGALG00000016996 1112 1 - - - - - - - 1.000 - - integral membrane protein 2B [Source:NCBI gene;Acc:395969]
97. CCDC113 20 1 - - - 1.000 - - - - - - coiled-coil domain containing 113, transcript variant X2
98. NR4A3 ENSGALG00000013568 1 1 - - - - - - - 1.000 - - nuclear receptor subfamily 4 group A member 3 [Source:HGNC Symbol;Acc:HGNC:7982]
99. SFMBT1 ENSGALG00000001753 10 1 - - - 1.000 - - - - - - Scm like with four mbt domains 1 [Source:HGNC Symbol;Acc:HGNC:20255]
100. ZIC4 ENSGALG00000006810 2 1 - - 1.000 - - - - - - - Zic family member 4 [Source:HGNC Symbol;Acc:HGNC:20393]

There are 200 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA