Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for TULP3

Gene Name Gene ID Reads Annotation
TULP3 ENSGALG00000013424 2064 tubby like protein 3 [Source:HGNC Symbol;Acc:HGNC:12425]











Genes with expression patterns similar to TULP3

Nr. Gene Name Gene ID Reads Σ scores E3 embryo E3 aorta E3 anterior slice 1 E3 anterior slice 2 E3 anterior slice 3 E3 posterior slice 1 E3 posterior slice 2 E3 posterior slice 3 E4 anterior slice 1 E4 posterior slice 1 Annotation
1. TULP3 ENSGALG00000013424 2064 10 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tubby like protein 3 [Source:HGNC Symbol;Acc:HGNC:12425]
2. DENND6A ENSGALG00000005656 831 1.541 - - - 0.743 - - - - 0.798 - DENN domain containing 6A [Source:NCBI gene;Acc:416006]
3. BEND3 ENSGALG00000015314 2162 1.536 - - - - - - 0.783 - 0.753 - BEN domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23040]
4. PPFIA1 ENSGALG00000035774 5258 1.509 - - - - - - - 0.796 0.713 - PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]
5. ADAP2 ENSGALG00000003319 134 1.499 - - - 0.792 - - 0.707 - - - ArfGAP with dual PH domains 2 [Source:HGNC Symbol;Acc:HGNC:16487]
6. CRLF3 ENSGALG00000003284 6002 1.484 - - - - - - 0.701 0.783 - - cytokine receptor like factor 3 [Source:NCBI gene;Acc:417407]
7. CCDC77 ENSGALG00000012987 1267 1.479 - - - - - - 0.762 - 0.717 - coiled-coil domain containing 77 [Source:HGNC Symbol;Acc:HGNC:28203]
8. GGT7 ENSGALG00000001062 476 1.475 - - - - - - 0.751 - 0.724 - gamma-glutamyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4259]
9. RBBP8 ENSGALG00000014982 3255 1.471 - - - 0.702 - - 0.769 - - - RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]
10. C4orf27 C4orf27 16724 1.45 - - - - - - - 0.745 0.705 -
11. ACL ACL 1813 0.868 - - - - - - - - 0.868 -
12. HEATR3 ENSGALG00000041613 2704 0.864 - - - - - - 0.864 - - - HEAT repeat containing 3 [Source:NCBI gene;Acc:415734]
13. DEGS1 ENSGALG00000009330 3599 0.862 - - - - - - 0.862 - - - delta 4-desaturase, sphingolipid 1 [Source:NCBI gene;Acc:421327]
14. CARKD CARKD 2914 0.861 - - - - - - - - 0.861 -
15. UPB1 ENSGALG00000006627 139 0.86 - - - - - - - - 0.860 - beta-ureidopropionase 1 [Source:HGNC Symbol;Acc:HGNC:16297]
16. GGA.16412 GGA.16412 846 0.858 - - - - - - - - 0.858 -
17. NUDT14 ENSGALG00000028940 3795 0.854 - - - - - - 0.854 - - - nudix hydrolase 14 [Source:NCBI gene;Acc:423501]
18. CEP104 ENSGALG00000000978 1130 0.85 - - - - - - - - 0.850 - centrosomal protein 104 [Source:HGNC Symbol;Acc:HGNC:24866]
19. RMND5A ENSGALG00000015815 2903 0.844 - - - - - - 0.844 - - - required for meiotic nuclear division 5 homolog A [Source:NCBI gene;Acc:422920]
20. CCDC171 ENSGALG00000015103 349 0.843 - - - - - - - - 0.843 - coiled-coil domain containing 171 [Source:HGNC Symbol;Acc:HGNC:29828]
21. MPPED1 ENSGALG00000014186 5726 0.842 - - - - - - - 0.842 - - metallophosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1306]
22. CGN ENSGALG00000000920 407 0.84 - - - - - - - - 0.840 - cingulin [Source:HGNC Symbol;Acc:HGNC:17429]
23. USP45 ENSGALG00000015478 3101 0.84 - - - - - - 0.840 - - - ubiquitin specific peptidase 45 [Source:NCBI gene;Acc:421793]
24. SMPDL3B ENSGALG00000000737 223 0.84 - - - - - - - - 0.840 - sphingomyelin phosphodiesterase acid like 3B [Source:NCBI gene;Acc:769013]
25. SPG11 ENSGALG00000008180 1890 0.839 - - - 0.839 - - - - - - SPG11, spatacsin vesicle trafficking associated [Source:HGNC Symbol;Acc:HGNC:11226]
26. EFTUD1 EFTUD1 3455 0.839 - - - - - - - - 0.839 -
27. ZC3H3 ENSGALG00000043265 1638 0.839 - - - - - - 0.839 - - - zinc finger CCCH-type containing 3 [Source:NCBI gene;Acc:430349]
28. ENSGALG00000010336 ENSGALG00000010336 16 0.838 - - - 0.838 - - - - - -
29. AIM1 51 0.838 - - - 0.838 - - - - - - absent in melanoma 1, transcript variant X2
30. RYR2 ENSGALG00000010812 95 0.837 - - - 0.837 - - - - - - ryanodine receptor 2 [Source:HGNC Symbol;Acc:HGNC:10484]
31. RPLP1 ENSGALG00000030878 445592 0.836 - - - 0.836 - - - - - - ribosomal protein lateral stalk subunit P1 [Source:NCBI gene;Acc:396262]
32. C8B ENSGALG00000010853 21 0.835 - - - 0.835 - - - - - - Gallus gallus complement C8 beta chain (C8B), mRNA. [Source:RefSeq mRNA;Acc:NM_001321543]
33. MMR1L3 ENSGALG00000008638 26 0.835 - - - 0.835 - - - - - - Gallus gallus macrophage mannose receptor 1-like 3 (MMR1L3), mRNA. [Source:RefSeq mRNA;Acc:NM_001319006]
34. VTI1A ENSGALG00000008880 279 0.835 - - - - - - - - 0.835 - vesicle transport through interaction with t-SNAREs 1A [Source:NCBI gene;Acc:770885]
35. SLC7A6OS ENSGALG00000035575 2878 0.834 - - - - - - - - 0.834 - solute carrier family 7 member 6 opposite strand [Source:NCBI gene;Acc:415621]
36. PROC ENSGALG00000001780 26 0.833 - - - 0.833 - - - - - - protein C, inactivator of coagulation factors Va and VIIIa [Source:NCBI gene;Acc:395085]
37. TRAPPC12 ENSGALG00000016387 2593 0.833 - - - - - - 0.833 - - - trafficking protein particle complex 12 [Source:HGNC Symbol;Acc:HGNC:24284]
38. GRAMD1C ENSGALG00000035629 2494 0.832 - - - - - - 0.832 - - - GRAM domain containing 1C [Source:HGNC Symbol;Acc:HGNC:25252]
39. BFIV21 BFIV21 30 0.832 - - - 0.832 - - - - - -
40. EPB41L4A ENSGALG00000000234 113 0.83 - - - 0.830 - - - - - - erythrocyte membrane protein band 4.1 like 4A [Source:HGNC Symbol;Acc:HGNC:13278]
41. CFAP74 ENSGALG00000001288 54 0.83 - - - 0.830 - - - - - - cilia and flagella associated protein 74 [Source:HGNC Symbol;Acc:HGNC:29368]
42. LEMD3 ENSGALG00000009873 347 0.829 - - - - - - - - 0.829 - LEM domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28887]
43. DDX28 ENSGALG00000003415 979 0.829 - - - - - - - - 0.829 - DEAD-box helicase 28
44. ANKRD28 ENSGALG00000011226 160 0.828 - - - 0.828 - - - - - - ankyrin repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29024]
45. AHSA2 1504 0.827 - - - - - - - - 0.827 - AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
46. ZMYM4 ENSGALG00000002499 435 0.825 - - - 0.825 - - - - - - zinc finger MYM-type containing 4, transcript variant X1
47. RAD52 ENSGALG00000039171 6989 0.825 - - - - - - 0.825 - - - RAD52 homolog, DNA repair protein [Source:NCBI gene;Acc:418152]
48. NUDT6 ENSGALG00000011834 1309 0.824 - - - - - - - - 0.824 - nudix hydrolase 6 [Source:HGNC Symbol;Acc:HGNC:8053]
49. GRIN2A ENSGALG00000007278 17 0.824 - - - 0.824 - - - - - - glutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]
50. ASNS ENSGALG00000009748 11822 0.824 - - - - - - - - 0.824 - asparagine synthetase (glutamine-hydrolyzing) [Source:NCBI gene;Acc:420574]
51. TMEM59 ENSGALG00000010746 4669 0.822 - - - - - - - - 0.822 - transmembrane protein 59 [Source:NCBI gene;Acc:424656]
52. GPSM1 ENSGALG00000001797 943 0.82 - - - - - - - - 0.820 - G protein signaling modulator 1 [Source:HGNC Symbol;Acc:HGNC:17858]
53. TMEM69 ENSGALG00000010279 716 0.82 - - - - - - - - 0.820 - transmembrane protein 69 [Source:HGNC Symbol;Acc:HGNC:28035]
54. PJA2 ENSGALG00000000264 1574 0.82 - - - - - - - - 0.820 - praja ring finger ubiquitin ligase 2, transcript variant X1
55. CHAMP1 ENSGALG00000016813 508 0.82 - - - 0.820 - - - - - - chromosome alignment maintaining phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:20311]
56. FUNDC1 ENSGALG00000028187 10511 0.819 - - - - - - - - 0.819 - FUN14 domain containing 1 [Source:NCBI gene;Acc:418558]
57. SGK1 ENSGALG00000013971 2608 0.819 - - - - - - - - 0.819 - serum/glucocorticoid regulated kinase 1 [Source:NCBI gene;Acc:395133]
58. C10ORF58 C10ORF58 5045 0.819 - - - - - - 0.819 - - -
59. STK17B ENSGALG00000007924 519 0.819 - - - 0.819 - - - - - - serine/threonine kinase 17b [Source:NCBI gene;Acc:424049]
60. CEP120 ENSGALG00000005368 2013 0.818 - - - - - - 0.818 - - - centrosomal protein 120 [Source:HGNC Symbol;Acc:HGNC:26690]
61. CUBN ENSGALG00000008704 21 0.818 - - - 0.818 - - - - - - cubilin [Source:HGNC Symbol;Acc:HGNC:2548]
62. CCDC104 CCDC104 6584 0.817 - - - - - - - - 0.817 -
63. PTPRG ENSGALG00000007177 2341 0.817 - - - - - - 0.817 - - - protein tyrosine phosphatase, receptor type G [Source:NCBI gene;Acc:374208]
64. PDLIM1 ENSGALG00000005422 3385 0.817 - - - - - - 0.817 - - - PDZ and LIM domain 1 [Source:HGNC Symbol;Acc:HGNC:2067]
65. DLG3 ENSGALG00000041900 3016 0.817 - - - - - - - - 0.817 - discs large MAGUK scaffold protein 3 [Source:HGNC Symbol;Acc:HGNC:2902]
66. KIAA0319L ENSGALG00000002445 75 0.817 - - - 0.817 - - - - - - KIAA0319 like [Source:HGNC Symbol;Acc:HGNC:30071]
67. FADS1 ENSGALG00000007127 5231 0.817 - - - - - - 0.817 - - - fatty acid desaturase 1
68. EMC8 ENSGALG00000005744 9422 0.817 - - - - - - 0.817 - - - ER membrane protein complex subunit 8
69. DYNLT3 ENSGALG00000016259 340 0.817 - - - - - - - - 0.817 - dynein light chain Tctex-type 3 [Source:NCBI gene;Acc:418580]
70. NBR1 ENSGALG00000002765 629 0.816 - - - - - - - - 0.816 - NBR1, autophagy cargo receptor [Source:HGNC Symbol;Acc:HGNC:6746]
71. ARL14EP ENSGALG00000012139 4690 0.816 - - - - - - - - 0.816 - ADP ribosylation factor like GTPase 14 effector protein [Source:NCBI gene;Acc:421605]
72. C16orf93 C16orf93 3351 0.815 - - - - - - - - 0.815 -
73. LSM6 ENSGALG00000009985 18582 0.813 - - - - - - 0.813 - - - LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:NCBI gene;Acc:422466]
74. CHRDL1 ENSGALG00000008072 711 0.813 - - - 0.813 - - - - - - chordin like 1 [Source:NCBI gene;Acc:373985]
75. TMC7 ENSGALG00000006889 125 0.812 - - - 0.812 - - - - - - transmembrane channel like 7 [Source:NCBI gene;Acc:416610]
76. PDCD4 ENSGALG00000008700 574 0.811 - - - - - - - - 0.811 - programmed cell death 4 [Source:NCBI gene;Acc:374191]
77. C3orf38 ENSGALG00000015402 1395 0.811 - - - - - - 0.811 - - - chromosome 3 open reading frame 38 [Source:HGNC Symbol;Acc:HGNC:28384]
78. PDHB ENSGALG00000029576 12254 0.81 - - - - - - 0.810 - - - pyruvate dehydrogenase (lipoamide) beta [Source:NCBI gene;Acc:416066]
79. OPTN ENSGALG00000013738 1024 0.81 - - - - - - 0.810 - - - optineurin [Source:NCBI gene;Acc:374079]
80. KIF1B ENSGALG00000002726 461 0.809 - - - 0.809 - - - - - - kinesin family member 1B [Source:HGNC Symbol;Acc:HGNC:16636]
81. CDERMO-1 CDERMO-1 279 0.809 - - - - - - - - 0.809 -
82. MADD ENSGALG00000008181 2273 0.809 - - - - - - 0.809 - - - MAP kinase activating death domain [Source:HGNC Symbol;Acc:HGNC:6766]
83. RASAL2 ENSGALG00000004323 55 0.808 - - - 0.808 - - - - - - RAS protein activator like 2 [Source:HGNC Symbol;Acc:HGNC:9874]
84. BEAN1 ENSGALG00000005266 1359 0.808 - - - - - - - - 0.808 - brain expressed, associated with NEDD4, 1 [Source:NCBI gene;Acc:415796]
85. CCDC109B CCDC109B 3222 0.807 - - - - - - 0.807 - - -
86. AKTIP ENSGALG00000033378 1991 0.807 - - - - - - - - 0.807 - AKT interacting protein [Source:NCBI gene;Acc:415720]
87. GSTA GSTA 3130 0.807 - - - - - - - - 0.807 -
88. DDX49 ENSGALG00000003130 5216 0.807 - - - - - - 0.807 - - - DEAD-box helicase 49 [Source:NCBI gene;Acc:420116]
89. ANAPC7 ENSGALG00000003826 5484 0.807 - - - - - - 0.807 - - - anaphase promoting complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:17380]
90. TATDN3 ENSGALG00000009811 1851 0.806 - - - - - - - - 0.806 - TatD DNase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:27010]
91. CSRP2BP CSRP2BP 4679 0.806 - - - - - - 0.806 - - -
92. FAM175A 2036 0.805 - - - - - - 0.805 - - - family with sequence similarity 175 member A, transcript variant X1
93. DARS ENSGALG00000012355 2887 0.804 - - - - - - - - 0.804 - aspartyl-tRNA synthetase [Source:NCBI gene;Acc:424296]
94. FAM221A ENSGALG00000010977 695 0.803 - - - - - - - - 0.803 - family with sequence similarity 221 member A [Source:HGNC Symbol;Acc:HGNC:27977]
95. IPO8 ENSGALG00000012953 499 0.803 - - - - - - - - 0.803 - importin 8 [Source:HGNC Symbol;Acc:HGNC:9853]
96. TYSND1 ENSGALG00000033807 716 0.803 - - - - - - - - 0.803 - trypsin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28531]
97. NCF1 ENSGALG00000001189 334 0.802 - - - - - - - - 0.802 - neutrophil cytosolic factor 1 [Source:NCBI gene;Acc:417485]
98. MRPS14 ENSGALG00000030028 1987 0.801 - - - 0.801 - - - - - - mitochondrial ribosomal protein S14 [Source:NCBI gene;Acc:424436]
99. SNRNP25 ENSGALG00000026559 2097 0.8 - - - - - - 0.800 - - - small nuclear ribonucleoprotein U11/U12 subunit 25 [Source:HGNC Symbol;Acc:HGNC:14161]
100. CLCN7 ENSGALG00000030826 3173 0.8 - - - - - - - - 0.800 - chloride voltage-gated channel 7 [Source:NCBI gene;Acc:416656]

There are 439 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA